FFCP PHASE1:Hg19::chr4:718943..718952,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10336 | |EntrezGene=10336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10066 | |HGNC=10066 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3G7 | |UniProt=C9J3G7 | ||
|association_with_transcript=47bp_to_ENST00000433814_5end | |||
|cluster_id=chr4:718943..718952,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_10_at_PCGF3_5end | |||
|id=chr4:718943..718952,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!1.43e-41!12;UBERON:0002028!1.43e-41!12;UBERON:0007277!1.43e-41!12;UBERON:0004732!2.10e-38!13;UBERON:0002680!8.00e-36!9;UBERON:0001895!8.00e-36!9;UBERON:0010092!8.00e-36!9;UBERON:0003076!2.48e-33!15;UBERON:0003057!2.48e-33!15;UBERON:0002037!9.21e-31!6;UBERON:0006215!9.21e-31!6;UBERON:0001049!3.18e-27!57;UBERON:0005068!3.18e-27!57;UBERON:0006241!3.18e-27!57;UBERON:0007135!3.18e-27!57;UBERON:0002616!2.61e-26!59;UBERON:0001017!3.86e-23!82;UBERON:0003075!2.49e-22!86;UBERON:0007284!2.49e-22!86;UBERON:0000955!3.43e-22!69;UBERON:0006238!3.43e-22!69;UBERON:0005743!4.49e-22!86;UBERON:0002346!2.46e-21!90;UBERON:0002702!2.82e-21!1;UBERON:0002581!7.72e-21!1;UBERON:0000073!5.39e-20!94;UBERON:0001016!5.39e-20!94;UBERON:0007023!8.29e-17!115;UBERON:0001872!1.42e-16!5;UBERON:0001950!2.40e-15!20;UBERON:0000200!3.71e-14!6;UBERON:0002619!4.75e-14!22;UBERON:0000956!1.78e-12!25;UBERON:0000203!1.78e-12!25;UBERON:0000033!1.91e-12!123;UBERON:0000153!7.46e-12!129;UBERON:0007811!7.46e-12!129;UBERON:0001870!2.47e-11!2;UBERON:0002360!3.02e-11!2;UBERON:0000094!3.02e-11!2;UBERON:0007645!3.02e-11!2;UBERON:0004121!4.34e-11!169;UBERON:0002298!6.94e-11!8;UBERON:0000924!7.96e-11!173;UBERON:0006601!7.96e-11!173;UBERON:0001869!6.61e-10!32;UBERON:0002791!1.26e-09!33;UBERON:0002020!2.33e-09!34;UBERON:0003528!2.33e-09!34;UBERON:0001893!2.33e-09!34;UBERON:0001896!5.93e-08!3;UBERON:0005290!5.93e-08!3;UBERON:0010096!5.93e-08!3;UBERON:0000988!6.78e-08!3;UBERON:0002780!7.50e-08!41;UBERON:0001890!7.50e-08!41;UBERON:0006240!7.50e-08!41;UBERON:0000025!8.57e-08!194;UBERON:0003080!1.12e-07!42;UBERON:0000064!7.70e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.26e-09;53!UBERON:0002616;8.26e-09;53!UBERON:0001016;9.28e-08;83!UBERON:0000955;1.68e-07;68!UBERON:0001017;8.51e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p10@PCGF3 | |||
}} | }} |
Latest revision as of 11:43, 18 September 2015
Short description: | p10@PCGF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PCGF3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 47bp_to_ENST00000433814_5end |
EntrezGene: | PCGF3 |
HGNC: | 10066 |
UniProt: | C9J3G7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |