FFCP PHASE1:Hg19::chr3:47029428..47029437,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23218 | |EntrezGene=23218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=31928 | |HGNC=31928 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZK6,Q6ZNJ1 | |UniProt=C9IZK6,Q6ZNJ1 | ||
|association_with_transcript=-47bp_to_ENST00000296147,uc003cqq.1_5end | |association_with_transcript=-47bp_to_ENST00000296147,uc003cqq.1_5end | ||
|cluster_id=chr3:47029428..47029437,+ | |||
|description=CAGE_peak_11_at_NBEAL2_5end | |description=CAGE_peak_11_at_NBEAL2_5end | ||
|id=chr3:47029428..47029437,+ | |id=chr3:47029428..47029437,+ | ||
|ontology_enrichment_celltype=CL:0000945;1.10e-10;24!CL:0002127;1.01e-08;1!CL:0000911;1.01e-08;1!CL:0000814;1.01e-08;1!CL:0000542;5.64e-07;53!CL:0000097;8.15e-07;5 | |ontology_enrichment_celltype=CL:0002032!6.47e-26!165;CL:0000837!6.47e-26!165;CL:0000037!6.57e-26!172;CL:0000566!6.57e-26!172;CL:0000988!3.41e-23!182;CL:0000838!1.39e-19!52;CL:0000542!5.22e-19!53;CL:0000051!5.22e-19!53;CL:0000738!7.30e-19!140;CL:0002031!1.66e-18!124;CL:0002087!7.76e-16!119;CL:0000084!1.68e-14!25;CL:0000827!1.68e-14!25;CL:0000763!1.24e-09!112;CL:0000049!1.24e-09!112;CL:0000791!1.42e-09!18;CL:0000789!1.42e-09!18;CL:0002420!1.42e-09!18;CL:0002419!1.42e-09!18;CL:0000790!1.42e-09!18;CL:0000624!1.54e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000945;1.10e-10;24!CL:0002127;1.01e-08;1!CL:0000911;1.01e-08;1!CL:0000814;1.01e-08;1!CL:0000542;5.64e-07;53!CL:0000097;8.15e-07;5 | ||
|ontology_enrichment_disease=DOID:1036;2.12e-15;8!DOID:2531;2.15e-12;51!DOID:0060083;2.15e-12;51!DOID:1240;3.31e-12;39!DOID:0060085;1.01e-08;1!DOID:4960;1.01e-08;1!DOID:3165;1.01e-08;1!DOID:0060121;1.01e-08;1!DOID:2438;1.01e-08;1!DOID:0070004;1.01e-08;1!DOID:4418;1.01e-08;1!DOID:8692;2.39e-08;31 | |ontology_enrichment_celltype_v019_2=CL:0002032,1.50e-16,161;CL:0000837,1.50e-16,161;CL:0000037,1.05e-15,168;CL:0000988,1.03e-14,177;CL:0000838,1.09e-12,52;CL:0000542,2.04e-12,53;CL:0000051,2.04e-12,53;CL:0000945,6.31e-11,24;CL:0000826,6.31e-11,24;CL:0002031,2.20e-09,120;CL:0000738,2.21e-09,136;CL:0002127,1.65e-08,1;CL:0000914,1.65e-08,1;CL:0000911,1.65e-08,1;CL:0000814,1.65e-08,1;CL:0002042,1.65e-08,1;CL:0002039,1.65e-08,1;CL:0002040,1.65e-08,1;CL:0002041,1.65e-08,1;CL:0002087,4.37e-07,115 | ||
|ontology_enrichment_uberon=UBERON:0001736;1.01e-08;1 | |ontology_enrichment_development_v019=UBERON:0006298;1.01e-08;1!CL:0000051;5.64e-07;53 | ||
|ontology_enrichment_disease=DOID:2531!6.35e-19!51;DOID:0060083!6.35e-19!51;DOID:1240!1.41e-12!39;DOID:8692!8.34e-10!31;DOID:0060058!1.02e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.12e-15;8!DOID:2531;2.15e-12;51!DOID:0060083;2.15e-12;51!DOID:1240;3.31e-12;39!DOID:0060085;1.01e-08;1!DOID:4960;1.01e-08;1!DOID:3165;1.01e-08;1!DOID:0060121;1.01e-08;1!DOID:2438;1.01e-08;1!DOID:0070004;1.01e-08;1!DOID:4418;1.01e-08;1!DOID:8692;2.39e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.03e-16,51;DOID:0060083,8.03e-16,51;DOID:1036,1.27e-15,8;DOID:1240,3.79e-14,39;DOID:0060085,5.28e-09,1;DOID:3165,5.28e-09,1;DOID:0060121,5.28e-09,1;DOID:2438,5.28e-09,1;DOID:4418,5.28e-09,1;DOID:4960,9.02e-09,1;DOID:0070004,9.02e-09,1;DOID:8692,2.44e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.08e-08!7;UBERON:0002390!3.01e-07!102;UBERON:0003061!3.01e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;1.01e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,9.74e-09,1;UBERON:0006298,9.74e-09,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20936304141395,1.9704141467987,1.73163718890094,0,0.383829398097213,0.309632246632152,0,0.30120591877825,0,0.46480320348181,0,0,1.10799081706375,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.580418477257168,0.56738522469114,0.622822248995575,0.75374599577023,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0.83593247695339,0.32592226663359,0,0,0.891283655081389,0.589211814949674,0.886135578334485,0.812411591295047,1.0247305578054,0.520237390239513,0.822189523018381,0.552700035571697,0.289803085735052,0,0,0,0.566546713487831,0.383220493601921,0,0.759059076058509,0,1.30216690771284,0,0.150575119077773,0.639933055772092,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.609868530647977,0.132529768321485,0.813357600086629,0.207322110030741,0.504641701751257,0.72995471815166,0,0,1.38134921352481,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0.109750285408626,1.1240175325762,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.616339038092582,1.24396869324463,0.576479813667846,1.13618190083742,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0,0,5.9832291840805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0,0.284567373393656,0.159426272728822,0,0,0,0,0.280797178113459,0.456469358066384,0.783399478865116,2.50634477090067,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.390776190804081,1.11362469558097,0,0.540911356951966,0,0,0,0,0,1.22587722705226,0,0,0,0,0,0,0,0.824019371133798,0,0,0.552567831062295,0,0,1.72318727645497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0,1.80476528493745,3.33306308340157,3.02078856556517,1.51802986179348,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0,0,0,0,0.193978032976839,0,0,0.548167698587004,1.78843150532691,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0.828478110694391,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,0,0.633936370075881,0.19998739585493,0.426766918776564,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.392600934460972,0.243835849964539,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.193373663920732,0.699588091474503,0,1.05868461514708,0,0,1.37618785021362,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0.0645889098360061,0.744896571550295,0,0,0,0,0,0.471464371102113,0.286888821570705,0,0,0,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | ||
|short_description=p11@NBEAL2 | |short_description=p11@NBEAL2 | ||
}} | }} |
Latest revision as of 12:06, 18 September 2015
Short description: | p11@NBEAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_NBEAL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000296147, uc003cqq.1_5end |
EntrezGene: | NBEAL2 |
HGNC: | 31928 |
UniProt: | C9IZK6Q6ZNJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.50e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-16 | 161 |
hematopoietic stem cell | 1.05e-15 | 168 |
hematopoietic cell | 1.03e-14 | 177 |
lymphoid lineage restricted progenitor cell | 1.09e-12 | 52 |
lymphocyte | 2.04e-12 | 53 |
common lymphoid progenitor | 2.04e-12 | 53 |
lymphocyte of B lineage | 6.31e-11 | 24 |
pro-B cell | 6.31e-11 | 24 |
hematopoietic lineage restricted progenitor cell | 2.20e-09 | 120 |
leukocyte | 2.21e-09 | 136 |
innate effector T cell | 1.65e-08 | 1 |
immature NK T cell | 1.65e-08 | 1 |
effector T cell | 1.65e-08 | 1 |
mature NK T cell | 1.65e-08 | 1 |
immature NK T cell stage IV | 1.65e-08 | 1 |
immature NK T cell stage I | 1.65e-08 | 1 |
immature NK T cell stage II | 1.65e-08 | 1 |
immature NK T cell stage III | 1.65e-08 | 1 |
nongranular leukocyte | 4.37e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 9.74e-09 | 1 |
submandibular gland primordium | 9.74e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.03e-16 | 51 |
immune system cancer | 8.03e-16 | 51 |
chronic leukemia | 1.27e-15 | 8 |
leukemia | 3.79e-14 | 39 |
organ system benign neoplasm | 5.28e-09 | 1 |
skin benign neoplasm | 5.28e-09 | 1 |
integumentary system benign neoplasm | 5.28e-09 | 1 |
dermis tumor | 5.28e-09 | 1 |
cutaneous fibrous histiocytoma | 5.28e-09 | 1 |
bone marrow cancer | 9.02e-09 | 1 |
myeloma | 9.02e-09 | 1 |
myeloid leukemia | 2.44e-08 | 31 |