FFCP PHASE1:Hg19::chr19:44303031..44303053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284348 | |EntrezGene=284348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26397 | |HGNC=26397 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_BC044237_5end | |association_with_transcript=-12bp_to_BC044237_5end | ||
|cluster_id=chr19:44303031..44303053,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_6_at_LYPD5_5end | |description=CAGE_peak_6_at_LYPD5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.89e-12;3 | |ontology_enrichment_celltype_v019=CL:0002567;2.89e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!UBERON:0006215;2.89e-12;3 | |ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!UBERON:0006215;2.89e-12;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0002680;1.41e-15;9!UBERON:0001895;1.41e-15;9!UBERON:0003135;4.00e-13;11!UBERON:0000988;2.89e-12;3!UBERON:0004733;6.00e-12;12!UBERON:0002028;6.00e-12;12!UBERON:0004732;4.15e-11;13!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22!UBERON:0002037;8.97e-07;6!UBERON:0002298;8.97e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0002680;1.41e-15;9!UBERON:0001895;1.41e-15;9!UBERON:0003135;4.00e-13;11!UBERON:0000988;2.89e-12;3!UBERON:0004733;6.00e-12;12!UBERON:0002028;6.00e-12;12!UBERON:0004732;4.15e-11;13!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22!UBERON:0002037;8.97e-07;6!UBERON:0002298;8.97e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0002680,1.31e-15,9;UBERON:0001895,1.31e-15,9;UBERON:0010092,1.31e-15,9;UBERON:0003135,4.00e-13,11;UBERON:0000988,2.89e-12,3;UBERON:0004733,5.67e-12,12;UBERON:0002028,5.67e-12,12;UBERON:0007277,5.67e-12,12;UBERON:0004732,3.94e-11,13;UBERON:0003076,8.85e-10,15;UBERON:0003057,8.85e-10,15;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0002037,8.48e-07,6;UBERON:0006215,8.48e-07,6;UBERON:0002298,8.97e-07,6 | |||
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| ||
|short_description=p6@LYPD5 | |short_description=p6@LYPD5 | ||
}} | }} |
Latest revision as of 12:28, 18 September 2015
Short description: | p6@LYPD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LYPD5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -12bp_to_BC044237_5end |
EntrezGene: | LYPD5 |
HGNC: | 26397 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
regional part of metencephalon | 1.31e-15 | 9 |
metencephalon | 1.31e-15 | 9 |
future metencephalon | 1.31e-15 | 9 |
male reproductive organ | 4.00e-13 | 11 |
pons | 2.89e-12 | 3 |
segmental subdivision of hindbrain | 5.67e-12 | 12 |
hindbrain | 5.67e-12 | 12 |
presumptive hindbrain | 5.67e-12 | 12 |
segmental subdivision of nervous system | 3.94e-11 | 13 |
posterior neural tube | 8.85e-10 | 15 |
chordal neural plate | 8.85e-10 | 15 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
cerebellum | 8.48e-07 | 6 |
rhombic lip | 8.48e-07 | 6 |
brainstem | 8.97e-07 | 6 |