FFCP PHASE1:Hg19::chr4:74285282..74285302,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000495173_5end | |association_with_transcript=18bp_to_ENST00000495173_5end | ||
|cluster_id=chr4:74285282..74285302,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_26_at_ALB_5end | |description=CAGE_peak_26_at_ALB_5end | ||
|id=chr4:74285282..74285302,+ | |id=chr4:74285282..74285302,+ | ||
|ontology_enrichment_celltype=CL:0000181!8.50e-29!12;CL:0000417!8.50e-29!12;CL:0000668!8.50e-29!12;CL:0000414!8.50e-29!12;CL:0000412!8.50e-29!12;CL:0000182!8.50e-29!12;CL:0000223!2.41e-07!59 | |ontology_enrichment_celltype=CL:0000181!8.50e-29!12;CL:0000417!8.50e-29!12;CL:0000668!8.50e-29!12;CL:0000414!8.50e-29!12;CL:0000412!8.50e-29!12;CL:0000182!8.50e-29!12;CL:0000223!2.41e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.58e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.58e-59,12;CL:0000223,2.97e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.92e-44;11!UBERON:0009497;1.14e-37;13!UBERON:0001041;1.74e-16;30!UBERON:0003104;6.35e-16;31!CL:0000223;3.52e-09;58 | |||
|ontology_enrichment_disease=DOID:178!9.97e-11!1;DOID:326!9.97e-11!1;DOID:3978!9.97e-11!1;DOID:3394!9.97e-11!1;DOID:5844!9.97e-11!1 | |ontology_enrichment_disease=DOID:178!9.97e-11!1;DOID:326!9.97e-11!1;DOID:3978!9.97e-11!1;DOID:3394!9.97e-11!1;DOID:5844!9.97e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.54e-32!19;UBERON:0006925!9.54e-32!19;UBERON:0008836!9.54e-32!19;UBERON:0005057!6.91e-29!26;UBERON:0008835!2.68e-27!22;UBERON:0003894!2.68e-27!22;UBERON:0009854!4.50e-26!23;UBERON:0007499!6.48e-24!25;UBERON:0009497!6.48e-24!25;UBERON:0000015!6.48e-24!25;UBERON:0002423!6.48e-24!25;UBERON:0006235!6.48e-24!25;UBERON:0004161!6.48e-24!25;UBERON:0009856!5.84e-23!26;UBERON:0002365!4.16e-19!31;UBERON:0002330!4.16e-19!31;UBERON:0002368!8.16e-17!35;UBERON:0005172!4.90e-16!55;UBERON:0005173!4.90e-16!55;UBERON:0002417!2.57e-14!61;UBERON:0000916!2.57e-14!61;UBERON:0002240!1.50e-13!3;UBERON:0003929!2.57e-13!54;UBERON:0000949!7.32e-13!45;UBERON:0005177!5.21e-11!107;UBERON:0002038!1.33e-10!1;UBERON:0009661!1.33e-10!1;UBERON:0002530!1.43e-09!59;UBERON:0005174!1.72e-08!5;UBERON:0001137!1.72e-08!5;UBERON:0005911!2.43e-08!82;UBERON:0009569!4.80e-07!113;UBERON:0001041!9.27e-07!98 | |ontology_enrichment_uberon=UBERON:0002107!9.54e-32!19;UBERON:0006925!9.54e-32!19;UBERON:0008836!9.54e-32!19;UBERON:0005057!6.91e-29!26;UBERON:0008835!2.68e-27!22;UBERON:0003894!2.68e-27!22;UBERON:0009854!4.50e-26!23;UBERON:0007499!6.48e-24!25;UBERON:0009497!6.48e-24!25;UBERON:0000015!6.48e-24!25;UBERON:0002423!6.48e-24!25;UBERON:0006235!6.48e-24!25;UBERON:0004161!6.48e-24!25;UBERON:0009856!5.84e-23!26;UBERON:0002365!4.16e-19!31;UBERON:0002330!4.16e-19!31;UBERON:0002368!8.16e-17!35;UBERON:0005172!4.90e-16!55;UBERON:0005173!4.90e-16!55;UBERON:0002417!2.57e-14!61;UBERON:0000916!2.57e-14!61;UBERON:0002240!1.50e-13!3;UBERON:0003929!2.57e-13!54;UBERON:0000949!7.32e-13!45;UBERON:0005177!5.21e-11!107;UBERON:0002038!1.33e-10!1;UBERON:0009661!1.33e-10!1;UBERON:0002530!1.43e-09!59;UBERON:0005174!1.72e-08!5;UBERON:0001137!1.72e-08!5;UBERON:0005911!2.43e-08!82;UBERON:0009569!4.80e-07!113;UBERON:0001041!9.27e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.48e-66;19!UBERON:0006925;7.48e-66;19!UBERON:0002423;4.76e-50;25!UBERON:0002365;8.25e-39;31!UBERON:0002330;8.25e-39;31!UBERON:0002368;3.08e-34;33!UBERON:0000949;5.27e-25;43!UBERON:0005172;6.51e-15;52!UBERON:0005173;6.51e-15;52!UBERON:0002417;4.45e-13;58!UBERON:0000916;4.45e-13;58!UBERON:0002530;6.12e-13;57!UBERON:0001007;4.03e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.48e-66,19;UBERON:0006925,7.48e-66,19;UBERON:0008836,7.48e-66,19;UBERON:0008835,7.10e-57,22;UBERON:0003894,7.10e-57,22;UBERON:0009854,2.11e-54,23;UBERON:0007499,4.76e-50,25;UBERON:0009497,4.76e-50,25;UBERON:0000015,4.76e-50,25;UBERON:0002423,4.76e-50,25;UBERON:0006235,4.76e-50,25;UBERON:0004161,4.76e-50,25;UBERON:0009856,4.02e-48,26;UBERON:0002365,2.37e-40,31;UBERON:0002330,2.37e-40,31;UBERON:0002368,9.92e-36,35;UBERON:0000949,9.25e-28,45;UBERON:0003929,4.20e-23,54;UBERON:0005172,4.20e-23,54;UBERON:0005173,4.20e-23,54;UBERON:0002530,3.98e-21,59;UBERON:0002417,9.03e-21,60;UBERON:0000916,9.03e-21,60;UBERON:0005911,3.99e-15,82;UBERON:0001041,3.08e-14,87;UBERON:0005177,3.23e-12,101;UBERON:0009569,5.57e-11,112;UBERON:0003914,1.71e-10,117;UBERON:0004921,2.60e-10,118;UBERON:0005256,4.78e-10,122;UBERON:0001007,2.53e-08,145;UBERON:0001555,2.53e-08,145;UBERON:0007026,2.53e-08,145;UBERON:0000490,3.32e-08,148;UBERON:0001048,1.49e-07,160;UBERON:0003104,1.49e-07,160;UBERON:0009142,1.49e-07,160;UBERON:0004119,1.67e-07,160;UBERON:0000925,1.67e-07,160;UBERON:0006595,1.67e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,95.0662761163731,23.587853200263,27.1763357073446,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3598995275557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1237931825431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,2.36349546921671,1.56590130924216,1.95470277177136,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0172831616028,15.9008266694666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,95.0662761163731,23.587853200263,27.1763357073446,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3598995275557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1237931825431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,2.36349546921671,1.56590130924216,1.95470277177136,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0172831616028,15.9008266694666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p26@ALB | |short_description=p26@ALB | ||
}} | }} |
Latest revision as of 13:21, 18 September 2015
Short description: | p26@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 18bp_to_ENST00000495173_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.58e-59 | 12 |
endodermal cell | 2.97e-12 | 58 |