FFCP PHASE1:Hg19::chr11:60623407..60623412,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11251 | |EntrezGene=11251 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4502 | |HGNC=4502 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5Y4 | |UniProt=Q9Y5Y4 | ||
|association_with_transcript=31bp_to_ENST00000332539,NM_004778,uc001nqc.2_5end | |association_with_transcript=31bp_to_ENST00000332539,NM_004778,uc001nqc.2_5end | ||
|cluster_id=chr11:60623407..60623412,- | |||
|coexpression_cluster_id=C3168 | |coexpression_cluster_id=C3168 | ||
|description=CAGE_peak_3_at_PTGDR2_5end | |description=CAGE_peak_3_at_PTGDR2_5end | ||
|id=chr11:60623407..60623412,- | |id=chr11:60623407..60623412,- | ||
|ontology_enrichment_celltype=CL:0000875!3.74e-08!3;CL:0002396!3.74e-08!3;CL:0002564!1.72e-07!3 | |ontology_enrichment_celltype=CL:0000875!3.74e-08!3;CL:0002396!3.74e-08!3;CL:0002564!1.72e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000875;2.25e-26;3!CL:0002396;2.25e-26;3!CL:0002575;3.91e-19;2!CL:0002549;3.44e-18;2!CL:0002564;1.08e-12;3!CL:0000669;4.96e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,1.03e-26,3;CL:0002396,1.03e-26,3;CL:0002575,3.75e-19,2;CL:0002549,4.11e-18,2;CL:0002564,9.95e-13,3;CL:0000669,4.86e-10,4;CL:0002393,2.71e-09,9;CL:0002397,2.71e-09,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002242!1.72e-07!3;UBERON:0003068!1.72e-07!3;UBERON:0002328!1.72e-07!3;UBERON:0004880!1.72e-07!3 | |ontology_enrichment_uberon=UBERON:0002242!1.72e-07!3;UBERON:0003068!1.72e-07!3;UBERON:0002328!1.72e-07!3;UBERON:0004880!1.72e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;3.44e-18;2!UBERON:0005358;3.44e-18;2!UBERON:0001886;3.44e-18;2!UBERON:0004086;3.44e-18;2!UBERON:0005282;3.44e-18;2!UBERON:0005281;3.44e-18;2!UBERON:0011135;2.65e-16;5!UBERON:0002216;2.65e-16;5!UBERON:0011134;2.65e-16;5!UBERON:0002209;2.65e-16;5!UBERON:0002213;2.65e-16;5!UBERON:0007844;2.65e-16;5!UBERON:0011138;2.65e-16;5!UBERON:0001130;2.65e-16;5!UBERON:0001066;2.65e-16;5!UBERON:0001468;2.65e-16;5!UBERON:0002242;1.08e-12;3!UBERON:0004905;2.13e-10;8!UBERON:0000982;2.13e-10;8!UBERON:0004770;2.13e-10;8!UBERON:0005284;8.03e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,4.11e-18,2;UBERON:0005358,4.11e-18,2;UBERON:0001886,4.11e-18,2;UBERON:0004086,4.11e-18,2;UBERON:0005282,4.11e-18,2;UBERON:0005281,4.11e-18,2;UBERON:0011135,3.03e-16,5;UBERON:0002216,3.03e-16,5;UBERON:0011134,3.03e-16,5;UBERON:0002209,3.03e-16,5;UBERON:0002213,3.03e-16,5;UBERON:0005856,3.03e-16,5;UBERON:0005866,3.03e-16,5;UBERON:0005863,3.03e-16,5;UBERON:0007844,3.03e-16,5;UBERON:0011138,3.03e-16,5;UBERON:0001130,3.03e-16,5;UBERON:0001066,3.03e-16,5;UBERON:0001468,3.03e-16,5;UBERON:0002242,9.95e-13,3;UBERON:0003068,9.95e-13,3;UBERON:0002328,9.95e-13,3;UBERON:0004880,9.95e-13,3;UBERON:0004905,2.31e-10,8;UBERON:0000982,2.31e-10,8;UBERON:0004770,2.31e-10,8;UBERON:0005284,8.61e-08,5 | |||
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| ||
|short_description=p3@PTGDR2 | |short_description=p3@PTGDR2 | ||
}} | }} |
Latest revision as of 14:11, 18 September 2015
Short description: | p3@PTGDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTGDR2_5end |
Coexpression cluster: | C3168_CD4_Pericytes_Neutrophils_Nucleus_Whole_CD14CD16_Fibroblast |
Association with transcript: | 31bp_to_ENST00000332539, NM_004778, uc001nqc.2_5end |
EntrezGene: | PTGDR2 |
HGNC: | 4502 |
UniProt: | Q9Y5Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 1.03e-26 | 3 |
CD14-low, CD16-positive monocyte | 1.03e-26 | 3 |
central nervous system pericyte | 3.75e-19 | 2 |
fibroblast of choroid plexus | 4.11e-18 | 2 |
nucleus pulposus cell of intervertebral disc | 9.95e-13 | 3 |
pericyte cell | 4.86e-10 | 4 |
intermediate monocyte | 2.71e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.71e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 4.11e-18 | 2 |
ventricle of nervous system | 4.11e-18 | 2 |
choroid plexus | 4.11e-18 | 2 |
brain ventricle | 4.11e-18 | 2 |
ventricular system of brain | 4.11e-18 | 2 |
ventricular system of central nervous system | 4.11e-18 | 2 |
intervertebral cartilage | 3.03e-16 | 5 |
symphysis | 3.03e-16 | 5 |
nonsynovial joint | 3.03e-16 | 5 |
fibrous joint | 3.03e-16 | 5 |
cartilaginous joint | 3.03e-16 | 5 |
developing mesenchymal condensation | 3.03e-16 | 5 |
pre-cartilage condensation | 3.03e-16 | 5 |
cartilaginous condensation | 3.03e-16 | 5 |
cartilage element | 3.03e-16 | 5 |
post-cranial axial skeletal system | 3.03e-16 | 5 |
vertebral column | 3.03e-16 | 5 |
intervertebral disk | 3.03e-16 | 5 |
intervertebral joint | 3.03e-16 | 5 |
nucleus pulposus | 9.95e-13 | 3 |
axial mesoderm | 9.95e-13 | 3 |
notochord | 9.95e-13 | 3 |
chordamesoderm | 9.95e-13 | 3 |
articulation | 2.31e-10 | 8 |
skeletal joint | 2.31e-10 | 8 |
articular system | 2.31e-10 | 8 |
brain vasculature | 8.61e-08 | 5 |