FFCP PHASE1:Hg19::chr15:65282080..65282091,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51324 | |EntrezGene=51324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20373 | |HGNC=20373 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000558765_5end | |association_with_transcript=-35bp_to_ENST00000558765_5end | ||
|cluster_id=chr15:65282080..65282091,- | |||
|description=CAGE_peak_6_at_SPG21_5end | |description=CAGE_peak_6_at_SPG21_5end | ||
|id=chr15:65282080..65282091,- | |id=chr15:65282080..65282091,- | ||
|ontology_enrichment_celltype=CL:0002009!1.60e-18!65;CL:0000766!8.51e-18!76;CL:0002194!1.56e-17!63;CL:0000576!1.56e-17!63;CL:0000040!1.56e-17!63;CL:0000559!1.56e-17!63;CL:0002057!4.65e-17!42;CL:0000557!9.70e-17!71;CL:0000860!1.19e-15!45;CL:0000839!3.30e-15!70;CL:0000763!9.18e-12!112;CL:0000049!9.18e-12!112 | |ontology_enrichment_celltype=CL:0002009!1.60e-18!65;CL:0000766!8.51e-18!76;CL:0002194!1.56e-17!63;CL:0000576!1.56e-17!63;CL:0000040!1.56e-17!63;CL:0000559!1.56e-17!63;CL:0002057!4.65e-17!42;CL:0000557!9.70e-17!71;CL:0000860!1.19e-15!45;CL:0000839!3.30e-15!70;CL:0000763!9.18e-12!112;CL:0000049!9.18e-12!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.01e-28;39!CL:0000234;1.01e-28;39!CL:0000860;1.34e-27;33!CL:0002057;1.34e-27;33!CL:0000576;3.48e-15;48!CL:0000766;2.37e-11;69!CL:0000235;7.12e-08;6 | |ontology_enrichment_celltype_v019=CL:0000473;1.01e-28;39!CL:0000234;1.01e-28;39!CL:0000860;1.34e-27;33!CL:0002057;1.34e-27;33!CL:0000576;3.48e-15;48!CL:0000766;2.37e-11;69!CL:0000235;7.12e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.42e-30,48;CL:0000234,1.42e-30,48;CL:0002009,2.42e-26,61;CL:0002194,3.29e-25,59;CL:0000576,3.29e-25,59;CL:0000040,3.29e-25,59;CL:0000559,3.29e-25,59;CL:0000860,1.41e-24,42;CL:0002057,1.41e-24,42;CL:0000766,1.93e-23,72;CL:0000557,2.25e-23,67;CL:0000839,7.62e-22,66;CL:0000763,3.53e-17,108;CL:0000049,3.53e-17,108;CL:0002031,4.27e-11,120;CL:0000738,5.43e-11,136;CL:0002087,8.26e-11,115;CL:0002032,7.43e-10,161;CL:0000837,7.43e-10,161;CL:0000037,3.92e-09,168;CL:0000988,5.11e-09,177;CL:0000235,9.05e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.97e-19;42 | |ontology_enrichment_development_v019=CL:0002057;3.97e-19;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.22e-14!80;UBERON:0001474!3.66e-14!86;UBERON:0004765!4.23e-13!101;UBERON:0001434!4.23e-13!101;UBERON:0002193!1.19e-11!112;UBERON:0002405!1.34e-11!115;UBERON:0002390!3.55e-11!102;UBERON:0003061!3.55e-11!102;UBERON:0002204!1.29e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!3.22e-14!80;UBERON:0001474!3.66e-14!86;UBERON:0004765!4.23e-13!101;UBERON:0001434!4.23e-13!101;UBERON:0002193!1.19e-11!112;UBERON:0002405!1.34e-11!115;UBERON:0002390!3.55e-11!102;UBERON:0003061!3.55e-11!102;UBERON:0002204!1.29e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0005904;6.27e-12;4!UBERON:0006947;5.54e-09;3!UBERON:0004054;5.54e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0005904;6.27e-12;4!UBERON:0006947;5.54e-09;3!UBERON:0004054;5.54e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.45e-20,76;UBERON:0001474,7.44e-18,82;UBERON:0004765,1.14e-15,90;UBERON:0002405,6.00e-15,93;UBERON:0002390,7.59e-14,98;UBERON:0003061,7.59e-14,98;UBERON:0001434,1.95e-13,100;UBERON:0005904,1.42e-12,4;UBERON:0002193,5.89e-12,108;UBERON:0006947,1.20e-09,3;UBERON:0004054,1.20e-09,3;UBERON:0003081,7.34e-09,203 | |||
|phase1_expression=0.363356758541113,1.49870366723688,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,0.662794751455832,0,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0.232401601740905,0.142169232487422,0,1.66198622559563,0.601633342410425,0.434021741431704,0.447830948479849,1.29557466407592,0.257575567634187,1.30858414901608,1.13362783106643,0.727752183563449,1.85943229524548,1.23350366406548,0.619412741790207,2.58923153089935,0.768482119587302,1.18241114944293,0.689491361473237,0.645484683583826,2.70852973188684,2.25890807451126,0.545812300115692,2.02251136000576,0.918251677112708,0.320929027076094,0.639337125799041,0.659702600373432,1.59570926097305,2.13112375266347,1.7412554317715,0,1.24564449799115,2.00998932205395,1.5644487552606,1.52032191293582,1.21079900526674,0.736555271975129,0.632924774881769,0.633765858935825,0,0.209658645508376,1.12328631146495,1.20141514273205,1.28580469357664,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.973269740605272,0.283604451492204,0.221729397462564,0.263504357079378,0.785874452986276,0,0,0.649094787309367,0.174129737299267,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0.775250277507987,0.71153252537342,0.33472061276467,0,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0.302714855289863,0,0.468642863667593,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0.61246251376468,0,0.723280468230358,1.18800285728205,0.247266929278557,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.226864366320042,0,0,0,0,0.206105058476878,0,0.37223371266318,0,0,0,0.368199594569197,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0.621966330092223,0.252320850875628,0,0,0,0,1.39310378409594,0.721879481669586,0,0.337169380156203,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,1.96565443335525,1.77236972004421,0,0.737930631258681,0.171567810298526,0.109750285408626,0,0.100528972411631,0.185176890317059,1.3032332212413,0,0,0.695582429850461,0.117408694235822,0,0,0.190254152234598,2.37061319387782,0.858486162094873,1.72351904261178,0.936017060556951,1.18904929830983,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0.207328115540772,0.288239906833923,0.25248486685276,0.063497894292169,0.381988425558278,0,1.71072446022705,0.616964956219941,0.300343057843917,0.857479297891735,0,0.87192013766656,0,0.775630294546667,0,0,1.59562869950922,1.04007436911366,0.257207374262142,0,0,0.57191197463259,0,0,0,0,0,0,0,0.199945982364114,1.2162378064119,2.00902836572851,0,0,1.14861935834114,0,0,0.410952645100767,0,0.224170287987055,0,0,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0,0.749007023947182,0,2.90090859405225,0.24538298343828,0,0.271265023699736,0,0.356857977594324,0.315404830067869,0.35142424497814,0.601892199455438,0,0,0,0.368738337083406,0.0868836144680828,0,0,0.206768026122887,0.862856803274467,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.232420756919918,0.362578348774867,0.200506470303285,0.368323955743585,0.459257792658427,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,2.27764876265012,2.7821073144885,0.0915694648183434,0,0,0,3.21367859688319,0.676695028044854,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.170453254832202,0.267096106940212,0,0.192190067365106,0,0.10115778085555,0,0,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0,0,0.632758849437452,0.571890581771475,0.511795582622668,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0.731140468893853,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0,0,0.699869440489966,0.288666338176536,0,0,2.7301702225266,0,0,0.443430153536676,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0.383010740264733,0.211673582723883,0,0.842391534340376,0.456469358066384,0,2.50634477090067,0,0,0,0.425846237690326,0,0,0.223676107892416,0,0.390776190804081,0,0,0,0,1.4098700508785,0.935702702041099,0.439524537815682,0.121360521749513,0.111443384277478,0,0.23874448473769,0.593929361665277,0,0,0,0.222617410045812,0.16480387422676,0,0.19924798825107,0.828851746593443,0,0.102268682502155,0,0.622079175323615,0.179736702294654,0.358042349351218,0.511572370226872,0.690503839458535,0,0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| ||
|short_description=p6@SPG21 | |short_description=p6@SPG21 | ||
}} | }} |
Latest revision as of 14:23, 18 September 2015
Short description: | p6@SPG21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SPG21_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000558765_5end |
EntrezGene: | SPG21 |
HGNC: | 20373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.42e-30 | 48 |
phagocyte | 1.42e-30 | 48 |
macrophage dendritic cell progenitor | 2.42e-26 | 61 |
monopoietic cell | 3.29e-25 | 59 |
monocyte | 3.29e-25 | 59 |
monoblast | 3.29e-25 | 59 |
promonocyte | 3.29e-25 | 59 |
classical monocyte | 1.41e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.41e-24 | 42 |
myeloid leukocyte | 1.93e-23 | 72 |
granulocyte monocyte progenitor cell | 2.25e-23 | 67 |
myeloid lineage restricted progenitor cell | 7.62e-22 | 66 |
myeloid cell | 3.53e-17 | 108 |
common myeloid progenitor | 3.53e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 4.27e-11 | 120 |
leukocyte | 5.43e-11 | 136 |
nongranular leukocyte | 8.26e-11 | 115 |
hematopoietic oligopotent progenitor cell | 7.43e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.43e-10 | 161 |
hematopoietic stem cell | 3.92e-09 | 168 |
hematopoietic cell | 5.11e-09 | 177 |
macrophage | 9.05e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.45e-20 | 76 |
bone element | 7.44e-18 | 82 |
skeletal element | 1.14e-15 | 90 |
immune system | 6.00e-15 | 93 |
hematopoietic system | 7.59e-14 | 98 |
blood island | 7.59e-14 | 98 |
skeletal system | 1.95e-13 | 100 |
duct of male reproductive system | 1.42e-12 | 4 |
hemolymphoid system | 5.89e-12 | 108 |
male genital duct | 1.20e-09 | 3 |
internal male genitalia | 1.20e-09 | 3 |
lateral plate mesoderm | 7.34e-09 | 203 |