FFCP PHASE1:Hg19::chr10:60145155..60145206,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7019 | |EntrezGene=7019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11741 | |HGNC=11741 | ||
|TSSclassifier=strong | |||
|UniProt=A8MRB2,E5KSU5,Q00059 | |UniProt=A8MRB2,E5KSU5,Q00059 | ||
|association_with_transcript=0bp_to_ENST00000373895,NM_003201,uc001jkf.2,uc001jkg.2,uc001jkh.2_5end | |association_with_transcript=0bp_to_ENST00000373895,NM_003201,uc001jkf.2,uc001jkg.2,uc001jkh.2_5end | ||
|cluster_id=chr10:60145155..60145206,+ | |||
|description=CAGE_peak_1_at_TFAM_5end | |description=CAGE_peak_1_at_TFAM_5end | ||
|id=chr10:60145155..60145206,+ | |id=chr10:60145155..60145206,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.16e-14!53;CL:0000051!1.16e-14!53;CL:0000838!3.23e-14!52;CL:0000037!8.32e-10!172;CL:0000566!8.32e-10!172;CL:0000945!3.27e-09!24;CL:0000826!3.27e-09!24;CL:0002032!1.05e-08!165;CL:0000837!1.05e-08!165;CL:0000988!1.87e-08!182 | |ontology_enrichment_celltype=CL:0000542!1.16e-14!53;CL:0000051!1.16e-14!53;CL:0000838!3.23e-14!52;CL:0000037!8.32e-10!172;CL:0000566!8.32e-10!172;CL:0000945!3.27e-09!24;CL:0000826!3.27e-09!24;CL:0002032!1.05e-08!165;CL:0000837!1.05e-08!165;CL:0000988!1.87e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.30e-09;24!CL:0000542;7.18e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.16e-14,53;CL:0000051,1.16e-14,53;CL:0000838,3.23e-14,52;CL:0000945,3.27e-09,24;CL:0000826,3.27e-09,24;CL:0000037,3.36e-09,168;CL:0002032,3.96e-08,161;CL:0000837,3.96e-08,161;CL:0000988,4.01e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;7.18e-09;53 | |||
|ontology_enrichment_disease=DOID:162!1.96e-47!235;DOID:14566!1.85e-46!239;DOID:0050687!8.26e-28!143;DOID:305!7.11e-27!106;DOID:0050686!6.82e-22!137;DOID:2531!3.42e-17!51;DOID:0060083!3.42e-17!51;DOID:1240!6.36e-14!39;DOID:8692!1.47e-11!31 | |ontology_enrichment_disease=DOID:162!1.96e-47!235;DOID:14566!1.85e-46!239;DOID:0050687!8.26e-28!143;DOID:305!7.11e-27!106;DOID:0050686!6.82e-22!137;DOID:2531!3.42e-17!51;DOID:0060083!3.42e-17!51;DOID:1240!6.36e-14!39;DOID:8692!1.47e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.57e-11;31!DOID:1240;2.78e-11;39!DOID:2531;3.01e-11;51!DOID:0060083;3.01e-11;51!DOID:305;1.03e-07;106!DOID:0050687;1.22e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.96e-47,235;DOID:14566,1.85e-46,239;DOID:0050687,8.26e-28,143;DOID:305,7.11e-27,106;DOID:0050686,6.82e-22,137;DOID:2531,3.42e-17,51;DOID:0060083,3.42e-17,51;DOID:1240,6.36e-14,39;DOID:8692,1.47e-11,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@TFAM | |short_description=p1@TFAM | ||
}} | }} |
Latest revision as of 14:37, 18 September 2015
Short description: | p1@TFAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TFAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373895, NM_003201, uc001jkf.2, uc001jkg.2, uc001jkh.2_5end |
EntrezGene: | TFAM |
HGNC: | 11741 |
UniProt: | A8MRB2E5KSU5Q00059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.16e-14 | 53 |
common lymphoid progenitor | 1.16e-14 | 53 |
lymphoid lineage restricted progenitor cell | 3.23e-14 | 52 |
lymphocyte of B lineage | 3.27e-09 | 24 |
pro-B cell | 3.27e-09 | 24 |
hematopoietic stem cell | 3.36e-09 | 168 |
hematopoietic oligopotent progenitor cell | 3.96e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.96e-08 | 161 |
hematopoietic cell | 4.01e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.96e-47 | 235 |
disease of cellular proliferation | 1.85e-46 | 239 |
cell type cancer | 8.26e-28 | 143 |
carcinoma | 7.11e-27 | 106 |
organ system cancer | 6.82e-22 | 137 |
hematologic cancer | 3.42e-17 | 51 |
immune system cancer | 3.42e-17 | 51 |
leukemia | 6.36e-14 | 39 |
myeloid leukemia | 1.47e-11 | 31 |