FFCP PHASE1:Hg19::chr11:60718699..60718724,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51296 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18068 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IY34 | |||
|association_with_transcript=392bp_to_BC037974_5end | |||
|cluster_id=chr11:60718699..60718724,- | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_13_at_SLC15A3_5end | |||
|id=chr11:60718699..60718724,- | |||
|ontology_enrichment_celltype=CL:0000738!2.40e-13!140;CL:0000766!4.90e-13!76;CL:0002194!9.57e-12!63;CL:0000576!9.57e-12!63;CL:0000040!9.57e-12!63;CL:0000559!9.57e-12!63;CL:0002009!3.38e-11!65;CL:0000839!5.93e-11!70;CL:0000557!1.04e-10!71;CL:0002087!1.31e-10!119;CL:0002032!4.12e-09!165;CL:0000837!4.12e-09!165;CL:0002031!4.75e-09!124;CL:0000037!6.01e-09!172;CL:0000566!6.01e-09!172;CL:0000763!8.29e-09!112;CL:0000049!8.29e-09!112;CL:0000990!2.23e-08!8;CL:0000988!6.36e-08!182;CL:0002057!1.46e-07!42;CL:0000860!8.00e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000840;1.09e-17;5!CL:0000235;1.95e-17;6!CL:0000228;3.26e-12;1!CL:0002372;3.26e-12;1!CL:0000990;5.42e-12;8!CL:0000945;2.01e-11;24!CL:0000451;6.56e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.03e-17,5;CL:0001029,1.03e-17,5;CL:0000235,1.90e-17,6;CL:0000228,2.75e-12,1;CL:0002372,2.75e-12,1;CL:0000990,5.23e-12,8;CL:0000945,2.38e-11,24;CL:0000826,2.38e-11,24;CL:0002087,4.32e-10,115;CL:0000738,5.17e-10,136;CL:0000451,6.37e-10,10;CL:0002031,1.31e-09,120;CL:0002032,3.39e-08,161;CL:0000837,3.39e-08,161;CL:0000037,8.77e-08,168;CL:0000988,2.67e-07,177;CL:0000766,6.33e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.63e-12!112;UBERON:0002390!3.49e-12!102;UBERON:0003061!3.49e-12!102;UBERON:0002405!5.56e-10!115;UBERON:0002371!8.06e-09!80;UBERON:0001474!8.56e-08!86;UBERON:0004177!3.77e-07!7;UBERON:0002106!7.29e-07!3;UBERON:0004854!7.29e-07!3;UBERON:0009034!7.29e-07!3;UBERON:0002095!7.29e-07!3;UBERON:0004782!7.29e-07!3;UBERON:0003281!7.29e-07!3;UBERON:0009664!7.29e-07!3;UBERON:0002296!7.29e-07!3;UBERON:0005602!7.29e-07!3;UBERON:0001179!7.29e-07!3;UBERON:0006293!7.29e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;3.26e-12;1!UBERON:0000997;3.26e-12;1!UBERON:0005056;3.26e-12;1!UBERON:0004176;3.26e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.46e-12,1;UBERON:0000997,3.45e-12,1;UBERON:0005056,3.45e-12,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44522898393444,2.79142004129816,2.2826126580967,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0.32389366601898,0,0,0,0,0.464858073811369,0,0.619412741790207,0,0,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0.736555271975129,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,4.21911611751088,4.87563264437948,3.58986493400936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0.232387885739037,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,6.78612368903789,3.26988557035202,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,1.10776324914963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,1.17590876897253,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0,0,0,0,0,0,0.414239055347196,1.48849806543585,0,1.09613338542806,3.19170628885091,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0.489473409012935,0,1.85280868296583,0.219284049578707,0.176689145945881,0,0.506827321959218,0,0,0.607719912354764,0,0.194860308839388,0.398594520940089,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.257831551894309,0.999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0.534434810531121,0,0,0,0.267964130156178,0,0,0,0,0.258355639344024,0.372448285775147,0,0,0,0,0,0.606168477131288,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p13@SLC15A3 | |||
}} |
Latest revision as of 14:37, 18 September 2015
Short description: | p13@SLC15A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SLC15A3_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | 392bp_to_BC037974_5end |
EntrezGene: | SLC15A3 |
HGNC: | 18068 |
UniProt: | Q8IY34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.03e-17 | 5 |
common dendritic progenitor | 1.03e-17 | 5 |
macrophage | 1.90e-17 | 6 |
multinucleate cell | 2.75e-12 | 1 |
myotube | 2.75e-12 | 1 |
conventional dendritic cell | 5.23e-12 | 8 |
lymphocyte of B lineage | 2.38e-11 | 24 |
pro-B cell | 2.38e-11 | 24 |
nongranular leukocyte | 4.32e-10 | 115 |
leukocyte | 5.17e-10 | 136 |
dendritic cell | 6.37e-10 | 10 |
hematopoietic lineage restricted progenitor cell | 1.31e-09 | 120 |
hematopoietic oligopotent progenitor cell | 3.39e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.39e-08 | 161 |
hematopoietic stem cell | 8.77e-08 | 168 |
hematopoietic cell | 2.67e-07 | 177 |
myeloid leukocyte | 6.33e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.46e-12 | 1 |
mammalian vulva | 3.45e-12 | 1 |
external female genitalia | 3.45e-12 | 1 |