FFCP PHASE1:Hg19::chr1:54879140..54879168,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23648 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15674 | |||
|TSSclassifier=strong | |||
|UniProt=E9PK49 | |||
|association_with_transcript=0bp_to_ENST00000525990_5end | |||
|cluster_id=chr1:54879140..54879168,- | |||
|description=CAGE_peak_3_at_SSBP3_5end | |||
|id=chr1:54879140..54879168,- | |||
|ontology_enrichment_celltype=CL:0000222!1.89e-17!119;CL:0000115!4.79e-16!35;CL:0000055!8.44e-16!180;CL:0000183!1.90e-13!59;CL:0000680!2.81e-13!57;CL:0000056!2.81e-13!57;CL:0000355!2.81e-13!57;CL:0002139!2.97e-13!24;CL:0000187!1.48e-12!54;CL:0002078!4.21e-12!44;CL:0000192!4.48e-12!42;CL:0000514!4.48e-12!42;CL:0000071!1.83e-10!18;CL:0002546!1.83e-10!18;CL:0000359!8.77e-10!32;CL:0000393!4.38e-09!60;CL:0000211!4.38e-09!60;CL:0000057!5.87e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000115;7.86e-18;36!CL:0002139;2.01e-16;24!CL:0000071;7.59e-13;18!CL:0002078;5.34e-10;45!CL:0000359;3.04e-09;32!CL:0000192;2.64e-08;43!CL:0000187;6.81e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.41e-21,36;CL:0000222,1.84e-21,121;CL:0002139,9.84e-17,24;CL:0002078,3.05e-15,45;CL:0000680,3.00e-13,58;CL:0000056,3.00e-13,58;CL:0000355,3.00e-13,58;CL:0000071,4.12e-13,18;CL:0002546,4.12e-13,18;CL:0000187,2.39e-12,55;CL:0000192,7.37e-12,43;CL:0000514,7.37e-12,43;CL:0000213,3.77e-10,58;CL:0000215,3.77e-10,58;CL:0000359,5.20e-10,32;CL:0000393,8.73e-10,61;CL:0000211,8.73e-10,61 | |||
|ontology_enrichment_development_v019=CL:0002546;7.59e-13;18!CL:0000514;2.64e-08;43!CL:0000355;3.45e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.33e-21!69;UBERON:0002049!2.34e-21!79;UBERON:0007798!2.34e-21!79;UBERON:0001981!2.42e-18!60;UBERON:0007500!2.42e-18!60;UBERON:0004537!2.42e-18!60;UBERON:0006965!2.42e-18!60;UBERON:0004535!3.85e-17!110;UBERON:0004872!1.29e-16!84;UBERON:0000914!3.91e-16!83;UBERON:0002329!3.91e-16!83;UBERON:0003077!3.91e-16!83;UBERON:0003059!3.91e-16!83;UBERON:0007282!3.91e-16!83;UBERON:0009618!3.91e-16!83;UBERON:0007285!3.91e-16!83;UBERON:0000490!5.07e-16!138;UBERON:0004290!6.16e-16!70;UBERON:0001009!1.35e-15!113;UBERON:0003914!1.16e-13!118;UBERON:0001134!6.44e-13!61;UBERON:0002036!6.44e-13!61;UBERON:0003082!6.44e-13!61;UBERON:0002385!7.29e-13!63;UBERON:0001015!7.29e-13!63;UBERON:0000383!7.29e-13!63;UBERON:0005256!9.11e-13!143;UBERON:0001637!9.75e-13!42;UBERON:0003509!9.75e-13!42;UBERON:0004572!9.75e-13!42;UBERON:0000486!7.86e-12!82;UBERON:0000119!3.75e-11!312;UBERON:0000483!1.25e-10!309;UBERON:0001986!1.83e-10!18;UBERON:0004638!1.83e-10!18;UBERON:0004852!1.83e-10!18;UBERON:0004573!2.66e-09!33;UBERON:0004571!2.66e-09!33;UBERON:0000477!7.62e-09!286;UBERON:0000487!1.83e-08!22;UBERON:0004111!9.09e-08!241;UBERON:0006914!3.12e-07!25;UBERON:0000025!5.77e-07!194;UBERON:0000947!6.73e-07!21;UBERON:0010191!6.73e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.59e-13;18!UBERON:0001986;7.59e-13;18!UBERON:0004852;7.59e-13;18!UBERON:0000055;7.97e-13;65!UBERON:0007500;9.58e-13;56!UBERON:0001981;9.58e-13;56!UBERON:0004537;9.58e-13;56!UBERON:0001637;1.43e-10;42!UBERON:0003509;1.43e-10;42!UBERON:0004572;1.43e-10;42!UBERON:0000487;4.07e-10;22!UBERON:0004573;1.32e-09;33!UBERON:0004571;1.32e-09;33!UBERON:0002049;2.69e-09;75!UBERON:0007798;2.69e-09;75!UBERON:0003914;6.89e-09;74!UBERON:0006914;4.72e-08;25!UBERON:0010260;5.34e-07;9!UBERON:0000947;6.76e-07;21!UBERON:0010191;6.76e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.81e-24,68;UBERON:0002049,1.24e-21,78;UBERON:0007798,1.24e-21,78;UBERON:0007500,2.62e-20,59;UBERON:0001981,2.62e-20,59;UBERON:0004537,2.62e-20,59;UBERON:0006965,2.62e-20,59;UBERON:0000490,8.16e-20,148;UBERON:0007503,3.67e-18,78;UBERON:0004872,4.03e-17,83;UBERON:0003077,5.21e-17,72;UBERON:0007285,5.21e-17,72;UBERON:0002329,1.20e-16,71;UBERON:0003059,1.20e-16,71;UBERON:0007282,1.20e-16,71;UBERON:0004290,1.20e-16,71;UBERON:0009618,1.20e-16,71;UBERON:0007524,1.66e-16,73;UBERON:0004535,2.84e-15,109;UBERON:0001637,7.91e-15,42;UBERON:0003509,7.91e-15,42;UBERON:0004572,7.91e-15,42;UBERON:0001009,3.09e-14,112;UBERON:0004638,4.12e-13,18;UBERON:0001986,4.12e-13,18;UBERON:0004852,4.12e-13,18;UBERON:0003914,9.34e-13,117;UBERON:0001134,9.98e-13,62;UBERON:0002036,9.98e-13,62;UBERON:0003082,9.98e-13,62;UBERON:0002385,1.96e-12,64;UBERON:0001015,1.96e-12,64;UBERON:0000383,1.96e-12,64;UBERON:0005256,3.91e-12,122;UBERON:0000486,1.42e-11,83;UBERON:0004573,1.86e-10,33;UBERON:0004571,1.86e-10,33;UBERON:0000487,2.10e-10,22;UBERON:0003104,4.98e-09,160;UBERON:0009142,4.98e-09,160;UBERON:0000926,1.32e-08,315;UBERON:0004120,1.32e-08,315;UBERON:0006603,1.32e-08,315;UBERON:0006914,2.73e-08,25;UBERON:0000947,4.84e-07,21;UBERON:0010191,4.84e-07,21;UBERON:0010260,4.97e-07,9 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,0,0.446961094427288,0,0,1.26343974685366,0,0.982935746006035,0,0,0,2.35156070624089,0.662794751455832,2.6893005858071,5.42425075221579,5.11217063271161,3.90346239032406,0.492484232307152,0.408001382488506,0,0,0.273748850145768,0,0,0,0,0.393364276848904,0,0,0,0.30120591877825,1.47901604066715,0,0,4.11040615068786,0.553995408531877,0.401088894940283,0.217010870715852,4.25439401055856,1.6194683300949,3.34848237924443,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,0.560508562981536,2.10707267820062,1.7703879310245,2.35806457649499,0.205601498999509,0.668745981562712,0,0.473447805734733,0,0.891283655081389,0.294605907474837,0.664601683750863,0,0,0.520237390239513,7.23526780256175,8.0141505157896,5.506258628966,1.03800594213442,2.40786745280742,0,1.92625882585863,0,0.34362744548263,1.26509846009751,1.59282707162048,1.95325036156926,0.950452044448374,1.05402583354441,0.511946444617674,1.24930726552346,0.947109008176067,0,0.604820229674197,0,0.724122019413995,0,4.02420515822182,1.02290049474824,0.722878304769133,2.00535164254356,1.01392563272577,4.7717156823066,1.94653948121054,0.189069634328136,0.221729397462564,0.351339142772504,2.16115474571226,0.364295288292542,0,0,0,0,0,0,0,4.96906018416763,4.30117297553062,4.16568601929113,2.82653970962005,2.93649605346934,7.97842321626196,4.59788926380983,5.42675194255591,3.20189636418039,2.67776490211736,4.02829317109147,6.84244895146661,6.58967555380058,2.94130464276695,2.43042584364528,9.91226983953285,8.08305741454211,6.53146586803269,4.5994991239765,7.59412527654503,8.61048196472914,0,0,0.436094052142534,0,2.27934920996244,0.794455084879313,0,1.41867352879343,0.560677600142307,4.2699598291882,0.74000264525148,0.622422070799533,1.88594940897563,2.12500474047496,1.81628913173918,1.15235184896,0.937285727335186,6.55536161343673,5.13424639390004,6.42629326372745,4.69737994575059,3.23745888736263,5.75848307479219,3.26646674007829,3.68502951935304,4.02970546585485,1.18800285728205,0.247266929278557,7.28129089550421,2.15585442544872,5.72342787443825,3.87867411603089,4.15596173226274,0.877955241761676,0.612975591598039,0.150238058906597,2.26864366320042,0.358779271377724,2.77624605464138,2.33125091275518,1.20036438433761,2.47326070172253,0.772921620136887,2.04728541964749,0.675105328965065,1.07180705677318,2.27190396819703,2.66944706062668,0.80823028409406,0.355009592516614,1.20902517873168,1.3564847384839,0,0.818238361772504,0,0,0,0,0.518305275076852,0,0,0,5.78916844373597,5.52539685409922,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,5.16708818237254,7.01208869017229,0.8231480226628,1.47008711385542,0,0,0.590789906681404,11.9195036841956,0,0.343135620597051,0,0,0.100528972411631,0.648119116109707,0.977424915930974,7.27954349695705,0,1.15930404975077,0.70445216541493,8.08452107462013,5.55582615091933,3.80508304469197,0,0,0.492434012174795,0,0.743155811443641,0.93733833986777,0.16798212819886,0,0.895585227028483,0.581267877027924,0,5.41929561685538,3.96217953059517,1.03664057770386,0.288239906833923,0.12624243342638,6.98476837213859,13.3695948945397,18.7547915536075,5.13217338068116,5.86116708408944,4.20480280981484,10.861404439962,5.38229204857731,0.43596006883328,4.18028229179415,2.58543431515556,7.15312891703765,4.22651376278,1.59562869950922,5.2003718455683,1.54324424557285,1.41849132023278,2.39779961114489,0.857867961948885,2.71310802695722,0,3.25736184293735,0,0,0,0,0,3.64871341923571,3.51579964002488,2.10833939483032,0.958499421966331,0,0,1.44781306667579,3.08214483825575,1.61154866915906,7.28553435957927,0.394061520403854,0.646882724578552,0.513372145118994,0.508189248444927,0,0,0,0,0,0,0,1.2269149171914,3.50119364741774,0.813795071099207,0,0.892144943985809,0.630809660135739,0,0.902838299183157,0,0,0.664225598535437,0.921845842708516,3.47534457872331,2.74121620447837,0.686286847621712,0.620304078368662,1.2942852049117,0.640365346820666,0,0,0,0.744323423456331,0,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,6.63101683351419,3.37367278094941,3.44934055257998,7.78881643775432,1.85936605535935,0.120859449591622,0,0.0920809889358963,0.803701137152247,1.27463817604702,1.18011973463482,0.451199612907412,1.84836809050595,0,0,1.37217117560738,5.68666920354483,8.50468526382578,1.51141141271498,16.9649977959318,0.541892875087706,2.00675909541941,0.254876273045038,1.66215201785745,0.671624264166535,0,0,0.769350375349168,0.328014645699706,1.30151357865721,1.13345112812495,0,0,0.574265537996172,0.650060246036521,1.6068392984416,1.7400729292582,1.54048617114644,0.921022048356777,1.65403886981437,5.58585273315023,1.59518363305651,2.64202544989913,0.623224249527161,0.330569830721956,0.192190067365106,0.255225424989168,0,3.253918845081,0.94443704049192,6.970372701606,1.54016790088044,5.85536633348724,5.21959795245044,4.633105477598,1.00187420719394,0.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| |||
|short_description=p3@SSBP3 | |||
}} |
Latest revision as of 14:48, 18 September 2015
Short description: | p3@SSBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SSBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000525990_5end |
EntrezGene: | SSBP3 |
HGNC: | 15674 |
UniProt: | E9PK49 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.41e-21 | 36 |
mesodermal cell | 1.84e-21 | 121 |
endothelial cell of vascular tree | 9.84e-17 | 24 |
meso-epithelial cell | 3.05e-15 | 45 |
muscle precursor cell | 3.00e-13 | 58 |
myoblast | 3.00e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.00e-13 | 58 |
blood vessel endothelial cell | 4.12e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.12e-13 | 18 |
muscle cell | 2.39e-12 | 55 |
smooth muscle cell | 7.37e-12 | 43 |
smooth muscle myoblast | 7.37e-12 | 43 |
lining cell | 3.77e-10 | 58 |
barrier cell | 3.77e-10 | 58 |
vascular associated smooth muscle cell | 5.20e-10 | 32 |
electrically responsive cell | 8.73e-10 | 61 |
electrically active cell | 8.73e-10 | 61 |