Personal tools

FFCP PHASE1:Hg19::chr7:43152152..43152168,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DPIdataset=robustDPI
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=23072
|EntrezGene=23072
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=22195
|HGNC=22195
|TSSclassifier=S
|TSSclassifier=strong
|UniProt=Q76N89,A4D1V5
|UniProt=Q76N89,A4D1V5
|association_with_transcript=-29bp_to_ENST00000395891,NM_015052,uc003tid.1,uc011kbi.1_5end
|association_with_transcript=-29bp_to_ENST00000395891,NM_015052,uc003tid.1,uc011kbi.1_5end
|cluster_id=chr7:43152152..43152168,+
|coexpression_cluster_id=C3
|coexpression_cluster_id=C3
|description=CAGE_peak_6_at_HECW1_5end
|description=CAGE_peak_6_at_HECW1_5end

Latest revision as of 15:16, 18 September 2015

Short description:p6@HECW1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_6_at_HECW1_5end
Coexpression cluster:C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala
Association with transcript: -29bp_to_ENST00000395891, NM_015052, uc003tid.1, uc011kbi.1_5end
EntrezGene:HECW1
HGNC: 22195
UniProt: Q76N89A4D1V5
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6
7
8




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data