FFCP PHASE1:Hg19::chr7:44113572..44113604,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27434 | |EntrezGene=27434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9185 | |HGNC=9185 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=112bp_to_ENST00000467607_5end | |association_with_transcript=112bp_to_ENST00000467607_5end | ||
|cluster_id=chr7:44113572..44113604,- | |||
|coexpression_cluster_id=C2897 | |||
|description=CAGE_peak_4_at_POLM_5end | |description=CAGE_peak_4_at_POLM_5end | ||
|id=chr7:44113572..44113604,- | |id=chr7:44113572..44113604,- | ||
|ontology_enrichment_celltype=CL:0000066!1.11e-11!254;CL:0002139!6.23e-10!24;CL:0000071!1.13e-09!18;CL:0002546!1.13e-09!18;CL:0000115!4.32e-09!35;CL:0002078!2.51e-07!44 | |ontology_enrichment_celltype=CL:0000066!1.11e-11!254;CL:0002139!6.23e-10!24;CL:0000071!1.13e-09!18;CL:0002546!1.13e-09!18;CL:0000115!4.32e-09!35;CL:0002078!2.51e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002202;9.97e-14;9!CL:0002632;9.97e-14;9!CL:0002368;1.44e-11;13!CL:0000071;2.73e-11;18!CL:0000244;1.66e-10;4!CL:0000731;1.66e-10;4!CL:0002139;1.32e-09;24!CL:0000115;1.58e-09;36!CL:0000307;4.67e-09;3!CL:0002328;7.23e-09;3!CL:1000413;7.69e-09;9!CL:0002621;9.58e-09;3!CL:0002078;1.14e-08;45!CL:0002144;5.29e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.46e-17,253;CL:0002202,1.41e-13,9;CL:0002632,1.41e-13,9;CL:0002368,1.92e-11,13;CL:0000071,3.02e-11,18;CL:0002546,3.02e-11,18;CL:0002078,4.89e-11,45;CL:0000115,5.40e-11,36;CL:0000244,1.23e-10,4;CL:0000731,1.23e-10,4;CL:0002139,1.59e-09,24;CL:0000068,5.06e-09,3;CL:0000069,5.06e-09,3;CL:0000307,5.06e-09,3;CL:0000377,5.06e-09,3;CL:0002328,7.08e-09,3;CL:1000413,7.95e-09,9;CL:0002621,9.14e-09,3;CL:0002076,1.50e-08,42;CL:0000213,1.87e-08,58;CL:0000215,1.87e-08,58;CL:0002144,6.44e-08,3;CL:0002321,1.27e-07,250;CL:0000223,4.18e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;2.73e-11;18!CL:0000377;4.67e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.13e-09!18;UBERON:0004638!1.13e-09!18;UBERON:0004852!1.13e-09!18;UBERON:0000487!5.05e-08!22;UBERON:0002049!4.64e-07!79;UBERON:0007798!4.64e-07!79 | |ontology_enrichment_uberon=UBERON:0001986!1.13e-09!18;UBERON:0004638!1.13e-09!18;UBERON:0004852!1.13e-09!18;UBERON:0000487!5.05e-08!22;UBERON:0002049!4.64e-07!79;UBERON:0007798!4.64e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0000490;7.72e-14;33!UBERON:0005911;3.37e-13;36!UBERON:0000365;7.72e-13;5!UBERON:0000486;1.05e-12;12!UBERON:0004638;2.73e-11;18!UBERON:0001986;2.73e-11;18!UBERON:0004852;2.73e-11;18!UBERON:0000487;1.07e-10;22!UBERON:0005910;1.27e-10;6!UBERON:0006914;3.99e-09;25!UBERON:0004815;7.23e-09;3!UBERON:0002031;7.23e-09;3!UBERON:0003915;7.69e-09;9!UBERON:0004700;7.69e-09;9!UBERON:0001917;7.69e-09;9!UBERON:0001949;9.58e-09;3!UBERON:0010523;5.29e-08;3!UBERON:0001915;5.29e-08;3!UBERON:0001982;5.29e-08;3!UBERON:0006554;5.97e-08;30!UBERON:0001008;5.97e-08;30!UBERON:0004807;9.38e-08;22!UBERON:0007196;9.86e-08;15!UBERON:0001558;9.86e-08;15!UBERON:0000353;2.94e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.85e-13,5;UBERON:0004638,3.02e-11,18;UBERON:0001986,3.02e-11,18;UBERON:0004852,3.02e-11,18;UBERON:0005910,1.01e-10,6;UBERON:0000487,1.39e-10,22;UBERON:0005911,7.51e-10,82;UBERON:0006914,4.98e-09,25;UBERON:0004815,7.08e-09,3;UBERON:0002031,7.08e-09,3;UBERON:0003915,7.95e-09,9;UBERON:0004700,7.95e-09,9;UBERON:0001917,7.95e-09,9;UBERON:0001949,9.14e-09,3;UBERON:0010523,6.44e-08,3;UBERON:0001915,6.44e-08,3;UBERON:0001982,6.44e-08,3;UBERON:0007196,1.20e-07,15;UBERON:0001558,1.20e-07,15;UBERON:0000483,2.09e-07,306;UBERON:0000353,2.64e-07,15;UBERON:0000119,3.17e-07,309;UBERON:0000490,4.67e-07,148;UBERON:0004807,6.11e-07,28;UBERON:0003914,8.56e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.464448369948228,10.1136334692682,12.04823675113,4.43704812200145,0,0,0.293600439334847,0,0,1.08505435357926,0,0,0,0.290796477559129,0.755751887377619,0,0.232429036905685,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0.561643155732475,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0.983548850569165,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.434473211648397,0,0,0.255725123687061,0,0,0,1.5905718941022,0.486634870302636,0,0.886917589850256,0.790513071238134,0.130979075497713,0.364295288292542,0.370784442784429,0,0.174129737299267,0.531831842075461,0.238490624305342,0.571994910780128,2.22874500797739,2.18638648103376,2.58070378531837,3.81854551768354,0.56530794192401,2.93649605346934,1.37559020970034,0.208994966536811,0.516833518338658,1.06729878806013,0,3.22263453687318,8.36299316290364,1.22031028774085,1.10298924103761,0,0.535798369704479,0.22452937262617,0.788280363383256,0,3.79706263827252,0.732806975721629,15.8136500923276,7.75560528296651,0,0,0,0,0,0,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0,0,0,0,0,1.71141546463335,0.149448680551801,0.117434498643765,0,0,1.83738754129404,0.122834317311768,0.206651562351531,0,0,4.55080680969013,2.15585442544872,0,0,4.43302584774693,0,0,0,0.226864366320042,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.201504196455281,0,37.106083807353,11.7280831854059,2.58124135850103,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0,0.217879444092406,0,0.539325232640658,0.588664395376038,0.38474715694639,1.4763109092493,1.40241773803446,0,1.47008711385542,0,0,0,0,0,1.02940686179115,0.109750285408626,0,0.301586917234893,0,0,9.35941306751621,1.44331342025273,0.34779121492523,0.352226082707465,0.721832238805369,0,0.190254152234598,0,0,0,0,0,10.3107217385455,0.839910640994298,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.25248486685276,0,0,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0,0.5867062865676,0,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.410952645100767,1.43248770591916,0.112085143993527,0.197030760201927,0,0.77005821767849,0,0,0,0,0,3.74503511973591,0,0.828831026872071,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0.355123450626254,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,3.60911646545913,0.0920809889358963,0,0,0,9.92639148396306,0.693138033939733,0,1.46139224653261,0,3.4120015221269,3.57196781080683,0,0,0,0,9.43042210266642,12.4661401339309,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,6.89118645595407,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0,0.445160178233687,0,0.576570202095319,1.27612712494584,0.10115778085555,0,0,0,1.23213432070436,0.532306030317022,0,0.37064843820784,0.572499546967965,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0.842516912477962,0,0,1.05650146756755,0.272999822815972,0,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0,0,1.06428319221179,0,0,0,0.349934720244983,9.14110070892364,9.38423185750102,23.956016669491,0,8.17960208075337,1.68471475667626,4.43430153536676,9.41865940848534,0,0,0,0,0,0.648473311192717,0,0,0,0,0,6.13150477914872,1.00988449083511,8.67930488850652,0,0,0.191505370132367,5.50351315082095,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.37428108081644,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0.311039587661807,4.22381250392436,0,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.274792780205587,0,1.02193298195737,0,1.32969345520125,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0.174118413160805,0.52418000472609,0,0,0.0730893170861856,0.0821154570532092,0.387956065953678,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0.432164393964449,3.72757606696298,0.707082103850386,0.135904206073614,0.209205692624666,0,0,0,0.136905378891993,0,0,0.262887354279314,0.558564802544508,0,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,1.19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| ||
|short_description=p4@POLM | |short_description=p4@POLM | ||
}} | }} |
Latest revision as of 16:20, 18 September 2015
Short description: | p4@POLM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_POLM_5end |
Coexpression cluster: | C2897_Gingival_Eosinophils_Tracheal_squamous_papillary_signet_Endothelial |
Association with transcript: | 112bp_to_ENST00000467607_5end |
EntrezGene: | POLM |
HGNC: | 9185 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.46e-17 | 253 |
epithelial cell of tracheobronchial tree | 1.41e-13 | 9 |
epithelial cell of lower respiratory tract | 1.41e-13 | 9 |
respiratory epithelial cell | 1.92e-11 | 13 |
blood vessel endothelial cell | 3.02e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.02e-11 | 18 |
meso-epithelial cell | 4.89e-11 | 45 |
endothelial cell | 5.40e-11 | 36 |
transitional epithelial cell | 1.23e-10 | 4 |
urothelial cell | 1.23e-10 | 4 |
endothelial cell of vascular tree | 1.59e-09 | 24 |
duct epithelial cell | 5.06e-09 | 3 |
branched duct epithelial cell | 5.06e-09 | 3 |
tracheal epithelial cell | 5.06e-09 | 3 |
tracheoblast | 5.06e-09 | 3 |
bronchial epithelial cell | 7.08e-09 | 3 |
endothelial cell of artery | 7.95e-09 | 9 |
gingival epithelial cell | 9.14e-09 | 3 |
endo-epithelial cell | 1.50e-08 | 42 |
lining cell | 1.87e-08 | 58 |
barrier cell | 1.87e-08 | 58 |
capillary endothelial cell | 6.44e-08 | 3 |
embryonic cell | 1.27e-07 | 250 |
endodermal cell | 4.18e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
urothelium | 5.85e-13 | 5 |
blood vessel endothelium | 3.02e-11 | 18 |
endothelium | 3.02e-11 | 18 |
cardiovascular system endothelium | 3.02e-11 | 18 |
transitional epithelium | 1.01e-10 | 6 |
simple squamous epithelium | 1.39e-10 | 22 |
endo-epithelium | 7.51e-10 | 82 |
squamous epithelium | 4.98e-09 | 25 |
lower respiratory tract epithelium | 7.08e-09 | 3 |
epithelium of bronchus | 7.08e-09 | 3 |
endothelial tube | 7.95e-09 | 9 |
arterial system endothelium | 7.95e-09 | 9 |
endothelium of artery | 7.95e-09 | 9 |
gingival epithelium | 9.14e-09 | 3 |
microcirculatory vessel | 6.44e-08 | 3 |
endothelium of capillary | 6.44e-08 | 3 |
capillary | 6.44e-08 | 3 |
tracheobronchial tree | 1.20e-07 | 15 |
lower respiratory tract | 1.20e-07 | 15 |
epithelium | 2.09e-07 | 306 |
parenchyma | 2.64e-07 | 15 |
cell layer | 3.17e-07 | 309 |
unilaminar epithelium | 4.67e-07 | 148 |
respiratory system epithelium | 6.11e-07 | 28 |
epithelial tube | 8.56e-07 | 117 |