FFCP PHASE1:Hg19::chr19:45974438..45974449,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2354 | |EntrezGene=2354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3797 | |HGNC=3797 | ||
|TSSclassifier=strong | |||
|UniProt=A1L186 | |UniProt=A1L186 | ||
|association_with_transcript=-73bp_to_BC127825_5end | |association_with_transcript=-73bp_to_BC127825_5end | ||
|cluster_id=chr19:45974438..45974449,+ | |||
|coexpression_cluster_id=C269 | |||
|description=CAGE_peak_26_at_FOSB_5end | |description=CAGE_peak_26_at_FOSB_5end | ||
|id=chr19:45974438..45974449,+ | |id=chr19:45974438..45974449,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.87e-45!42;CL:0000860!7.09e-42!45;CL:0000557!5.14e-32!71;CL:0000766!1.80e-31!76;CL:0000839!3.50e-30!70;CL:0002009!2.76e-28!65;CL:0002031!3.86e-27!124;CL:0002194!4.90e-27!63;CL:0000576!4.90e-27!63;CL:0000040!4.90e-27!63;CL:0000559!4.90e-27!63;CL:0000738!8.15e-26!140;CL:0002087!5.80e-22!119;CL:0002032!3.43e-20!165;CL:0000837!3.43e-20!165;CL:0000763!5.14e-20!112;CL:0000049!5.14e-20!112;CL:0000037!6.48e-19!172;CL:0000566!6.48e-19!172;CL:0000988!2.90e-17!182;CL:0002320!2.33e-12!365;CL:0000134!1.84e-11!358;CL:0000219!2.67e-09!390;CL:0000623!1.45e-08!3;CL:0000825!1.45e-08!3;CL:0000048!2.56e-07!430;CL:0000723!4.86e-07!436 | |ontology_enrichment_celltype=CL:0002057!1.87e-45!42;CL:0000860!7.09e-42!45;CL:0000557!5.14e-32!71;CL:0000766!1.80e-31!76;CL:0000839!3.50e-30!70;CL:0002009!2.76e-28!65;CL:0002031!3.86e-27!124;CL:0002194!4.90e-27!63;CL:0000576!4.90e-27!63;CL:0000040!4.90e-27!63;CL:0000559!4.90e-27!63;CL:0000738!8.15e-26!140;CL:0002087!5.80e-22!119;CL:0002032!3.43e-20!165;CL:0000837!3.43e-20!165;CL:0000763!5.14e-20!112;CL:0000049!5.14e-20!112;CL:0000037!6.48e-19!172;CL:0000566!6.48e-19!172;CL:0000988!2.90e-17!182;CL:0002320!2.33e-12!365;CL:0000134!1.84e-11!358;CL:0000219!2.67e-09!390;CL:0000623!1.45e-08!3;CL:0000825!1.45e-08!3;CL:0000048!2.56e-07!430;CL:0000723!4.86e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.36e-21;3!CL:0000860;2.36e-15;33!CL:0002057;2.36e-15;33!CL:0000473;1.95e-13;39!CL:0000234;1.95e-13;39!CL:0000097;2.30e-13;5!CL:0001014;3.86e-09;2!CL:0001016;3.86e-09;2!CL:0000766;9.47e-09;69!CL:0000163;7.90e-08;9!CL:0000576;2.75e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.29e-21,3;CL:0000557,1.94e-17,67;CL:0000839,5.65e-14,66;CL:0000097,2.23e-13,5;CL:0002028,2.23e-13,5;CL:0000860,7.79e-13,42;CL:0002057,7.79e-13,42;CL:0000766,8.95e-13,72;CL:0002031,1.06e-11,120;CL:0002009,1.27e-11,61;CL:0000473,3.34e-11,48;CL:0000234,3.34e-11,48;CL:0000763,1.40e-10,108;CL:0000049,1.40e-10,108;CL:0000738,3.20e-10,136;CL:0001014,4.34e-09,2;CL:0001016,4.34e-09,2;CL:0002194,6.52e-09,59;CL:0000576,6.52e-09,59;CL:0000040,6.52e-09,59;CL:0000559,6.52e-09,59;CL:0002032,1.74e-08,161;CL:0000837,1.74e-08,161;CL:0000037,4.31e-08,168;CL:0000163,7.77e-08,9;CL:0000988,1.25e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.93e-27!80;UBERON:0001474!9.82e-27!86;UBERON:0004765!1.44e-24!101;UBERON:0001434!1.44e-24!101;UBERON:0002390!1.16e-19!102;UBERON:0003061!1.16e-19!102;UBERON:0002193!3.78e-17!112;UBERON:0002405!1.76e-16!115;UBERON:0002384!1.18e-11!375;UBERON:0002204!2.90e-11!167;UBERON:0003081!1.66e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.36e-21;3!UBERON:0000920;1.36e-21;3!UBERON:0005631;3.94e-07;10!UBERON:0000158;3.94e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.29e-21,3;UBERON:0002371,2.59e-15,76;UBERON:0001474,3.76e-14,82;UBERON:0004765,7.75e-13,90;UBERON:0002405,2.11e-12,93;UBERON:0002390,9.82e-12,98;UBERON:0003061,9.82e-12,98;UBERON:0001434,1.74e-11,100;UBERON:0002193,1.40e-10,108;UBERON:0003124,7.99e-10,7 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,1.6446715520873,1.23882548358041,0.575384784644301,0.512321413058201,0.709446689665756,0.689491361473237,1.93645405075148,2.70852973188684,0.564727018627814,0.272906150057846,0.449446968890169,0.918251677112708,0.962787081228281,3.19668562899521,0,0.598390972864896,0.426224750532694,0.580418477257168,0,0.622822248995575,1.00499466102697,0.521482918420201,0.868755378820466,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681968437569,0,0,0,0,0.786021525498329,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93923419527467,0.864719720501769,2.01987893482208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.614321404198464,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,3.82801391678303,0,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,1.19472429772959,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p26@FOSB | |short_description=p26@FOSB | ||
}} | }} |
Latest revision as of 17:48, 18 September 2015
Short description: | p26@FOSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_FOSB_5end |
Coexpression cluster: | C269_Basophils_Mast_Eosinophils_mature_CD14_chorionic_CD4 |
Association with transcript: | -73bp_to_BC127825_5end |
EntrezGene: | FOSB |
HGNC: | 3797 |
UniProt: | A1L186 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.29e-21 | 3 |
granulocyte monocyte progenitor cell | 1.94e-17 | 67 |
myeloid lineage restricted progenitor cell | 5.65e-14 | 66 |
mast cell | 2.23e-13 | 5 |
basophil mast progenitor cell | 2.23e-13 | 5 |
classical monocyte | 7.79e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.79e-13 | 42 |
myeloid leukocyte | 8.95e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 1.06e-11 | 120 |
macrophage dendritic cell progenitor | 1.27e-11 | 61 |
defensive cell | 3.34e-11 | 48 |
phagocyte | 3.34e-11 | 48 |
myeloid cell | 1.40e-10 | 108 |
common myeloid progenitor | 1.40e-10 | 108 |
leukocyte | 3.20e-10 | 136 |
CD1a-positive Langerhans cell | 4.34e-09 | 2 |
immature CD1a-positive Langerhans cell | 4.34e-09 | 2 |
monopoietic cell | 6.52e-09 | 59 |
monocyte | 6.52e-09 | 59 |
monoblast | 6.52e-09 | 59 |
promonocyte | 6.52e-09 | 59 |
hematopoietic oligopotent progenitor cell | 1.74e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-08 | 161 |
hematopoietic stem cell | 4.31e-08 | 168 |
endocrine cell | 7.77e-08 | 9 |
hematopoietic cell | 1.25e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.29e-21 | 3 |
bone marrow | 2.59e-15 | 76 |
bone element | 3.76e-14 | 82 |
skeletal element | 7.75e-13 | 90 |
immune system | 2.11e-12 | 93 |
hematopoietic system | 9.82e-12 | 98 |
blood island | 9.82e-12 | 98 |
skeletal system | 1.74e-11 | 100 |
hemolymphoid system | 1.40e-10 | 108 |
chorion | 7.99e-10 | 7 |