FFCP PHASE1:Hg19::chr14:105635057..105635084,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3714 | |EntrezGene=3714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6189 | |HGNC=6189 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y219 | |UniProt=Q9Y219 | ||
|association_with_transcript=76bp_to_ENST00000331782,ENST00000347004,NM_002226,NM_145159,uc001yqg.2,uc001yqh.2_5end | |association_with_transcript=76bp_to_ENST00000331782,ENST00000347004,NM_002226,NM_145159,uc001yqg.2,uc001yqh.2_5end | ||
|cluster_id=chr14:105635057..105635084,- | |||
|description=CAGE_peak_2_at_JAG2_5end | |description=CAGE_peak_2_at_JAG2_5end | ||
|id=chr14:105635057..105635084,- | |id=chr14:105635057..105635084,- | ||
|ontology_enrichment_celltype=CL:0000066!1.90e-37!254;CL:0000076!6.62e-19!62;CL:0002076!3.20e-17!43;CL:0002139!2.48e-14!24;CL:0000223!4.77e-14!59;CL:0000115!9.73e-13!35;CL:0000071!3.04e-11!18;CL:0002546!3.04e-11!18;CL:0002078!7.83e-11!44;CL:0000213!1.30e-10!57;CL:0000215!1.30e-10!57;CL:0002251!3.66e-09!21;CL:0002368!9.63e-09!13;CL:0002159!5.47e-07!13;CL:0002321!8.71e-07!248 | |ontology_enrichment_celltype=CL:0000066!1.90e-37!254;CL:0000076!6.62e-19!62;CL:0002076!3.20e-17!43;CL:0002139!2.48e-14!24;CL:0000223!4.77e-14!59;CL:0000115!9.73e-13!35;CL:0000071!3.04e-11!18;CL:0002546!3.04e-11!18;CL:0002078!7.83e-11!44;CL:0000213!1.30e-10!57;CL:0000215!1.30e-10!57;CL:0002251!3.66e-09!21;CL:0002368!9.63e-09!13;CL:0002159!5.47e-07!13;CL:0002321!8.71e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.30e-17;24!CL:0002076;1.12e-14;42!CL:0000115;4.56e-14;36!CL:0000071;3.53e-13;18!CL:0002251;4.61e-12;20!CL:0000076;2.51e-10;63!CL:0002368;4.14e-10;13!CL:0002078;1.29e-09;45!CL:0000213;8.83e-08;58!CL:0000215;8.83e-08;58!CL:0002159;2.50e-07;14!CL:1000413;3.58e-07;9!CL:0002202;5.39e-07;9!CL:0002632;5.39e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.70e-31,253;CL:0002076,1.22e-19,42;CL:0000076,6.36e-19,63;CL:0002139,7.10e-17,24;CL:0000115,9.56e-17,36;CL:0000223,7.37e-16,58;CL:0002078,4.86e-14,45;CL:0000071,3.60e-13,18;CL:0002546,3.60e-13,18;CL:0002251,4.29e-12,20;CL:0000213,5.63e-12,58;CL:0000215,5.63e-12,58;CL:0002368,3.57e-10,13;CL:0002321,4.46e-08,250;CL:0002159,2.22e-07,14;CL:1000413,4.27e-07,9;CL:0002202,4.68e-07,9;CL:0002632,4.68e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;3.53e-13;18!CL:0000223;2.80e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.10e-13!106;DOID:0050687!2.29e-11!143;DOID:1749!1.54e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.26e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.23e-09,106;DOID:1749,1.13e-07,14;DOID:0050687,1.70e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.78e-14!115;UBERON:0004111!3.39e-13!241;UBERON:0001986!3.04e-11!18;UBERON:0004638!3.04e-11!18;UBERON:0004852!3.04e-11!18;UBERON:0000487!4.84e-11!22;UBERON:0000483!5.88e-11!309;UBERON:0000119!1.53e-10!312;UBERON:0006914!5.45e-10!25;UBERON:0000477!7.74e-10!286;UBERON:0004121!1.08e-09!169;UBERON:0000924!1.56e-09!173;UBERON:0006601!1.56e-09!173;UBERON:0004119!1.86e-09!169;UBERON:0000925!1.86e-09!169;UBERON:0006595!1.86e-09!169;UBERON:0001004!1.98e-09!72;UBERON:0000064!2.03e-09!219;UBERON:0000025!7.60e-08!194;UBERON:0005743!8.05e-08!86;UBERON:0000153!1.24e-07!129;UBERON:0007811!1.24e-07!129;UBERON:0000033!1.63e-07!123;UBERON:0004921!2.15e-07!129;UBERON:0004185!2.15e-07!129;UBERON:0001049!2.56e-07!57;UBERON:0005068!2.56e-07!57;UBERON:0006241!2.56e-07!57;UBERON:0007135!2.56e-07!57;UBERON:0001017!2.69e-07!82;UBERON:0000073!3.12e-07!94;UBERON:0001016!3.12e-07!94;UBERON:0000922!3.30e-07!612;UBERON:0001007!4.64e-07!155;UBERON:0001555!4.64e-07!155;UBERON:0007026!4.64e-07!155;UBERON:0003080!5.90e-07!42;UBERON:0000467!6.67e-07!625;UBERON:0000480!6.74e-07!626;UBERON:0000468!8.19e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.53e-13;18!UBERON:0001986;3.53e-13;18!UBERON:0004852;3.53e-13;18!UBERON:0000487;3.89e-13;22!UBERON:0006914;1.15e-11;25!UBERON:0000490;2.16e-11;33!UBERON:0003915;3.58e-07;9!UBERON:0004700;3.58e-07;9!UBERON:0001917;3.58e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,3.58e-13,22;UBERON:0004638,3.60e-13,18;UBERON:0001986,3.60e-13,18;UBERON:0004852,3.60e-13,18;UBERON:0004111,1.29e-12,240;UBERON:0006914,1.07e-11,25;UBERON:0007023,3.54e-11,114;UBERON:0000483,2.27e-10,306;UBERON:0000119,6.73e-10,309;UBERON:0004121,6.90e-09,171;UBERON:0000924,6.90e-09,171;UBERON:0006601,6.90e-09,171;UBERON:0011216,8.20e-09,223;UBERON:0010371,8.41e-09,104;UBERON:0001004,1.25e-07,74;UBERON:0000025,3.61e-07,192;UBERON:0003915,4.27e-07,9;UBERON:0004700,4.27e-07,9;UBERON:0001917,4.27e-07,9;UBERON:0000073,4.38e-07,53;UBERON:0002616,4.38e-07,53;UBERON:0004119,4.93e-07,160;UBERON:0000925,4.93e-07,160;UBERON:0006595,4.93e-07,160;UBERON:0000955,6.09e-07,68;UBERON:0006238,6.09e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,4.17747692052565,14.653824527421,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,13.7913183671839,16.867531451582,10.3531122846701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0.493313713811028,2.48715016007264,1.44901542867526,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,2.16115474571226,29.1436230634034,17.7976532536526,0,0,0,0.953962497221368,0.571994910780128,0.74291500265913,6.16163462836786,5.16140757063675,10.0670745466202,9.04492707078415,5.03399323451887,9.90424950984243,5.01587919688345,9.56142008926517,6.75955899104749,11.3805008339988,14.5018554159293,8.36299316290364,17.0843440283719,5.51494620518803,22.6839745406893,3.75058858793135,4.93964619777574,7.0945232704493,18.397996495906,20.8838445104988,12.8241220751285,0,0,31.3987717542625,0,0.25326102332916,0.132409180813219,0,0,0,2.1349799145941,0,0.311211035399766,0.67355336034844,0.653847612453835,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,7.53717327336858,5.72766853240753,8.89094245705912,1.70763188581434,1.59035721985782,1.51052125730374,1.45125477021519,1.00928340350251,1.09493207722749,0,0,0,0,0,1.18306800039844,0.505754070234305,0.241011029883482,1.43382164552112,1.30727666455444,0.237270619111097,0.539325232640658,0.98110732562673,1.15424147083917,11.0723318193697,7.01208869017229,0,0,0,0,0.590789906681404,0,2.7057456479485,0.171567810298526,12.7310331074006,6.74410519545717,10.0528972411631,12.2216747609259,0,0,0,0.463721619900307,0,7.79578817909799,5.09284063834272,5.51737041480335,0.790204397959275,4.29243081047436,0,0,0,4.68669169933885,6.2153387433578,3.68615252830205,4.03013352162817,6.97521452433509,13.0350110916172,0,1.32072651019839,0.207328115540772,0,0.25248486685276,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0,0,3.57656445851882,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0.904318131178758,1.74306691720059,0.899756920638513,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.256686072559497,0.254094624222463,3.90419561572865,0,1.67516265334349,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,2.74514739048685,0,0.215714200818617,0.213455115606889,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,3.14234568938218,18.2460887975989,2.94659164594868,0.114814448164607,0,0,0,0.924184045252977,3.13739907670742,0,0.527758144464379,28.4333460177242,12.7570278957387,3.67057057373637,18.5072703228347,0.270946437543853,1.50506932156456,0.254876273045038,2.49322802678617,1.11937377361089,0,0,1.79515087581472,1.31205858279882,1.30151357865721,1.64865618636356,34.5216882365155,31.6011384695852,5.74265537996172,7.80072295243825,0,2.12675580242668,0,0.15350367472613,1.7918754422989,0,0,0.767039646744908,2.49289699810865,14.7103574671271,15.1830153218434,33.8173688110648,11.3296714558216,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,9.52598915982569,12.73574323518,16.3336477291984,1.31801321087491,18.0812256521917,15.1624328100863,20.8412172162238,6.20253180558791,0,0,0,0.238231775457789,0,0,0,0,1.70918513803957,0,11.2718499351275,0,0,0,0.637705090915289,2.19537308576098,0,0.635020748171649,0.324621940274555,0,0,0,0,1.86220955581764,0.1605880751037,0,0,0.343505344755765,3.07240764308458,2.01308497103174,2.66958626739054,0,0,0,0,0,0,4.49137296979728,2.93016358543788,1.21360521749513,0,1.70481688083848,1.19372242368845,0.890894042497916,0.614321404198464,0.994147647766298,1.68803299692615,0,0,2.74463030566391,2.39097585901284,0.828851746593443,3.02319297425131,0,0,0,1.52776196950456,4.11748701753901,0.511572370226872,0.789147245095469,0,0,4.84666373047609,2.22643435588443,5.98841394003583,2.3438498497671,9.44567999958914,3.62499787717397,20.8242010362464,8.39037045966129,0.472775363535873,17.9266554085562,0.583209226766509,3.29887490373255,2.65722415744152,2.29133233388275,3.05163472634166,1.99042667876204,5.02430952221031,2.63262476584767,2.06983080686081,22.4472228288551,1.92375646259493,0,10.1448117930746,5.11618573135701,0.325942115766024,0,1.37396390102793,2.13213910407454,0,12.0874797424169,0.166211681900156,2.93274358802335,2.15668787749514,1.1747511088309,3.98482838720789,0,0.421996129056054,0,2.82706142867882,4.9769387140681,0.995261931078505,0.619202951523374,0.611030144933625,0,0,0.208843899010911,1.7524294574976,4.81546588379273,0.702793337176017,0.182454789215666,3.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| ||
|short_description=p2@JAG2 | |short_description=p2@JAG2 | ||
}} | }} |
Latest revision as of 18:29, 18 September 2015
Short description: | p2@JAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_ENST00000331782, ENST00000347004, NM_002226, NM_145159, uc001yqg.2, uc001yqh.2_5end |
EntrezGene: | JAG2 |
HGNC: | 6189 |
UniProt: | Q9Y219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.70e-31 | 253 |
endo-epithelial cell | 1.22e-19 | 42 |
squamous epithelial cell | 6.36e-19 | 63 |
endothelial cell of vascular tree | 7.10e-17 | 24 |
endothelial cell | 9.56e-17 | 36 |
endodermal cell | 7.37e-16 | 58 |
meso-epithelial cell | 4.86e-14 | 45 |
blood vessel endothelial cell | 3.60e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.60e-13 | 18 |
epithelial cell of alimentary canal | 4.29e-12 | 20 |
lining cell | 5.63e-12 | 58 |
barrier cell | 5.63e-12 | 58 |
respiratory epithelial cell | 3.57e-10 | 13 |
embryonic cell | 4.46e-08 | 250 |
general ecto-epithelial cell | 2.22e-07 | 14 |
endothelial cell of artery | 4.27e-07 | 9 |
epithelial cell of tracheobronchial tree | 4.68e-07 | 9 |
epithelial cell of lower respiratory tract | 4.68e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 3.58e-13 | 22 |
blood vessel endothelium | 3.60e-13 | 18 |
endothelium | 3.60e-13 | 18 |
cardiovascular system endothelium | 3.60e-13 | 18 |
anatomical conduit | 1.29e-12 | 240 |
squamous epithelium | 1.07e-11 | 25 |
adult organism | 3.54e-11 | 114 |
epithelium | 2.27e-10 | 306 |
cell layer | 6.73e-10 | 309 |
ectoderm-derived structure | 6.90e-09 | 171 |
ectoderm | 6.90e-09 | 171 |
presumptive ectoderm | 6.90e-09 | 171 |
organ system subdivision | 8.20e-09 | 223 |
ecto-epithelium | 8.41e-09 | 104 |
respiratory system | 1.25e-07 | 74 |
tube | 3.61e-07 | 192 |
endothelial tube | 4.27e-07 | 9 |
arterial system endothelium | 4.27e-07 | 9 |
endothelium of artery | 4.27e-07 | 9 |
regional part of nervous system | 4.38e-07 | 53 |
regional part of brain | 4.38e-07 | 53 |
endoderm-derived structure | 4.93e-07 | 160 |
endoderm | 4.93e-07 | 160 |
presumptive endoderm | 4.93e-07 | 160 |
brain | 6.09e-07 | 68 |
future brain | 6.09e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.23e-09 | 106 |
squamous cell carcinoma | 1.13e-07 | 14 |
cell type cancer | 1.70e-07 | 143 |