FFCP PHASE1:Hg19::chr8:63951661..63951683,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8836 | |EntrezGene=8836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4248 | |HGNC=4248 | ||
|TSSclassifier=strong | |||
|UniProt=Q92820 | |UniProt=Q92820 | ||
|association_with_transcript=46bp_to_ENST00000260118_5end | |association_with_transcript=46bp_to_ENST00000260118_5end | ||
|cluster_id=chr8:63951661..63951683,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_4_at_GGH_5end | |description=CAGE_peak_4_at_GGH_5end | ||
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|ontology_enrichment_celltype=CL:0000860!1.64e-11!45;CL:0002057!2.44e-11!42;CL:0000181!3.52e-09!12;CL:0000417!3.52e-09!12;CL:0000668!3.52e-09!12;CL:0000414!3.52e-09!12;CL:0000412!3.52e-09!12;CL:0000182!3.52e-09!12;CL:0000766!5.73e-09!76;CL:0002194!6.25e-09!63;CL:0000576!6.25e-09!63;CL:0000040!6.25e-09!63;CL:0000559!6.25e-09!63;CL:0002009!2.28e-08!65;CL:0000839!3.41e-08!70;CL:0000557!6.05e-08!71 | |ontology_enrichment_celltype=CL:0000860!1.64e-11!45;CL:0002057!2.44e-11!42;CL:0000181!3.52e-09!12;CL:0000417!3.52e-09!12;CL:0000668!3.52e-09!12;CL:0000414!3.52e-09!12;CL:0000412!3.52e-09!12;CL:0000182!3.52e-09!12;CL:0000766!5.73e-09!76;CL:0002194!6.25e-09!63;CL:0000576!6.25e-09!63;CL:0000040!6.25e-09!63;CL:0000559!6.25e-09!63;CL:0002009!2.28e-08!65;CL:0000839!3.41e-08!70;CL:0000557!6.05e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.14e-58;12!CL:0002262;8.76e-07;2!CL:1000398;8.76e-07;2!CL:0002535;8.76e-07;2 | |ontology_enrichment_celltype_v019=CL:0000182;5.14e-58;12!CL:0002262;8.76e-07;2!CL:1000398;8.76e-07;2!CL:0002535;8.76e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.45e-58,12;CL:0000223,2.21e-11,58;CL:0002535,6.80e-07,2;CL:0002262,9.54e-07,2;CL:1000398,9.54e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.94e-25;11!UBERON:0009497;2.85e-21;13!UBERON:0003104;4.54e-17;31!UBERON:0001041;5.33e-13;30!CL:0000223;4.70e-07;58 | |ontology_enrichment_development_v019=UBERON:0004161;3.94e-25;11!UBERON:0009497;2.85e-21;13!UBERON:0003104;4.54e-17;31!UBERON:0001041;5.33e-13;30!CL:0000223;4.70e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.71e-08!115;UBERON:0005743!5.78e-07!86;UBERON:0001049!7.47e-07!57;UBERON:0005068!7.47e-07!57;UBERON:0006241!7.47e-07!57;UBERON:0007135!7.47e-07!57 | |ontology_enrichment_uberon=UBERON:0002405!3.71e-08!115;UBERON:0005743!5.78e-07!86;UBERON:0001049!7.47e-07!57;UBERON:0005068!7.47e-07!57;UBERON:0006241!7.47e-07!57;UBERON:0007135!7.47e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.76e-46;19!UBERON:0006925;3.76e-46;19!UBERON:0002423;7.49e-35;25!UBERON:0002365;4.37e-27;31!UBERON:0002330;4.37e-27;31!UBERON:0002368;9.93e-24;33!UBERON:0000949;2.62e-17;43!UBERON:0005172;1.09e-15;52!UBERON:0005173;1.09e-15;52!UBERON:0002417;9.44e-13;58!UBERON:0000916;9.44e-13;58!UBERON:0002530;1.09e-07;57!UBERON:0001281;8.76e-07;2!UBERON:0003497;8.76e-07;2!UBERON:0003909;8.76e-07;2!UBERON:0003835;8.76e-07;2!UBERON:0006955;8.76e-07;2!UBERON:0004801;8.76e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002107;3.76e-46;19!UBERON:0006925;3.76e-46;19!UBERON:0002423;7.49e-35;25!UBERON:0002365;4.37e-27;31!UBERON:0002330;4.37e-27;31!UBERON:0002368;9.93e-24;33!UBERON:0000949;2.62e-17;43!UBERON:0005172;1.09e-15;52!UBERON:0005173;1.09e-15;52!UBERON:0002417;9.44e-13;58!UBERON:0000916;9.44e-13;58!UBERON:0002530;1.09e-07;57!UBERON:0001281;8.76e-07;2!UBERON:0003497;8.76e-07;2!UBERON:0003909;8.76e-07;2!UBERON:0003835;8.76e-07;2!UBERON:0006955;8.76e-07;2!UBERON:0004801;8.76e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.40e-46,19;UBERON:0006925,3.40e-46,19;UBERON:0008836,3.40e-46,19;UBERON:0008835,9.03e-40,22;UBERON:0003894,9.03e-40,22;UBERON:0009854,5.31e-38,23;UBERON:0007499,6.93e-35,25;UBERON:0009497,6.93e-35,25;UBERON:0000015,6.93e-35,25;UBERON:0002423,6.93e-35,25;UBERON:0006235,6.93e-35,25;UBERON:0004161,6.93e-35,25;UBERON:0009856,1.66e-33,26;UBERON:0002365,6.05e-28,31;UBERON:0002330,6.05e-28,31;UBERON:0002368,1.23e-24,35;UBERON:0005172,1.79e-23,54;UBERON:0005173,1.79e-23,54;UBERON:0002417,5.56e-21,60;UBERON:0000916,5.56e-21,60;UBERON:0000949,6.24e-19,45;UBERON:0003929,1.35e-15,54;UBERON:0005177,3.03e-14,101;UBERON:0002530,3.50e-14,59;UBERON:0009569,1.12e-12,112;UBERON:0005911,2.81e-12,82;UBERON:0001041,1.70e-11,87;UBERON:0004921,4.88e-08,118;UBERON:0003104,6.65e-07,160;UBERON:0009142,6.65e-07,160;UBERON:0006955,6.80e-07,2;UBERON:0004801,6.80e-07,2;UBERON:0001281,9.54e-07,2;UBERON:0003497,9.54e-07,2;UBERON:0003909,9.54e-07,2;UBERON:0003835,9.54e-07,2 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0.164201178899891,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.802177789880567,0.651032612147555,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0,0.411167888021826,0.309706370895104,0.575384784644301,0,0.236482229888585,0.689491361473237,0,1.35426486594342,0.564727018627814,0.272906150057846,0.898893937780338,0.306083892370903,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,1.70215567407342,0,0,0.521482918420201,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.916853528483988,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0,0,0,1.40241773803446,0,0,7.60530208930985,1.96565443335525,4.13552934676983,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0.234004265139238,0,0,0,0.283550194484773,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.215627574859517,0.128343036279748,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,1.23649213977267,0,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0.16480387422676,0,0,0,1.76352923497993,0.20453736500431,0.123084805461069,0,0,0.358042349351218,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0.139423744278603,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0.337005664903385,0.802577647298789,0.468528891450678,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0.19871461170299,0,0,0,0,0,0,0.572682980829578,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,0,0.399358000997982,0.429226048136571,0,0.0671834724867263,0,2.32991899054908,1.41809728153003,1.40106959247983,1.48287796479207,0.0984274815147488,0.0846733320657845,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0,0.121499113316049,0,4.3343139014559,1.73100140845494,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,4.25001477666439,0,0.517131825446202,0.26446520348538,0,0,0.213574825135389,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0.785270481251171,0,0.122026264901963,0,0,0.665574309221114,0.18628920882415,0.138348634936231,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,1.04397716786085,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.271878931907327,0.0657727735628491,0.236387681767936,0,0.156986185701028,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,2.823652050974,0,0,0.154348316215889,0.437119121007915,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0.143339583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| ||
|short_description=p4@GGH | |short_description=p4@GGH | ||
}} | }} |
Latest revision as of 18:30, 18 September 2015
Short description: | p4@GGH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GGH_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 46bp_to_ENST00000260118_5end |
EntrezGene: | GGH |
HGNC: | 4248 |
UniProt: | Q92820 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.45e-58 | 12 |
endodermal cell | 2.21e-11 | 58 |
epithelial cell of cervix | 6.80e-07 | 2 |
endothelial cell of sinusoid | 9.54e-07 | 2 |
endothelial cell of hepatic sinusoid | 9.54e-07 | 2 |