FFCP PHASE1:Hg19::chr12:50643695..50643708,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51474 | |EntrezGene=51474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24636 | |HGNC=24636 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVQ7 | |UniProt=F8VVQ7 | ||
|association_with_transcript=-19bp_to_ENST00000550592_5end | |association_with_transcript=-19bp_to_ENST00000550592_5end | ||
|cluster_id=chr12:50643695..50643708,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_11_at_LIMA1_5end | |description=CAGE_peak_11_at_LIMA1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000077!2.43e-08!19;CL:0000066!1.77e-07!254 | |ontology_enrichment_celltype=CL:0000077!2.43e-08!19;CL:0000066!1.77e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002537;8.55e-14;5!CL:0000349;4.01e-13;19!CL:0002541;1.28e-10;3!CL:0000319;4.72e-08;1!CL:0002379;4.72e-08;1!CL:0000945;3.87e-07;24 | |ontology_enrichment_celltype_v019=CL:0002537;8.55e-14;5!CL:0000349;4.01e-13;19!CL:0002541;1.28e-10;3!CL:0000319;4.72e-08;1!CL:0002379;4.72e-08;1!CL:0000945;3.87e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,8.56e-14,5;CL:0000349,3.76e-13,19;CL:0002541,1.28e-10,3;CL:0002379,3.33e-08,1;CL:0000319,6.24e-08,1;CL:0000945,3.82e-07,24;CL:0000826,3.82e-07,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!3.39e-08!235;DOID:305!4.61e-08!106;DOID:14566!9.78e-08!239;DOID:170!2.94e-07!6;DOID:0050687!4.41e-07!143 | |ontology_enrichment_disease=DOID:162!3.39e-08!235;DOID:305!4.61e-08!106;DOID:14566!9.78e-08!239;DOID:170!2.94e-07!6;DOID:0050687!4.41e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:2355;1.36e-08;1!DOID:0060060;4.72e-08;1!DOID:3620;4.72e-08;1!DOID:0060061;4.72e-08;1!DOID:3030;4.72e-08;1!DOID:3565;4.72e-08;1!DOID:8691;4.72e-08;1 | |ontology_enrichment_disease_v019=DOID:2355;1.36e-08;1!DOID:0060060;4.72e-08;1!DOID:3620;4.72e-08;1!DOID:0060061;4.72e-08;1!DOID:3030;4.72e-08;1!DOID:3565;4.72e-08;1!DOID:8691;4.72e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2355,1.31e-08,1;DOID:3620,3.33e-08,1;DOID:3565,3.33e-08,1;DOID:0060060,4.72e-08,1;DOID:0060061,4.72e-08,1;DOID:8691,4.72e-08,1;DOID:3030,6.24e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.94e-09!14;UBERON:0000158!1.94e-09!14;UBERON:0000305!6.39e-07!7 | |ontology_enrichment_uberon=UBERON:0005631!1.94e-09!14;UBERON:0000158!1.94e-09!14;UBERON:0000305!6.39e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.20e-25;10!UBERON:0000158;2.20e-25;10!UBERON:0000305;1.28e-16;7!UBERON:0003124;1.28e-10;3!UBERON:0000920;1.28e-10;3!UBERON:0000478;2.82e-10;24!UBERON:0001301;2.02e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0005631;2.20e-25;10!UBERON:0000158;2.20e-25;10!UBERON:0000305;1.28e-16;7!UBERON:0003124;1.28e-10;3!UBERON:0000920;1.28e-10;3!UBERON:0000478;2.82e-10;24!UBERON:0001301;2.02e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.93e-18,14;UBERON:0000158,4.93e-18,14;UBERON:0000305,1.14e-16,7;UBERON:0004871,1.31e-14,8;UBERON:0000920,1.28e-10,3;UBERON:0000478,2.69e-10,24;UBERON:0001301,2.02e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.74753097704138,0.791300934685361,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,2.9801228241701,3.85872770414745,4.72264687882075,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.98775256867763,0,0.100528972411631,0.648119116109707,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,1.92295876118521,4.20798449594999,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0.284136146806413,19.3383032637529,11.2846578716403,8.90766036087773,0,0,0,0,0,0,0,0,0,1.23084805461069,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,1.77977555204936,0.709163045303809,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,1.38338342632836,0.269272933229316,0.325942115766024,9.25103363222567,0.274792780205587,4.26427820814908,0,0,0,0.225595660617181,0.392125068635479,0.167821586975843,0,0,0,0.326465616318295,0,0.216388639742091,0,0,0.611030144933625,0,0,0.208843899010911,0,0,0,0,0.391329237864179,3.3989253134773,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.783939179315021,0.174118413160805,3.4945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.0824158583811665,0.13480708770837,0.492137407573744,5.24974658807864,0,0,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0,0,0,0,0,0,0,0,0,2.39460383124975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10673006216145,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,1.88212655758537,0,0,0,0,0,0,0,0,0,0.453692771289717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0.428883182749851,0,1.13352962756136,0.694567422971502,0,0.179088841081487,0,0.219284049578707,0,0.192914038270915,1.01365464391844,0,0.345430341731199,0,0,0,0,0,0.655219697692825,1.2288645437686,0.211312123358627,1.59989916683944,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,1.61364054962816,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0.560544326627578,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0.31020638566432,0,0.111855431797792,0.392600934460972,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.199882311849858,0,1.41157948686277,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,2.04602485189246,1.60778478093707,0,0,0.213233981900981,0,0.193766729508018,0.0620747142958579,0.112131862580613,0,0,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0.106727345877715,0,0.538951212639521,0,0,0,0,0.201273793591026,0.641136984606466 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.74753097704138,0.791300934685361,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,2.9801228241701,3.85872770414745,4.72264687882075,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.98775256867763,0,0.100528972411631,0.648119116109707,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,1.92295876118521,4.20798449594999,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0.284136146806413,19.3383032637529,11.2846578716403,8.90766036087773,0,0,0,0,0,0,0,0,0,1.23084805461069,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,1.77977555204936,0.709163045303809,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,1.38338342632836,0.269272933229316,0.325942115766024,9.25103363222567,0.274792780205587,4.26427820814908,0,0,0,0.225595660617181,0.392125068635479,0.167821586975843,0,0,0,0.326465616318295,0,0.216388639742091,0,0,0.611030144933625,0,0,0.208843899010911,0,0,0,0,0.391329237864179,3.3989253134773,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.783939179315021,0.174118413160805,3.4945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.0824158583811665,0.13480708770837,0.492137407573744,5.24974658807864,0,0,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0,0,0,0,0,0,0,0,0,2.39460383124975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10673006216145,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,1.88212655758537,0,0,0,0,0,0,0,0,0,0.453692771289717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0.428883182749851,0,1.13352962756136,0.694567422971502,0,0.179088841081487,0,0.219284049578707,0,0.192914038270915,1.01365464391844,0,0.345430341731199,0,0,0,0,0,0.655219697692825,1.2288645437686,0.211312123358627,1.59989916683944,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,1.61364054962816,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0.560544326627578,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0.31020638566432,0,0.111855431797792,0.392600934460972,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.199882311849858,0,1.41157948686277,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,2.04602485189246,1.60778478093707,0,0,0.213233981900981,0,0.193766729508018,0.0620747142958579,0.112131862580613,0,0,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0.106727345877715,0,0.538951212639521,0,0,0,0,0.201273793591026,0.641136984606466 | ||
|short_description=p11@LIMA1 | |short_description=p11@LIMA1 | ||
}} | }} |
Latest revision as of 18:33, 18 September 2015
Short description: | p11@LIMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LIMA1_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -19bp_to_ENST00000550592_5end |
EntrezGene: | LIMA1 |
HGNC: | 24636 |
UniProt: | F8VVQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 8.56e-14 | 5 |
extraembryonic cell | 3.76e-13 | 19 |
chorionic membrane mesenchymal stem cell | 1.28e-10 | 3 |
meningothelial cell | 3.33e-08 | 1 |
mucus secreting cell | 6.24e-08 | 1 |
lymphocyte of B lineage | 3.82e-07 | 24 |
pro-B cell | 3.82e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.93e-18 | 14 |
membranous layer | 4.93e-18 | 14 |
amnion | 1.14e-16 | 7 |
somatic layer of lateral plate mesoderm | 1.31e-14 | 8 |
egg chorion | 1.28e-10 | 3 |
extraembryonic structure | 2.69e-10 | 24 |
epididymis | 2.02e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.31e-08 | 1 |
central nervous system cancer | 3.33e-08 | 1 |
meningioma | 3.33e-08 | 1 |
non-Hodgkin lymphoma | 4.72e-08 | 1 |
cutaneous T cell lymphoma | 4.72e-08 | 1 |
mycosis fungoides | 4.72e-08 | 1 |
mucinous adenocarcinoma | 6.24e-08 | 1 |