FFCP PHASE1:Hg19::chr3:50329686..50329693,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7866 | |EntrezGene=7866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5457 | |HGNC=5457 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=157bp_to_ENST00000489569_5end | |association_with_transcript=157bp_to_ENST00000489569_5end | ||
|cluster_id=chr3:50329686..50329693,- | |||
|description=CAGE_peak_5_at_IFRD2_5end | |description=CAGE_peak_5_at_IFRD2_5end | ||
|id=chr3:50329686..50329693,- | |id=chr3:50329686..50329693,- | ||
|ontology_enrichment_celltype=CL:0000066!2.22e-07!254 | |ontology_enrichment_celltype=CL:0000066!2.22e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002032;8.20e-11;1!CL:0000557;8.20e-11;1!CL:0000319;8.20e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,9.05e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.86e-14!239;DOID:162!1.49e-13!235;DOID:2531!3.18e-08!51;DOID:0060083!3.18e-08!51;DOID:1240!6.17e-08!39 | |ontology_enrichment_disease=DOID:14566!1.86e-14!239;DOID:162!1.49e-13!235;DOID:2531!3.18e-08!51;DOID:0060083!3.18e-08!51;DOID:1240!6.17e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:3030;8.20e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,9.05e-11,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;8.20e-11;1!UBERON:0000026;8.20e-11;1!UBERON:0008784;8.20e-11;1!UBERON:0006058;8.20e-11;1!UBERON:0003663;8.20e-11;1!UBERON:0004256;8.20e-11;1!UBERON:0004708;8.20e-11;1!UBERON:0002101;8.20e-11;1!UBERON:0004709;8.20e-11;1!UBERON:0002529;8.20e-11;1!UBERON:0010538;8.20e-11;1!UBERON:0003661;8.20e-11;1!UBERON:0010890;8.20e-11;1!UBERON:0002471;8.20e-11;1!UBERON:0001383;8.20e-11;1!UBERON:0010758;8.20e-11;1!UBERON:0010707;8.20e-11;1!UBERON:0000978;8.20e-11;1!UBERON:0002103;8.20e-11;1!UBERON:0001665;8.20e-11;1!UBERON:0003823;8.20e-11;1!UBERON:0000154;8.20e-11;1!UBERON:0010709;8.20e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,6.77e-11,1;UBERON:0001389,6.77e-11,1;UBERON:0000026,6.77e-11,1;UBERON:0008784,6.77e-11,1;UBERON:0006058,6.77e-11,1;UBERON:0003663,6.77e-11,1;UBERON:0004256,6.77e-11,1;UBERON:0004708,6.77e-11,1;UBERON:0002101,6.77e-11,1;UBERON:0004709,6.77e-11,1;UBERON:0002529,6.77e-11,1;UBERON:0010538,6.77e-11,1;UBERON:0003661,6.77e-11,1;UBERON:0010890,6.77e-11,1;UBERON:0002471,6.77e-11,1;UBERON:0001383,6.77e-11,1;UBERON:0004357,6.77e-11,1;UBERON:0004347,6.77e-11,1;UBERON:0005420,6.77e-11,1;UBERON:0005732,6.77e-11,1;UBERON:0010758,6.77e-11,1;UBERON:0010707,6.77e-11,1;UBERON:0000978,6.77e-11,1;UBERON:0002103,6.77e-11,1;UBERON:0001665,6.77e-11,1;UBERON:0003823,6.77e-11,1;UBERON:0000154,6.77e-11,1;UBERON:0010709,6.77e-11,1;UBERON:0005733,6.77e-11,1;UBERON:0005730,6.77e-11,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,2.79120467188971,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0.626909442956176,0,0.136874425072884,0.251085279189606,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0.154934401160603,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.351339142772504,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,1.53316637465883,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0.264818361626438,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0.468642863667593,0,0,0.298897361103602,0,0.161872944368132,0.421352420106746,0,0.122834317311768,0,0,0.494533858557114,0,1.43723628363248,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0.276149695926898,0,0,0.201504196455281,0.169560592310488,0.386521706326594,0,0.286804595389004,0.365921118388786,0.132529768321485,0.116193942869518,0.310983165046111,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0,0,0.828147600278907,0.337169380156203,1.20505514941741,0.330881918197182,0.217879444092406,0,1.07865046528132,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0.219500570817251,0,0.201057944823262,0.0925884451585296,1.3032332212413,0,0,0,0.234817388471643,0.288732895522148,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0.766765358330422,0.492663237895943,0.088048434013226,0,0.144119953416961,0,0.190493682876507,0,0,0,0.822619941626588,0,0.571652865261156,0.224262168690721,0.87192013766656,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0.771622122786426,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0,0.254094624222463,0,2.31986643833309,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0,0,0.116210378459959,0.483437798366489,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0.340187410553031,0,0,0.541892875087706,0,0,0,0,0.438519753291869,0.261435451024901,0,0.328014645699706,0,0,0.27470839445503,0.247528499761764,0,0,0,0.290012154876366,0.308097234229289,0,0.413509717453592,0.107420244868274,0,0.170453254832202,0.0890320356467374,0,0.384380134730212,0.765676274967505,0.10115778085555,0.929691098594572,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0.211107635297664,0.329294892959902,0.379473173765715,0.349934720244983,0.577332676353072,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0.577076851905779,0.213425530045242,0.637705090915289,1.1974762285969,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0.626719583092093,2.50634477090067,1.01575066680962,0.481764225311099,0.605399121573143,0,0.687010689511529,0.307240764308458,0.223676107892416,0.333698283423817,0.390776190804081,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0,0,0,0.334330152832435,0,0.23874448473769,0,0,0,0,0.222617410045812,0.494411622680279,0.63337622438398,0,0,0.251932747854276,0.102268682502155,0.492339221844278,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0.227586896570999,0,0,0,0.291604613383254,0.520874984799877,0,0,0,0,0,0,0.21787692703798,0,0,0.227884111694002,0,0.0897576444097721,0.108647371922008,0.31900115973192,0,0,0,0,0.332423363800313,0,0,0.167821586975843,0.37950746544837,0.317873157960757,0.210998064528027,0.163232808159148,1.13082457147153,0.216388639742091,0,0.0884575645033392,0,0.593042257361244,0.494255755786011,0.522109747527277,0,0,0.234264445725339,0.364909578431332,0,0.485560759068186,0,0,0,0,7.06520071248115,0.207376382794494,1.32930774541437,0.992975867626496,0.941798755221676,1.19472429772959,0.569219092059585,0,0,0,0.0870592065804026,0,0,0.677294319023596,0.365446585430928,0.492692742319255,0,0.0882561266915003,0,0.274083849293502,0.19871461170299,0.0633107959558787,0.195551382734803,0.2404764607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| ||
|short_description=p5@IFRD2 | |short_description=p5@IFRD2 | ||
}} | }} |
Latest revision as of 19:28, 18 September 2015
Short description: | p5@IFRD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IFRD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 157bp_to_ENST00000489569_5end |
EntrezGene: | IFRD2 |
HGNC: | 5457 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 9.05e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 6.77e-11 | 1 |
soleus muscle | 6.77e-11 | 1 |
appendage | 6.77e-11 | 1 |
lower limb segment | 6.77e-11 | 1 |
multi-limb segment region | 6.77e-11 | 1 |
hindlimb muscle | 6.77e-11 | 1 |
hindlimb zeugopod muscle | 6.77e-11 | 1 |
paired limb/fin | 6.77e-11 | 1 |
limb | 6.77e-11 | 1 |
pelvic appendage | 6.77e-11 | 1 |
limb segment | 6.77e-11 | 1 |
paired limb/fin segment | 6.77e-11 | 1 |
limb muscle | 6.77e-11 | 1 |
pelvic complex muscle | 6.77e-11 | 1 |
zeugopod | 6.77e-11 | 1 |
muscle of leg | 6.77e-11 | 1 |
paired limb/fin bud | 6.77e-11 | 1 |
limb bud | 6.77e-11 | 1 |
pelvic appendage bud | 6.77e-11 | 1 |
limb/fin field | 6.77e-11 | 1 |
subdivision of organism along appendicular axis | 6.77e-11 | 1 |
appendage girdle complex | 6.77e-11 | 1 |
leg | 6.77e-11 | 1 |
hindlimb | 6.77e-11 | 1 |
triceps surae | 6.77e-11 | 1 |
hindlimb zeugopod | 6.77e-11 | 1 |
posterior region of body | 6.77e-11 | 1 |
pelvic complex | 6.77e-11 | 1 |
limb field | 6.77e-11 | 1 |
hindlimb/pelvic fin field | 6.77e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 9.05e-11 | 1 |