FFCP PHASE1:Hg19::chr3:50329767..50329778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7866 | |EntrezGene=7866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5457 | |HGNC=5457 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEI6 | |UniProt=F8WEI6 | ||
|association_with_transcript=41bp_to_ENST00000414734_5end | |association_with_transcript=41bp_to_ENST00000414734_5end | ||
|cluster_id=chr3:50329767..50329778,- | |||
|description=CAGE_peak_4_at_IFRD2_5end | |description=CAGE_peak_4_at_IFRD2_5end | ||
|id=chr3:50329767..50329778,- | |id=chr3:50329767..50329778,- | ||
|ontology_enrichment_celltype=CL:0000066!1.03e-14!254;CL:0000548!2.43e-11!679;CL:0000004!2.43e-11!679;CL:0000255!2.43e-11!679;CL:0000012!9.33e-11!682;CL:0002321!7.26e-09!248;CL:0000220!7.41e-09!246 | |ontology_enrichment_celltype=CL:0000066!1.03e-14!254;CL:0000548!2.43e-11!679;CL:0000004!2.43e-11!679;CL:0000255!2.43e-11!679;CL:0000012!9.33e-11!682;CL:0002321!7.26e-09!248;CL:0000220!7.41e-09!246 | ||
|ontology_enrichment_celltype_v019=CL:0002328;1.97e-08;3!CL:0002202;6.66e-07;9!CL:0002632;6.66e-07;9 | |ontology_enrichment_celltype_v019=CL:0002328;1.97e-08;3!CL:0002202;6.66e-07;9!CL:0002632;6.66e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.99e-08,3;CL:0002202,6.62e-07,9;CL:0002632,6.62e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.43e-16!235;DOID:14566!2.25e-16!239;DOID:305!7.82e-10!106;DOID:2531!8.17e-10!51;DOID:0060083!8.17e-10!51;DOID:0050687!8.97e-09!143;DOID:1240!1.58e-07!39 | |ontology_enrichment_disease=DOID:162!1.43e-16!235;DOID:14566!2.25e-16!239;DOID:305!7.82e-10!106;DOID:2531!8.17e-10!51;DOID:0060083!8.17e-10!51;DOID:0050687!8.97e-09!143;DOID:1240!1.58e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,5.90e-07,51;DOID:0060083,5.90e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.31e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!1.31e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.83e-20;9!UBERON:0001557;8.83e-20;9!UBERON:0000072;3.62e-10;37!UBERON:0004815;1.97e-08;3!UBERON:0002031;1.97e-08;3!UBERON:0002185;4.01e-08;5!UBERON:0000065;4.62e-08;44 | |ontology_enrichment_uberon_v019=UBERON:0001737;8.83e-20;9!UBERON:0001557;8.83e-20;9!UBERON:0000072;3.62e-10;37!UBERON:0004815;1.97e-08;3!UBERON:0002031;1.97e-08;3!UBERON:0002185;4.01e-08;5!UBERON:0000065;4.62e-08;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.33e-20,9;UBERON:0008947,3.97e-09,38;UBERON:0003258,3.97e-09,38;UBERON:0001557,1.68e-08,19;UBERON:0004815,1.99e-08,3;UBERON:0002031,1.99e-08,3;UBERON:0002185,3.99e-08,5;UBERON:0000072,8.74e-08,47 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,2.53299878168311,0,0.522371256399677,0,3.48900583986214,0,0,0,0,0,0,0,0,0.984968464614303,0.816002764977012,0,0,0.547497700291537,0.376627918784408,0.993374274723366,0.656804715599566,0.472264687882075,0,0,0,3.67768489791571,3.91567694411725,2.21852406100073,1.47187681102573,1.56386155736164,0.587200878669695,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0.12786256184353,1.0843174571537,1.50401373190767,0.144846518960824,0,0,0,0.221729397462564,0.351339142772504,0,0.364295288292542,1.48313777113772,0,0,0.132957960518865,0,0,0,0.79504962946682,0,0.347140501607594,0.56530794192401,0,1.10047216776027,0.835979866147242,0,0.35576626268671,0,0.402829317109147,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.337834441449967,1.53316637465883,0,1.09921046358244,0,0,0.872188104285069,0,0.759783069987479,0.132409180813219,0.286836620748814,1.06400514659507,1.12135520028461,0,0.74000264525148,0.311211035399766,0.404132016209064,0.653847612453835,0.151357427644931,0,0.234321431833797,0.936480230490962,0.570471821544449,0,0.352303495931295,0.809364721840658,1.12360645361799,0,0.245668634623536,0.206651562351531,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0.831192346452549,0,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0.292311015483596,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0.67824236924195,0.386521706326594,0.272746120590835,0,0.243947412259191,0.132529768321485,0.580969714347592,0.829288440122964,0.504641701751257,1.09493207722749,1.56449532329816,1.92972281457866,0,0.464367928031979,0,2.83936320095625,2.36018566109342,1.68707720918437,1.8749975364507,2.17879444092406,3.08451804844426,2.42696354688296,1.37355025587742,1.15424147083917,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0.491953754172454,0.343135620597051,0.878002283269004,1.1240175325762,1.10581869652794,0,0,0,0,0,0.352226082707465,0.577465791044295,0.462985512576611,0.761016608938393,0.790204397959275,0,0,0,0.148631162288728,1.87467667973554,0.16798212819886,0.567100388969546,0.447792613514241,0.871901815541886,1.91691339582606,0,0,0,0.288239906833923,0,0.63497894292169,0.763976851116555,0,3.4214489204541,0.411309970813294,0.901029173531752,0.285826432630578,0.672786506072164,0.87192013766656,0.51336800074665,0,0,2.535908257668,0,0,0.257207374262142,0,0.799266537048298,0,0,0,0,0,1.58390374586686,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0.289562613335158,0.61642896765115,0.716243852959582,0.336255431980582,0.197030760201927,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0.473107245101804,0,0,0,0,0.664225598535437,0.553107505625109,0,0.195801157462741,0.686286847621712,0,0,0.213455115606889,1.5156378572313,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0,0,0.771048469013278,0.177561725313127,0.492762936082855,0,1.04589340613963,1.0877350463246,0.40101294060657,0.552485933615378,0.574072240823034,0.728364672026868,0.524497659837696,0.451199612907412,0.231046011313244,0,1.46139224653261,0,0,1.19065593693561,0.647747748306418,0,0,1.00337954770971,0.509752546090077,0.831076008928724,0.447749509444357,0.219259876645935,0.261435451024901,0.769350375349168,0.328014645699706,0.325378394664303,0.206082023295445,1.73981983154852,0.990113999047056,1.14853107599234,0.650060246036521,0,0.386682873168488,1.3864375540318,0.307007349452259,1.10269257987624,0.214840489736547,0.290033387828457,0.681813019328807,0.445160178233687,0,0.384380134730212,0.510450849978337,0.2023155617111,0.464845549297286,0,0,0,0,0,0.37064843820784,0.572499546967965,0.744316738719335,0.632758849437452,0.190630193923825,1.27948895655667,0,0.95460974377781,0,0,0,0.117812402345686,0.606547444719948,4.75530963519025,0.842516912477962,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0.845086807596724,0,0.0982490410131212,1.78335525740625,0.354761064070598,0,0,1.89736586882858,1.39973888097993,0.0962221127255121,2.68120910214315,3.26672954583968,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.961416640147258,0.962479855263359,0,0.929015875628594,0.865615277858669,0.284567373393656,0.637705090915289,2.79411120005943,0.383010740264733,0.211673582723883,1.62310970137278,1.12318871245384,1.14117339516596,1.56679895773023,0,1.18504244461122,0.642352300414798,0.201799707191048,0,0.343505344755765,0.614481528616916,0.671028323677248,0.834245708559542,1.36771666781428,0.556812347790485,1.23087398947712,1.08182271390393,0.33307196799782,1.4098700508785,0.561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| ||
|short_description=p4@IFRD2 | |short_description=p4@IFRD2 | ||
}} | }} |
Latest revision as of 19:28, 18 September 2015
Short description: | p4@IFRD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IFRD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000414734_5end |
EntrezGene: | IFRD2 |
HGNC: | 5457 |
UniProt: | F8WEI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.99e-08 | 3 |
epithelial cell of tracheobronchial tree | 6.62e-07 | 9 |
epithelial cell of lower respiratory tract | 6.62e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.33e-20 | 9 |
respiratory primordium | 3.97e-09 | 38 |
endoderm of foregut | 3.97e-09 | 38 |
upper respiratory tract | 1.68e-08 | 19 |
lower respiratory tract epithelium | 1.99e-08 | 3 |
epithelium of bronchus | 1.99e-08 | 3 |
bronchus | 3.99e-08 | 5 |
segment of respiratory tract | 8.74e-08 | 47 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.90e-07 | 51 |
immune system cancer | 5.90e-07 | 51 |