FFCP PHASE1:Hg19::chr6:42531798..42531810,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:42531798..42531810,+
|short_description=p6@UBR2
|description=CAGE_peak_6_at_UBR2_5end
|association_with_transcript=0bp_to_ENST00000372899,ENST00000372901,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23304 | |EntrezGene=23304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21289 | |HGNC=21289 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWV8 | |UniProt=Q8IWV8 | ||
|association_with_transcript=0bp_to_ENST00000372899,ENST00000372901,ENST00000372903_5end | |||
|cluster_id=chr6:42531798..42531810,+ | |||
|description=CAGE_peak_6_at_UBR2_5end | |||
|id=chr6:42531798..42531810,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.19e-18!76;CL:0000557!1.89e-15!71;CL:0000839!7.11e-15!70;CL:0000763!4.57e-14!112;CL:0000049!4.57e-14!112;CL:0002009!5.66e-13!65;CL:0000860!9.90e-13!45;CL:0002057!1.26e-12!42;CL:0002194!4.84e-12!63;CL:0000576!4.84e-12!63;CL:0000040!4.84e-12!63;CL:0000559!4.84e-12!63;CL:0000738!7.83e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.46e-15;33!CL:0002057;6.46e-15;33!CL:0000576;1.09e-14;48!CL:0000766;9.02e-14;69!CL:0000473;5.98e-11;39!CL:0000234;5.98e-11;39!CL:0000094;3.15e-09;8!CL:0000763;1.58e-08;100!CL:0000081;6.42e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.31e-27,72;CL:0000557,1.57e-23,67;CL:0000763,1.73e-23,108;CL:0000049,1.73e-23,108;CL:0000860,5.33e-23,42;CL:0002057,5.33e-23,42;CL:0000839,2.09e-22,66;CL:0000473,2.38e-20,48;CL:0000234,2.38e-20,48;CL:0002009,1.05e-19,61;CL:0002194,7.09e-18,59;CL:0000576,7.09e-18,59;CL:0000040,7.09e-18,59;CL:0000559,7.09e-18,59;CL:0002032,8.87e-13,161;CL:0000837,8.87e-13,161;CL:0000738,1.31e-12,136;CL:0000037,3.87e-12,168;CL:0000988,7.08e-12,177;CL:0002031,8.52e-11,120;CL:0000094,2.75e-09,8;CL:0000081,7.50e-08,11;CL:0002087,6.00e-07,115;CL:0002393,6.14e-07,9;CL:0002397,6.14e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-17;42!CL:0000049;2.02e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.84e-15!102;UBERON:0003061!9.84e-15!102;UBERON:0007023!5.02e-14!115;UBERON:0002193!6.27e-13!112;UBERON:0001474!1.18e-12!86;UBERON:0002371!1.86e-12!80;UBERON:0004765!3.07e-10!101;UBERON:0001434!3.07e-10!101;UBERON:0002405!9.40e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.60e-07;15!UBERON:0000179;3.60e-07;15!UBERON:0000463;3.60e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.30e-22,98;UBERON:0003061,5.30e-22,98;UBERON:0002371,3.33e-19,76;UBERON:0002193,1.63e-18,108;UBERON:0001474,6.36e-18,82;UBERON:0004765,5.15e-16,90;UBERON:0002405,1.98e-13,93;UBERON:0001434,3.74e-13,100;UBERON:0003081,7.70e-10,203;UBERON:0007023,2.17e-09,114;UBERON:0000178,6.72e-07,15;UBERON:0000179,6.72e-07,15;UBERON:0000463,6.72e-07,15;UBERON:0002204,7.32e-07,167 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0,0,0.245733936501509,1.39560233594486,0,0.263766978228454,0,0.331397375727916,0,1.80808358407193,0,0,0,0.408001382488506,0.313454721478088,0.286235987131057,0.547497700291537,0.87879847716362,0.382067028739756,0.164201178899891,0.0787107813136792,1.96682138424452,1.15148819429164,0.77408061658038,1.83884244895785,0,0.369754010166788,0.0774672005803016,0.284338464974843,0.587200878669695,0,0.601633342410425,1.30206522429511,2.68698569087909,0.971680998056939,1.03030227053675,3.34415949192999,2.26725566213286,4.36651310138069,3.0215774797739,1.6446715520873,0.619412741790207,1.43846196161075,0.768482119587302,1.41889337933151,1.72372840368309,1.93645405075148,1.35426486594342,2.25890807451126,2.18324920046277,1.12361742222542,0.306083892370903,0.320929027076094,1.27867425159808,2.63881040149373,1.59570926097305,0.426224750532694,0.580418477257168,0.56738522469114,0,2.26123798731069,0,0,2.42159801053347,1.84138817993782,1.58231193720442,1.47878700418359,2.76385589954557,1.88692780957538,2.13424399178341,2.25265339262259,2.08943262706204,2.28010194992999,1.59133341759272,1.46131323011707,0,1.09227722252426,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,1.1384259382189,0,0.764546456250458,1.32171328579026,1.12101712596307,0.263384084775077,0,0,0,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0.276350017785848,0.579606171470105,0,0.267540828089713,0,0.453237370790265,0,0,0.759059076058509,0,0,0,0.150575119077773,0.255973222308837,0,1.18388626022008,0,0.201606743224732,0.267440195783507,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,0.289693037921647,0,0.973269740605272,0.0945348171640679,0,0.263504357079378,0.589405839739707,0,0,0.97364218096405,0.696518949197069,0.398873881556595,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,1.61131726843659,0,0.976248230192678,0.367663080345869,0,0.625098097988558,0.898117490504679,0.450445921933289,1.53316637465883,0,0.549605231791222,11.8602375692457,7.75560528296651,0.436094052142534,0.993943903390637,0.506522046658319,0.662045904066094,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.808264032418128,0.163461903113459,0.151357427644931,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0.408308342509787,0.122834317311768,0.413303124703062,0,0.494533858557114,0,0,0.336672227908132,0.125118519871964,0.831192346452549,0.438977620880838,0.30648779579902,0.45071417671979,0.113432183160021,1.4351170855109,0.213557388818567,0,1.20036438433761,0.206105058476878,1.8034837803194,0.37223371266318,0.843881661206331,0.876933046450788,2.01947019395292,0.368199594569197,0.484938170456436,1.42003837006646,0.302256294682921,0,0.966304265816484,0.272746120590835,0.286804595389004,0.609868530647977,0.530119073285941,0.464775771478074,0.207322110030741,0.504641701751257,1.09493207722749,0,0,0,0.464367928031979,0,0.473227200159376,0.168584690078102,0.241011029883482,0.772057809126758,0.435758888184812,0.71181185733329,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0.201057944823262,0.185176890317059,0,0,0,0.34779121492523,0,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0.738651018262192,0.702012795417713,0.891786973732369,0,0.16798212819886,0.567100388969546,0.53735113621709,0,0.383382679165211,1.47798971368783,0.968532774145487,1.86595303986695,2.16179930125442,1.51490920111656,0.571481048629521,1.14596527667483,1.17217447210047,1.71072446022705,0.102827492703324,0.901029173531752,0.285826432630578,0.112131084345361,0.43596006883328,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0.355391948742546,0,0,0,0.099972991182057,0,1.50677127429638,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.112085143993527,0.788123040807709,1.07813787429759,0.385029108839245,0.508189248444927,0,0,0.167516265334349,0,5.24304916763028,8.97484377612075,6.21623270154053,0.12269149171914,1.00034104211935,0.271265023699736,0.207970861530807,0.178428988797162,0.473107245101804,0.117141414992713,0,2.27407504055985,0,0,0,0.434418072340414,0.195801157462741,0.343143423810856,0.413536052245775,0.862856803274467,1.06727557803444,0,0,0.30239029332968,0.496215615637554,0.306923946576125,0.280660094433074,1.02511319404561,0.511707249066704,0,0,0.308419387605311,0,0.0821271560138091,0,0.464841513839837,0.966875596732978,0,0.0920809889358963,0.34444334449382,0.364182336013434,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,1.31555925987561,1.3071772551245,0,0,0.325378394664303,0.9273691048295,0.54941678891006,0.660075999364704,0,0,0,0.193341436584244,0.462145851343933,0.15350367472613,0.4135097174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| ||
|short_description=p6@UBR2 | |||
}} | }} |
Latest revision as of 20:16, 18 September 2015
Short description: | p6@UBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_UBR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372899, ENST00000372901, ENST00000372903_5end |
EntrezGene: | UBR2 |
HGNC: | 21289 |
UniProt: | Q8IWV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.31e-27 | 72 |
granulocyte monocyte progenitor cell | 1.57e-23 | 67 |
myeloid cell | 1.73e-23 | 108 |
common myeloid progenitor | 1.73e-23 | 108 |
classical monocyte | 5.33e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.33e-23 | 42 |
myeloid lineage restricted progenitor cell | 2.09e-22 | 66 |
defensive cell | 2.38e-20 | 48 |
phagocyte | 2.38e-20 | 48 |
macrophage dendritic cell progenitor | 1.05e-19 | 61 |
monopoietic cell | 7.09e-18 | 59 |
monocyte | 7.09e-18 | 59 |
monoblast | 7.09e-18 | 59 |
promonocyte | 7.09e-18 | 59 |
hematopoietic oligopotent progenitor cell | 8.87e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.87e-13 | 161 |
leukocyte | 1.31e-12 | 136 |
hematopoietic stem cell | 3.87e-12 | 168 |
hematopoietic cell | 7.08e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 8.52e-11 | 120 |
granulocyte | 2.75e-09 | 8 |
blood cell | 7.50e-08 | 11 |
nongranular leukocyte | 6.00e-07 | 115 |
intermediate monocyte | 6.14e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.30e-22 | 98 |
blood island | 5.30e-22 | 98 |
bone marrow | 3.33e-19 | 76 |
hemolymphoid system | 1.63e-18 | 108 |
bone element | 6.36e-18 | 82 |
skeletal element | 5.15e-16 | 90 |
immune system | 1.98e-13 | 93 |
skeletal system | 3.74e-13 | 100 |
lateral plate mesoderm | 7.70e-10 | 203 |
adult organism | 2.17e-09 | 114 |
blood | 6.72e-07 | 15 |
haemolymphatic fluid | 6.72e-07 | 15 |
organism substance | 6.72e-07 | 15 |
musculoskeletal system | 7.32e-07 | 167 |