FFCP PHASE1:Hg19::chr2:183291515..183291569,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5136 | |EntrezGene=5136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8774 | |HGNC=8774 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=179bp_to_ENST00000351439,uc002uor.2_5end | |association_with_transcript=179bp_to_ENST00000351439,uc002uor.2_5end | ||
|cluster_id=chr2:183291515..183291569,- | |||
|coexpression_cluster_id=C4157 | |coexpression_cluster_id=C4157 | ||
|description=CAGE_peak_5_at_PDE1A_5end | |description=CAGE_peak_5_at_PDE1A_5end | ||
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|ontology_enrichment_celltype=CL:0002334!9.61e-10!12;CL:0000327!4.18e-09!14;CL:0000499!5.51e-08!27;CL:0000153!5.77e-07!9;CL:0000447!5.77e-07!9 | |ontology_enrichment_celltype=CL:0002334!9.61e-10!12;CL:0000327!4.18e-09!14;CL:0000499!5.51e-08!27;CL:0000153!5.77e-07!9;CL:0000447!5.77e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002334;7.81e-12;12!CL:0000327;5.18e-11;15!CL:0000138;4.25e-10;6!CL:0000153;4.62e-09;9!CL:0000447;4.62e-09;9!CL:0002580;2.74e-08;3!CL:0002615;2.87e-08;3!CL:0000499;6.83e-08;28 | |ontology_enrichment_celltype_v019=CL:0002334;7.81e-12;12!CL:0000327;5.18e-11;15!CL:0000138;4.25e-10;6!CL:0000153;4.62e-09;9!CL:0000447;4.62e-09;9!CL:0002580;2.74e-08;3!CL:0002615;2.87e-08;3!CL:0000499;6.83e-08;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,6.85e-12,12;CL:0000327,4.88e-11,15;CL:0000058,3.69e-10,6;CL:0000138,3.69e-10,6;CL:0000153,3.56e-09,9;CL:0000447,3.56e-09,9;CL:0000136,3.89e-09,15;CL:0002580,2.23e-08,3;CL:0002615,3.46e-08,3;CL:0000499,6.77e-08,28 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.40e-07;29 | |ontology_enrichment_development_v019=UBERON:0008947;4.40e-07;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.44e-16!115;UBERON:0001737!4.95e-11!9;UBERON:0007100!2.38e-09!27;UBERON:0001557!2.88e-08!19;UBERON:0000948!5.44e-08!24;UBERON:0005498!5.44e-08!24;UBERON:0004140!5.44e-08!24;UBERON:0009881!5.44e-08!24;UBERON:0004141!5.44e-08!24;UBERON:0003084!5.44e-08!24;UBERON:0007005!5.44e-08!24;UBERON:0004139!5.44e-08!24;UBERON:0004291!5.44e-08!24;UBERON:0004457!3.84e-07!12;UBERON:0000042!3.84e-07!12;UBERON:0003688!4.72e-07!6;UBERON:0002358!4.72e-07!6;UBERON:0003684!4.72e-07!6;UBERON:0001178!4.72e-07!6;UBERON:0000481!6.18e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!7.44e-16!115;UBERON:0001737!4.95e-11!9;UBERON:0007100!2.38e-09!27;UBERON:0001557!2.88e-08!19;UBERON:0000948!5.44e-08!24;UBERON:0005498!5.44e-08!24;UBERON:0004140!5.44e-08!24;UBERON:0009881!5.44e-08!24;UBERON:0004141!5.44e-08!24;UBERON:0003084!5.44e-08!24;UBERON:0007005!5.44e-08!24;UBERON:0004139!5.44e-08!24;UBERON:0004291!5.44e-08!24;UBERON:0004457!3.84e-07!12;UBERON:0000042!3.84e-07!12;UBERON:0003688!4.72e-07!6;UBERON:0002358!4.72e-07!6;UBERON:0003684!4.72e-07!6;UBERON:0001178!4.72e-07!6;UBERON:0000481!6.18e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.52e-22;9!UBERON:0001557;1.52e-22;9!UBERON:0003688;2.04e-10;6!UBERON:0002358;2.04e-10;6!UBERON:0003684;2.04e-10;6!UBERON:0001178;2.04e-10;6!UBERON:0004457;2.62e-09;9!UBERON:0000042;2.62e-09;9!UBERON:0001443;2.14e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.52e-22;9!UBERON:0001557;1.52e-22;9!UBERON:0003688;2.04e-10;6!UBERON:0002358;2.04e-10;6!UBERON:0003684;2.04e-10;6!UBERON:0001178;2.04e-10;6!UBERON:0004457;2.62e-09;9!UBERON:0000042;2.62e-09;9!UBERON:0001443;2.14e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.68e-22,9;UBERON:0003688,2.64e-10,6;UBERON:0002358,2.64e-10,6;UBERON:0003684,2.64e-10,6;UBERON:0001178,2.64e-10,6;UBERON:0001557,1.38e-09,19;UBERON:0001443,1.49e-07,11;UBERON:0004457,9.12e-07,12;UBERON:0000042,9.12e-07,12 | |||
|phase1_expression=8.3572054464456,1.71280419112787,10.7125347112938,2.00146596706261,3.12872766099101,2.61701557230111,0,0,0,0,0,0,0,1.11389717664042,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,1.02290049474824,5.78302643815306,4.51204119572301,6.22840031531542,2.3858578411533,1.45990461090791,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,1.12135520028461,0,0,17.7390290177867,0.808264032418128,1.30769522490767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0.179389635688862,0.427114777637135,0.423863802319124,0,0,0.257640540045629,0.37223371266318,0,0,0.757301322732344,0.276149695926898,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3218396401599,0.721879481669586,9.22793040310782,7.75489574359268,6.02527574708705,6.61763836394364,6.972142210957,4.50814176311084,5.25842101824641,8.04508007013919,9.23393176671337,0,0,2.057870056657,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0.87192013766656,1.0267360014933,0,0,0.845302752556,0.26593811658487,0,0,0,0,16.1565132833707,0.542621605391443,0,0,14.2156779497018,0,1.20575750823834,0,0,0,0,0,0,1.14861935834114,4.27910715122155,0.144781306667579,1.84928690295345,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,5.27573414392302,2.00068208423871,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,5.95458738765064,7.82656063769118,2.80660094433074,6.27881831352935,2.04682899626681,0.64341568457443,1.48418066444991,0.925258162815933,0.355123450626254,2.21743321237285,0,3.48631135379878,0,0,0,0.229628896329213,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,1.54048617114644,0.15350367472613,0.551346289938122,1.6113036730241,0,0.596586391912706,0.356128142586949,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,1.116475108079,0.949138274156178,2.2875623270859,0,0,0,0,0.179872457583315,0.54907405947211,0.942499218765491,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0.211107635297664,1.64647446479951,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0.87754158861589,0.871507708151921,0,0.538651809526579,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0.30607276163049,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,1.35784623083787,0,0.677942222341597,0,0,0.126621591911757,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0.859530882839914,0,0.558564802544508,1.14580212005842,0.717873024576814,0.399358000997982,0.429226048136571,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,10.4023533634942,1.41627387964495,0,17.3908719152859,0,0.714695326373367,0.662091970365432,0.25426853765475,0,6.91377192961014,2.93928624098468,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0.106787412567695,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0.306345576763462,0,1.09937867375164,0,0,0,0.573409195690071,1.10929051536852,0.558867626472451,0,0,0,0,0,0,0,3.4328604663981,0.233713309847224,9.98650550704704,3.21985108967651,4.0250864280412,18.6860356535273,0,5.74677510300308,0.932623203496683,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,1.37358282073117,3.70424437642511,20.1895837165842,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0.175871244359621,0,0,0.336283722218824,1.82089681270989,0.455324382702595,0.0887023701626388,0,0,0.339848664884159,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,3.65263488203798,0,0,1.00067161847319,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0.255640214277473,0.423387050190929,7.56052666195365,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0,0.463044948647668,1.31135736302374,0,2.20633489578515,0,0,0.594092800654172,0.8453114551668,0.169927114687817,0.281951753939561,0,0,0,0,0,0,0.458729283404541,0.286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|phase1_expression=8.3572054464456,1.71280419112787,10.7125347112938,2.00146596706261,3.12872766099101,2.61701557230111,0,0,0,0,0,0,0,1.11389717664042,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,1.02290049474824,5.78302643815306,4.51204119572301,6.22840031531542,2.3858578411533,1.45990461090791,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,1.12135520028461,0,0,17.7390290177867,0.808264032418128,1.30769522490767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0.179389635688862,0.427114777637135,0.423863802319124,0,0,0.257640540045629,0.37223371266318,0,0,0.757301322732344,0.276149695926898,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3218396401599,0.721879481669586,9.22793040310782,7.75489574359268,6.02527574708705,6.61763836394364,6.972142210957,4.50814176311084,5.25842101824641,8.04508007013919,9.23393176671337,0,0,2.057870056657,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0.87192013766656,1.0267360014933,0,0,0.845302752556,0.26593811658487,0,0,0,0,16.1565132833707,0.542621605391443,0,0,14.2156779497018,0,1.20575750823834,0,0,0,0,0,0,1.14861935834114,4.27910715122155,0.144781306667579,1.84928690295345,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,5.27573414392302,2.00068208423871,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,5.95458738765064,7.82656063769118,2.80660094433074,6.27881831352935,2.04682899626681,0.64341568457443,1.48418066444991,0.925258162815933,0.355123450626254,2.21743321237285,0,3.48631135379878,0,0,0,0.229628896329213,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,1.54048617114644,0.15350367472613,0.551346289938122,1.6113036730241,0,0.596586391912706,0.356128142586949,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,1.116475108079,0.949138274156178,2.2875623270859,0,0,0,0,0.179872457583315,0.54907405947211,0.942499218765491,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0.211107635297664,1.64647446479951,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0.87754158861589,0.871507708151921,0,0.538651809526579,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0.30607276163049,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,1.35784623083787,0,0.677942222341597,0,0,0.126621591911757,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0.859530882839914,0,0.558564802544508,1.14580212005842,0.717873024576814,0.399358000997982,0.429226048136571,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,10.4023533634942,1.41627387964495,0,17.3908719152859,0,0.714695326373367,0.662091970365432,0.25426853765475,0,6.91377192961014,2.93928624098468,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0.106787412567695,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0.306345576763462,0,1.09937867375164,0,0,0,0.573409195690071,1.10929051536852,0.558867626472451,0,0,0,0,0,0,0,3.4328604663981,0.233713309847224,9.98650550704704,3.21985108967651,4.0250864280412,18.6860356535273,0,5.74677510300308,0.932623203496683,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,1.37358282073117,3.70424437642511,20.1895837165842,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0.175871244359621,0,0,0.336283722218824,1.82089681270989,0.455324382702595,0.0887023701626388,0,0,0.339848664884159,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,3.65263488203798,0,0,1.00067161847319,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0.255640214277473,0.423387050190929,7.56052666195365,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0,0.463044948647668,1.31135736302374,0,2.20633489578515,0,0,0.594092800654172,0.8453114551668,0.169927114687817,0.281951753939561,0,0,0,0,0,0,0.458729283404541,0.286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| ||
|short_description=p5@PDE1A | |short_description=p5@PDE1A | ||
}} | }} |
Latest revision as of 22:03, 18 September 2015
Short description: | p5@PDE1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PDE1A_5end |
Coexpression cluster: | C4157_Mesenchymal_mesenchymal_Fibroblast_Adipocyte_Chondrocyte_Nucleus_mesodermal |
Association with transcript: | 179bp_to_ENST00000351439, uc002uor.2_5end |
EntrezGene: | PDE1A |
HGNC: | 8774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 6.85e-12 | 12 |
extracellular matrix secreting cell | 4.88e-11 | 15 |
chondroblast | 3.69e-10 | 6 |
chondrocyte | 3.69e-10 | 6 |
GAG secreting cell | 3.56e-09 | 9 |
carbohydrate secreting cell | 3.56e-09 | 9 |
fat cell | 3.89e-09 | 15 |
preadipocyte of the breast | 2.23e-08 | 3 |
adipocyte of omentum tissue | 3.46e-08 | 3 |
stromal cell | 6.77e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.68e-22 | 9 |
omentum | 2.64e-10 | 6 |
peritoneum | 2.64e-10 | 6 |
abdominal cavity | 2.64e-10 | 6 |
visceral peritoneum | 2.64e-10 | 6 |
upper respiratory tract | 1.38e-09 | 19 |
chest | 1.49e-07 | 11 |
cavity lining | 9.12e-07 | 12 |
serous membrane | 9.12e-07 | 12 |