FFCP PHASE1:Hg19::chr19:47354061..47354076,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1175 | |EntrezGene=1175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=565 | |HGNC=565 | ||
|TSSclassifier=strong | |||
|UniProt=P53680 | |UniProt=P53680 | ||
|association_with_transcript=126bp_to_ENST00000263270,ENST00000352203,NM_004069,NM_021575,uc002pft.1,uc002pfu.1_5end | |association_with_transcript=126bp_to_ENST00000263270,ENST00000352203,NM_004069,NM_021575,uc002pft.1,uc002pfu.1_5end | ||
|cluster_id=chr19:47354061..47354076,- | |||
|coexpression_cluster_id=C843 | |||
|description=CAGE_peak_2_at_AP2S1_5end | |description=CAGE_peak_2_at_AP2S1_5end | ||
|id=chr19:47354061..47354076,- | |id=chr19:47354061..47354076,- | ||
|ontology_enrichment_celltype=CL:0000548!1.71e-33!679;CL:0000004!1.71e-33!679;CL:0000255!1.71e-33!679;CL:0000012!2.64e-32!682;CL:0002321!1.50e-30!248;CL:0000220!2.29e-30!246;CL:0000222!2.09e-29!119;CL:0000144!6.53e-28!625;CL:0000055!1.25e-26!180;CL:0002371!4.08e-24!591;CL:0000183!3.89e-17!59;CL:0000003!5.54e-17!722;CL:0000680!9.50e-16!57;CL:0000056!9.50e-16!57;CL:0000355!9.50e-16!57;CL:0000187!2.16e-15!54;CL:0000066!7.90e-15!254;CL:0000393!1.31e-14!60;CL:0000211!1.31e-14!60;CL:0000192!2.01e-13!42;CL:0000514!2.01e-13!42;CL:0000213!4.72e-13!57;CL:0000215!4.72e-13!57;CL:0002078!5.03e-13!44;CL:0000359!6.15e-13!32;CL:0000115!6.70e-13!35;CL:0000063!2.28e-11!578;CL:0000057!5.29e-11!75;CL:0000071!3.62e-09!18;CL:0002546!3.62e-09!18;CL:0002139!1.45e-08!24;CL:0002494!6.55e-07!16 | |ontology_enrichment_celltype=CL:0000548!1.71e-33!679;CL:0000004!1.71e-33!679;CL:0000255!1.71e-33!679;CL:0000012!2.64e-32!682;CL:0002321!1.50e-30!248;CL:0000220!2.29e-30!246;CL:0000222!2.09e-29!119;CL:0000144!6.53e-28!625;CL:0000055!1.25e-26!180;CL:0002371!4.08e-24!591;CL:0000183!3.89e-17!59;CL:0000003!5.54e-17!722;CL:0000680!9.50e-16!57;CL:0000056!9.50e-16!57;CL:0000355!9.50e-16!57;CL:0000187!2.16e-15!54;CL:0000066!7.90e-15!254;CL:0000393!1.31e-14!60;CL:0000211!1.31e-14!60;CL:0000192!2.01e-13!42;CL:0000514!2.01e-13!42;CL:0000213!4.72e-13!57;CL:0000215!4.72e-13!57;CL:0002078!5.03e-13!44;CL:0000359!6.15e-13!32;CL:0000115!6.70e-13!35;CL:0000063!2.28e-11!578;CL:0000057!5.29e-11!75;CL:0000071!3.62e-09!18;CL:0002546!3.62e-09!18;CL:0002139!1.45e-08!24;CL:0002494!6.55e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.43e-12;32!CL:0000115;2.29e-11;36!CL:0000192;8.89e-10;43!CL:0002078;3.21e-09;45!CL:0000071;3.44e-09;18!CL:0000187;6.83e-09;55!CL:0002139;1.47e-08;24!CL:0000213;6.75e-08;58!CL:0000215;6.75e-08;58!CL:0000134;7.94e-08;55!CL:0000393;1.45e-07;61!CL:0000211;1.45e-07;61!CL:0002494;6.83e-07;16!CL:0000048;9.35e-07;58!CL:0000723;9.85e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.12e-31,250;CL:0000222,4.78e-30,121;CL:0000680,8.66e-16,58;CL:0000056,8.66e-16,58;CL:0000355,8.66e-16,58;CL:0000187,1.99e-15,55;CL:0000066,1.02e-14,253;CL:0000393,1.16e-14,61;CL:0000211,1.16e-14,61;CL:0002078,1.49e-13,45;CL:0000213,1.50e-13,58;CL:0000215,1.50e-13,58;CL:0000115,1.89e-13,36;CL:0000192,1.92e-13,43;CL:0000514,1.92e-13,43;CL:0000359,6.14e-13,32;CL:0000057,2.28e-11,76;CL:0000071,3.61e-09,18;CL:0002546,3.61e-09,18;CL:0002139,1.45e-08,24;CL:0002494,6.54e-07,16;CL:0000076,7.83e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000514;8.89e-10;43!CL:0002546;3.44e-09;18!CL:0000355;1.75e-08;58!CL:0000222;2.46e-08;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!8.22e-21!84;UBERON:0002049!8.70e-21!79;UBERON:0007798!8.70e-21!79;UBERON:0003914!1.61e-18!118;UBERON:0001981!2.05e-18!60;UBERON:0007500!2.05e-18!60;UBERON:0004537!2.05e-18!60;UBERON:0006965!2.05e-18!60;UBERON:0000055!8.52e-18!69;UBERON:0000914!1.04e-17!83;UBERON:0002329!1.04e-17!83;UBERON:0003077!1.04e-17!83;UBERON:0003059!1.04e-17!83;UBERON:0007282!1.04e-17!83;UBERON:0009618!1.04e-17!83;UBERON:0007285!1.04e-17!83;UBERON:0000490!4.54e-17!138;UBERON:0004290!9.71e-17!70;UBERON:0000486!1.04e-16!82;UBERON:0005256!3.48e-16!143;UBERON:0001637!3.55e-16!42;UBERON:0003509!3.55e-16!42;UBERON:0004572!3.55e-16!42;UBERON:0002100!2.61e-15!216;UBERON:0004535!1.59e-14!110;UBERON:0001009!6.10e-14!113;UBERON:0001134!2.06e-13!61;UBERON:0002036!2.06e-13!61;UBERON:0003082!2.06e-13!61;UBERON:0000926!1.74e-12!448;UBERON:0004120!1.74e-12!448;UBERON:0006603!1.74e-12!448;UBERON:0002385!3.08e-12!63;UBERON:0001015!3.08e-12!63;UBERON:0000383!3.08e-12!63;UBERON:0004573!1.24e-11!33;UBERON:0004571!1.24e-11!33;UBERON:0003104!6.51e-10!238;UBERON:0009142!6.51e-10!238;UBERON:0001986!3.62e-09!18;UBERON:0004638!3.62e-09!18;UBERON:0004852!3.62e-09!18;UBERON:0006914!9.41e-09!25;UBERON:0000487!1.25e-08!22;UBERON:0000119!2.27e-08!312;UBERON:0000468!3.24e-08!659;UBERON:0000483!4.77e-08!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;1.19e-11;56!UBERON:0001981;1.19e-11;56!UBERON:0004537;1.19e-11;56!UBERON:0001637;1.20e-11;42!UBERON:0003509;1.20e-11;42!UBERON:0004572;1.20e-11;42!UBERON:0004573;1.36e-10;33!UBERON:0004571;1.36e-10;33!UBERON:0003914;1.09e-09;74!UBERON:0004638;3.44e-09;18!UBERON:0001986;3.44e-09;18!UBERON:0004852;3.44e-09;18!UBERON:0002049;3.56e-09;75!UBERON:0007798;3.56e-09;75!UBERON:0000055;4.13e-09;65!UBERON:0000490;7.68e-09;33!UBERON:0006914;1.04e-08;25!UBERON:0000487;1.34e-08;22 | |||
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| ||
|short_description=p2@AP2S1 | |short_description=p2@AP2S1 | ||
}} | }} |
Latest revision as of 22:05, 18 September 2015
Short description: | p2@AP2S1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AP2S1_5end |
Coexpression cluster: | C843_Alveolar_Mesenchymal_Hepatic_Placental_Renal_Smooth_Fibroblast |
Association with transcript: | 126bp_to_ENST00000263270, ENST00000352203, NM_004069, NM_021575, uc002pft.1, uc002pfu.1_5end |
EntrezGene: | AP2S1 |
HGNC: | 565 |
UniProt: | P53680 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.12e-31 | 250 |
mesodermal cell | 4.78e-30 | 121 |
muscle precursor cell | 8.66e-16 | 58 |
myoblast | 8.66e-16 | 58 |
multi-potent skeletal muscle stem cell | 8.66e-16 | 58 |
muscle cell | 1.99e-15 | 55 |
epithelial cell | 1.02e-14 | 253 |
electrically responsive cell | 1.16e-14 | 61 |
electrically active cell | 1.16e-14 | 61 |
meso-epithelial cell | 1.49e-13 | 45 |
lining cell | 1.50e-13 | 58 |
barrier cell | 1.50e-13 | 58 |
endothelial cell | 1.89e-13 | 36 |
smooth muscle cell | 1.92e-13 | 43 |
smooth muscle myoblast | 1.92e-13 | 43 |
vascular associated smooth muscle cell | 6.14e-13 | 32 |
fibroblast | 2.28e-11 | 76 |
blood vessel endothelial cell | 3.61e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.61e-09 | 18 |
endothelial cell of vascular tree | 1.45e-08 | 24 |
cardiocyte | 6.54e-07 | 16 |
squamous epithelial cell | 7.83e-07 | 63 |