FFCP PHASE1:Hg19::chr11:62649386..62649403,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:62649386..62649403,+ to FFCP PHASE1:Hg19::chr11:62649386..62649403,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6520 | |EntrezGene=6520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11026 | |HGNC=11026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=109bp_to_ENST00000457660_5end | |||
|cluster_id=chr11:62649386..62649403,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_14_at_SLC3A2_5end | |||
|id=chr11:62649386..62649403,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.88e-12!254;CL:0000012!4.38e-08!682;CL:0000548!6.20e-08!679;CL:0000004!6.20e-08!679;CL:0000255!6.20e-08!679 | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.41e-15;3!CL:0002363;1.31e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.29e-15,3;CL:0002363,1.89e-10,2;CL:0000008,1.89e-10,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.31e-10;2 | |||
|ontology_enrichment_disease=DOID:305!1.03e-10!106;DOID:0050687!1.90e-10!143;DOID:14566!8.43e-08!239;DOID:162!9.53e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.53e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.12e-08,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.25e-11;4!UBERON:0003566;1.31e-10;2!UBERON:0001777;1.31e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,7.88e-12,4;UBERON:0004340,7.88e-12,4;UBERON:0003566,1.89e-10,2;UBERON:0001777,1.89e-10,2;UBERON:0003124,6.24e-07,7 | |||
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| ||
|short_description=p14@SLC3A2 | |||
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Latest revision as of 22:08, 18 September 2015
Short description: | p14@SLC3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SLC3A2_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 109bp_to_ENST00000457660_5end |
EntrezGene: | SLC3A2 |
HGNC: | 11026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.29e-15 | 3 |
keratocyte | 1.89e-10 | 2 |
migratory cranial neural crest cell | 1.89e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
placenta | 7.88e-12 | 4 |
allantois | 7.88e-12 | 4 |
head connective tissue | 1.89e-10 | 2 |
substantia propria of cornea | 1.89e-10 | 2 |
chorion | 6.24e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.12e-08 | 14 |