FFCP PHASE1:Hg19::chr21:47421213..47421229,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1291 | |EntrezGene=1291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2211 | |HGNC=2211 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TBN2 | |UniProt=Q8TBN2 | ||
|association_with_transcript=102bp_to_ENST00000498614,uc002zhv.1_5end | |association_with_transcript=102bp_to_ENST00000498614,uc002zhv.1_5end | ||
|cluster_id=chr21:47421213..47421229,+ | |||
|description=CAGE_peak_26_at_COL6A1_5end | |description=CAGE_peak_26_at_COL6A1_5end | ||
|id=chr21:47421213..47421229,+ | |id=chr21:47421213..47421229,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.60e-28!180;CL:0000057!9.31e-17!75;CL:0000680!6.54e-13!57;CL:0000056!6.54e-13!57;CL:0000355!6.54e-13!57;CL:0000183!3.13e-11!59;CL:0000187!5.00e-11!54;CL:0000393!2.75e-10!60;CL:0000211!2.75e-10!60;CL:0000192!4.99e-08!42;CL:0000514!4.99e-08!42;CL:0000188!1.00e-06!9 | |ontology_enrichment_celltype=CL:0000055!8.60e-28!180;CL:0000057!9.31e-17!75;CL:0000680!6.54e-13!57;CL:0000056!6.54e-13!57;CL:0000355!6.54e-13!57;CL:0000183!3.13e-11!59;CL:0000187!5.00e-11!54;CL:0000393!2.75e-10!60;CL:0000211!2.75e-10!60;CL:0000192!4.99e-08!42;CL:0000514!4.99e-08!42;CL:0000188!1.00e-06!9 | ||
|ontology_enrichment_celltype_v019=CL:0002575;8.82e-13;2!CL:0002549;2.34e-12;2!CL:0002554;2.34e-12;2!CL:0000632;1.60e-08;3!CL:0000135;3.01e-08;3!CL:0000594;3.01e-08;3!CL:0000388;3.01e-08;3!CL:0000680;1.38e-07;7!CL:0000511;8.47e-07;1!CL:0002625;8.47e-07;1!CL:0002550;8.47e-07;1!CL:0000216;8.47e-07;1!CL:0002591;8.47e-07;1!CL:0000669;8.49e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,9.95e-13,2;CL:0002549,1.41e-12,2;CL:0002554,1.49e-12,2;CL:0000632,1.73e-08,3;CL:0000135,2.60e-08,3;CL:0000388,2.60e-08,3;CL:0000057,2.80e-08,76;CL:0000594,3.76e-08,3;CL:0000680,1.01e-07,58;CL:0000056,1.01e-07,58;CL:0000355,1.01e-07,58;CL:0000511,5.69e-07,1;CL:0002625,5.69e-07,1;CL:0000216,5.69e-07,1;CL:0000669,9.01e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.71e-16!70;UBERON:0000914!1.32e-15!83;UBERON:0002329!1.32e-15!83;UBERON:0003077!1.32e-15!83;UBERON:0003059!1.32e-15!83;UBERON:0007282!1.32e-15!83;UBERON:0009618!1.32e-15!83;UBERON:0007285!1.32e-15!83;UBERON:0000486!3.37e-14!82;UBERON:0001134!3.55e-14!61;UBERON:0002036!3.55e-14!61;UBERON:0003082!3.55e-14!61;UBERON:0002385!2.69e-13!63;UBERON:0001015!2.69e-13!63;UBERON:0000383!2.69e-13!63;UBERON:0005256!3.08e-11!143;UBERON:0000475!1.36e-10!365;UBERON:0002100!1.17e-07!216;UBERON:0003102!8.87e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;2.34e-12;2!UBERON:0005358;2.34e-12;2!UBERON:0001886;2.34e-12;2!UBERON:0004086;2.34e-12;2!UBERON:0005282;2.34e-12;2!UBERON:0005281;2.34e-12;2!UBERON:0007846;3.01e-08;3!UBERON:0000043;3.01e-08;3!UBERON:0007845;3.01e-08;3!UBERON:0001136;8.47e-07;1!UBERON:0001343;8.47e-07;1!UBERON:0004910;8.47e-07;1!UBERON:0004813;8.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.41e-12,2;UBERON:0005358,1.41e-12,2;UBERON:0001886,1.41e-12,2;UBERON:0004086,1.41e-12,2;UBERON:0005282,1.41e-12,2;UBERON:0005281,1.41e-12,2;UBERON:0007846,2.60e-08,3;UBERON:0000043,2.60e-08,3;UBERON:0007845,2.60e-08,3;UBERON:0002329,2.19e-07,71;UBERON:0003059,2.19e-07,71;UBERON:0007282,2.19e-07,71;UBERON:0004290,2.19e-07,71;UBERON:0009618,2.19e-07,71;UBERON:0003077,2.95e-07,72;UBERON:0007285,2.95e-07,72;UBERON:0007524,3.95e-07,73;UBERON:0001134,4.07e-07,62;UBERON:0002036,4.07e-07,62;UBERON:0003082,4.07e-07,62;UBERON:0001136,5.69e-07,1;UBERON:0001343,5.69e-07,1;UBERON:0004910,5.69e-07,1;UBERON:0005154,5.69e-07,1;UBERON:0005295,5.69e-07,1;UBERON:0004813,5.69e-07,1;UBERON:0005297,5.69e-07,1;UBERON:0005294,5.69e-07,1;UBERON:0010141,5.69e-07,1;UBERON:0005891,5.69e-07,1;UBERON:0002385,7.67e-07,64;UBERON:0001015,7.67e-07,64;UBERON:0000383,7.67e-07,64 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0,0,0.893922188854576,0,2.53299878168311,0.631719873426831,0.783556884599516,0,0,0,0,0.74259811776028,0.662794751455832,1.34465029290355,1.20538905604795,0,0,0.61560529038394,1.02000345622126,0.940364164434263,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0,0.724232594804119,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0,0.560677600142307,1.06748995729705,0,0,0.538842688278752,0.326923806226917,1.51357427644931,2.88087962239999,1.17160715916898,0,0,0.747243402759005,0.587172493218824,0.647491777472526,0.280901613404497,0.816616685019573,0.368502951935304,1.75653827998801,0,0.494533858557114,1.82032272387605,2.15585442544872,0,0.125118519871964,0,0,0.30648779579902,0.45071417671979,0,0,0.427114777637135,0.211931901159562,0.600182192168805,0.103052529238439,0,0,0.675105328965065,0.0974370051611986,0.252433774244115,0.368199594569197,0.323292113637624,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,2.76269842704961,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,2.07986957055916,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.560655421726804,0,0.2933531432838,0.258543431515556,10.7296933755565,0,0,1.04007436911366,0,0,0.266422179016099,0.285955987316295,3.25572963234866,0,0.65147236858747,0.710783897485092,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,1.30303176000821,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,1.89885516589815,1.03985430765404,0.535286966391485,0.157702415033935,0.585707074963566,0,0,0,0,0.368738337083406,0.434418072340414,2.54541504701563,2.05886054286514,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0.256278298511402,0,0.965123526861645,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.813472649219715,0,0,0,0.229628896329213,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0.650060246036521,1.6068392984416,0.580024309752732,0.924291702687866,0.460511024178389,0.551346289938122,1.07420244868274,0.580066775656914,1.27839941124151,0.623224249527161,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0,0.744316738719335,0.316379424718726,0.762520775695299,1.79128453917934,0,0.318203247925937,0,0.899362287916574,0.274537029736055,0.824686816419805,0,1.58510321173008,0.421258456238981,0.48763373908959,0.487426979262569,1.05650146756755,0.409499734223957,0.424216295861138,1.13008116620243,0.551365343546124,0,0,2.89387767133344,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0.633322905892992,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0.222886768554957,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0.399358000997982,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0.701139929541673,0,0,0.754703705257725,0,0.228840068396924,0.453692771289717,0,0.295710299979268,0,0,0,0.414706207840855,0.797525143673985,0.521745061811734,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0.343395705182793,1.01024846629776,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0.20170506870352,0,0,0,0,0,0,0,0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| ||
|short_description=p26@COL6A1 | |short_description=p26@COL6A1 | ||
}} | }} |
Latest revision as of 22:11, 18 September 2015
Short description: | p26@COL6A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_COL6A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 102bp_to_ENST00000498614, uc002zhv.1_5end |
EntrezGene: | COL6A1 |
HGNC: | 2211 |
UniProt: | Q8TBN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 9.95e-13 | 2 |
fibroblast of choroid plexus | 1.41e-12 | 2 |
fibroblast of lymphatic vessel | 1.49e-12 | 2 |
hepatic stellate cell | 1.73e-08 | 3 |
fibrocyte | 2.60e-08 | 3 |
tendon cell | 2.60e-08 | 3 |
fibroblast | 2.80e-08 | 76 |
skeletal muscle satellite cell | 3.76e-08 | 3 |
muscle precursor cell | 1.01e-07 | 58 |
myoblast | 1.01e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.01e-07 | 58 |
androgen binding protein secreting cell | 5.69e-07 | 1 |
seminiferous tubule epithelial cell | 5.69e-07 | 1 |
Sertoli cell | 5.69e-07 | 1 |
pericyte cell | 9.01e-07 | 4 |