FFCP PHASE1:Hg19::chr19:47523058..47523114,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=4861 | |EntrezGene=4861 | ||
| Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002pfw.2,uc002pfx.2_5end | |association_with_transcript=0bp_to_uc002pfw.2,uc002pfx.2_5end | ||
|cluster_id=chr19:47523058..47523114,+ | |||
|description=CAGE_peak_1_at_NPAS1_5end | |description=CAGE_peak_1_at_NPAS1_5end | ||
|id=chr19:47523058..47523114,+ | |id=chr19:47523058..47523114,+ | ||
Latest revision as of 22:21, 18 September 2015
| Short description: | p1@NPAS1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_NPAS1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_uc002pfw.2, uc002pfx.2_5end |
| EntrezGene: | NPAS1 |
| HGNC: | 7894 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@NPAS1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 9.99e-12 | 76 |
| preadipocyte | 9.93e-10 | 12 |
| electrically responsive cell | 1.54e-09 | 61 |
| electrically active cell | 1.54e-09 | 61 |
| skin fibroblast | 3.16e-07 | 23 |
| muscle precursor cell | 8.81e-07 | 58 |
| myoblast | 8.81e-07 | 58 |
| multi-potent skeletal muscle stem cell | 8.81e-07 | 58 |
| neuron | 9.63e-07 | 6 |
| neuroblast | 9.63e-07 | 6 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of cerebral cortex | 5.06e-15 | 22 |
| cerebral cortex | 9.03e-15 | 25 |
| pallium | 9.03e-15 | 25 |
| neocortex | 6.94e-14 | 20 |
| cerebral hemisphere | 4.49e-13 | 32 |
| brain grey matter | 1.21e-12 | 34 |
| gray matter | 1.21e-12 | 34 |
| telencephalon | 8.25e-12 | 34 |
| regional part of telencephalon | 8.91e-12 | 32 |
| central nervous system | 2.10e-09 | 81 |
Showing 1 to 10 of 22 entries
