FFCP PHASE1:Hg19::chr6:43484621..43484706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25844 | |EntrezGene=25844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21023 | |HGNC=21023 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZM5,D6RA04,D6RBQ1,D6RFI3,E7EQR8,D6RGI4,Q5JTD5 | |UniProt=Q9GZM5,D6RA04,D6RBQ1,D6RFI3,E7EQR8,D6RGI4,Q5JTD5 | ||
|association_with_transcript=0bp_to_ENST00000259737,ENST00000416380,ENST00000455768,ENST00000460547,ENST00000460903,ENST00000503972,ENST00000506469,ENST00000509315,uc003ovl.1,uc003ovm.1,uc010jyr.1,uc010jys.1,uc010jyt.1,uc011dvk.1_5end | |association_with_transcript=0bp_to_ENST00000259737,ENST00000416380,ENST00000455768,ENST00000460547,ENST00000460903,ENST00000503972,ENST00000506469,ENST00000509315,uc003ovl.1,uc003ovm.1,uc010jyr.1,uc010jys.1,uc010jyt.1,uc011dvk.1_5end | ||
|cluster_id=chr6:43484621..43484706,- | |||
|coexpression_cluster_id=C1147 | |||
|description=CAGE_peak_1_at_YIPF3_5end | |description=CAGE_peak_1_at_YIPF3_5end | ||
|id=chr6:43484621..43484706,- | |id=chr6:43484621..43484706,- | ||
|ontology_enrichment_celltype=CL:0000055!1.63e-19!180;CL:0000220!9.31e-16!246;CL:0002321!2.37e-15!248;CL:0000192!5.24e-15!42;CL:0000514!5.24e-15!42;CL:0000183!8.80e-15!59;CL:0000222!1.31e-14!119;CL:0000359!7.92e-13!32;CL:0000680!8.05e-13!57;CL:0000056!8.05e-13!57;CL:0000355!8.05e-13!57;CL:0000187!1.75e-12!54;CL:0000393!1.71e-10!60;CL:0000211!1.71e-10!60;CL:0002371!1.67e-09!591;CL:0000548!3.66e-09!679;CL:0000004!3.66e-09!679;CL:0000255!3.66e-09!679;CL:0000144!4.15e-09!625;CL:0000012!1.33e-08!682;CL:0000057!2.19e-08!75 | |ontology_enrichment_celltype=CL:0000055!1.63e-19!180;CL:0000220!9.31e-16!246;CL:0002321!2.37e-15!248;CL:0000192!5.24e-15!42;CL:0000514!5.24e-15!42;CL:0000183!8.80e-15!59;CL:0000222!1.31e-14!119;CL:0000359!7.92e-13!32;CL:0000680!8.05e-13!57;CL:0000056!8.05e-13!57;CL:0000355!8.05e-13!57;CL:0000187!1.75e-12!54;CL:0000393!1.71e-10!60;CL:0000211!1.71e-10!60;CL:0002371!1.67e-09!591;CL:0000548!3.66e-09!679;CL:0000004!3.66e-09!679;CL:0000255!3.66e-09!679;CL:0000144!4.15e-09!625;CL:0000012!1.33e-08!682;CL:0000057!2.19e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.28e-12;32!CL:0000192;7.75e-11;43!CL:0000134;1.50e-08;55!CL:0000048;1.11e-07;58!CL:0000723;3.02e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.46e-15,250;CL:0000192,8.32e-15,43;CL:0000514,8.32e-15,43;CL:0000222,8.82e-15,121;CL:0000359,7.92e-13,32;CL:0000680,1.02e-12,58;CL:0000056,1.02e-12,58;CL:0000355,1.02e-12,58;CL:0000187,2.25e-12,55;CL:0000393,2.01e-10,61;CL:0000211,2.01e-10,61;CL:0000057,1.66e-08,76 | |||
|ontology_enrichment_development_v019=CL:0000514;7.75e-11;43!CL:0000355;7.34e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.60e-17!659;UBERON:0003914!3.95e-16!118;UBERON:0005256!5.53e-16!143;UBERON:0002100!2.90e-14!216;UBERON:0002049!7.64e-14!79;UBERON:0007798!7.64e-14!79;UBERON:0001637!4.77e-13!42;UBERON:0003509!4.77e-13!42;UBERON:0004572!4.77e-13!42;UBERON:0000480!5.92e-13!626;UBERON:0000467!6.72e-13!625;UBERON:0001009!8.54e-13!113;UBERON:0004535!9.43e-13!110;UBERON:0000490!1.81e-12!138;UBERON:0004872!2.84e-12!84;UBERON:0000475!3.26e-12!365;UBERON:0000055!3.28e-12!69;UBERON:0000486!5.82e-12!82;UBERON:0000914!7.08e-12!83;UBERON:0002329!7.08e-12!83;UBERON:0003077!7.08e-12!83;UBERON:0003059!7.08e-12!83;UBERON:0007282!7.08e-12!83;UBERON:0009618!7.08e-12!83;UBERON:0007285!7.08e-12!83;UBERON:0001134!3.45e-11!61;UBERON:0002036!3.45e-11!61;UBERON:0003082!3.45e-11!61;UBERON:0004573!3.89e-11!33;UBERON:0004571!3.89e-11!33;UBERON:0001981!5.33e-11!60;UBERON:0007500!5.33e-11!60;UBERON:0004537!5.33e-11!60;UBERON:0006965!5.33e-11!60;UBERON:0004290!7.59e-11!70;UBERON:0000926!8.83e-11!448;UBERON:0004120!8.83e-11!448;UBERON:0006603!8.83e-11!448;UBERON:0002385!1.45e-10!63;UBERON:0001015!1.45e-10!63;UBERON:0000383!1.45e-10!63;UBERON:0003104!1.55e-10!238;UBERON:0009142!1.55e-10!238;UBERON:0000923!9.48e-10!604;UBERON:0005291!9.48e-10!604;UBERON:0006598!9.48e-10!604;UBERON:0002532!9.48e-10!604;UBERON:0002050!1.13e-09!605;UBERON:0005423!1.13e-09!605;UBERON:0000922!2.83e-09!612;UBERON:0000481!6.42e-09!347;UBERON:0000119!1.65e-08!312;UBERON:0009569!1.73e-08!113;UBERON:0000477!3.10e-08!286;UBERON:0000483!3.80e-08!309;UBERON:0004111!5.30e-07!241 | |ontology_enrichment_uberon=UBERON:0000468!6.60e-17!659;UBERON:0003914!3.95e-16!118;UBERON:0005256!5.53e-16!143;UBERON:0002100!2.90e-14!216;UBERON:0002049!7.64e-14!79;UBERON:0007798!7.64e-14!79;UBERON:0001637!4.77e-13!42;UBERON:0003509!4.77e-13!42;UBERON:0004572!4.77e-13!42;UBERON:0000480!5.92e-13!626;UBERON:0000467!6.72e-13!625;UBERON:0001009!8.54e-13!113;UBERON:0004535!9.43e-13!110;UBERON:0000490!1.81e-12!138;UBERON:0004872!2.84e-12!84;UBERON:0000475!3.26e-12!365;UBERON:0000055!3.28e-12!69;UBERON:0000486!5.82e-12!82;UBERON:0000914!7.08e-12!83;UBERON:0002329!7.08e-12!83;UBERON:0003077!7.08e-12!83;UBERON:0003059!7.08e-12!83;UBERON:0007282!7.08e-12!83;UBERON:0009618!7.08e-12!83;UBERON:0007285!7.08e-12!83;UBERON:0001134!3.45e-11!61;UBERON:0002036!3.45e-11!61;UBERON:0003082!3.45e-11!61;UBERON:0004573!3.89e-11!33;UBERON:0004571!3.89e-11!33;UBERON:0001981!5.33e-11!60;UBERON:0007500!5.33e-11!60;UBERON:0004537!5.33e-11!60;UBERON:0006965!5.33e-11!60;UBERON:0004290!7.59e-11!70;UBERON:0000926!8.83e-11!448;UBERON:0004120!8.83e-11!448;UBERON:0006603!8.83e-11!448;UBERON:0002385!1.45e-10!63;UBERON:0001015!1.45e-10!63;UBERON:0000383!1.45e-10!63;UBERON:0003104!1.55e-10!238;UBERON:0009142!1.55e-10!238;UBERON:0000923!9.48e-10!604;UBERON:0005291!9.48e-10!604;UBERON:0006598!9.48e-10!604;UBERON:0002532!9.48e-10!604;UBERON:0002050!1.13e-09!605;UBERON:0005423!1.13e-09!605;UBERON:0000922!2.83e-09!612;UBERON:0000481!6.42e-09!347;UBERON:0000119!1.65e-08!312;UBERON:0009569!1.73e-08!113;UBERON:0000477!3.10e-08!286;UBERON:0000483!3.80e-08!309;UBERON:0004111!5.30e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.10e-10;33!UBERON:0004571;4.10e-10;33!UBERON:0001637;2.20e-09;42!UBERON:0003509;2.20e-09;42!UBERON:0004572;2.20e-09;42!UBERON:0007500;3.00e-07;56!UBERON:0001981;3.00e-07;56!UBERON:0004537;3.00e-07;56!UBERON:0003914;3.83e-07;74 | |||
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| ||
|short_description=p1@YIPF3 | |short_description=p1@YIPF3 | ||
}} | }} |
Latest revision as of 22:31, 18 September 2015
Short description: | p1@YIPF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_YIPF3_5end |
Coexpression cluster: | C1147_Mesenchymal_Renal_Alveolar_Fibroblast_Placental_Pericytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000259737, ENST00000416380, ENST00000455768, ENST00000460547, ENST00000460903, ENST00000503972, ENST00000506469, ENST00000509315, uc003ovl.1, uc003ovm.1, uc010jyr.1, uc010jys.1, uc010jyt.1, uc011dvk.1_5end |
EntrezGene: | YIPF3 |
HGNC: | 21023 |
UniProt: | Q9GZM5D6RA04D6RBQ1D6RFI3E7EQR8D6RGI4Q5JTD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.46e-15 | 250 |
smooth muscle cell | 8.32e-15 | 43 |
smooth muscle myoblast | 8.32e-15 | 43 |
mesodermal cell | 8.82e-15 | 121 |
vascular associated smooth muscle cell | 7.92e-13 | 32 |
muscle precursor cell | 1.02e-12 | 58 |
myoblast | 1.02e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.02e-12 | 58 |
muscle cell | 2.25e-12 | 55 |
electrically responsive cell | 2.01e-10 | 61 |
electrically active cell | 2.01e-10 | 61 |
fibroblast | 1.66e-08 | 76 |