FFCP PHASE2:Hg19::chr3:52489503..52489540,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:11188 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18006 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=11188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18006 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9Y2I1,B4DMW1 | ||
|association_with_transcript=0bp_to_ENST00000345716,ENST00000433196,NM_007184,uc003ded.3_5end | |association_with_transcript=0bp_to_ENST00000345716,ENST00000433196,NM_007184,uc003ded.3_5end | ||
|cluster_id=chr3:52489503..52489540,+ | |cluster_id=chr3:52489503..52489540,+ | ||
Latest revision as of 23:59, 18 September 2015
| Short description: | p2@NISCH |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_NISCH_5end |
| Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
| Association with transcript: | 0bp_to_ENST00000345716, ENST00000433196, NM_007184, uc003ded.3_5end |
| EntrezGene: | NISCH |
| HGNC: | 18006 |
| UniProt: | Q9Y2I1B4DMW1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@NISCH |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 8.91e-30 | 114 |
| neural tube | 1.17e-25 | 56 |
| neural rod | 1.17e-25 | 56 |
| future spinal cord | 1.17e-25 | 56 |
| neural keel | 1.17e-25 | 56 |
| regional part of nervous system | 2.44e-24 | 53 |
| regional part of brain | 2.44e-24 | 53 |
| neural plate | 7.50e-21 | 82 |
| presumptive neural plate | 7.50e-21 | 82 |
| brain | 3.28e-20 | 68 |
Showing 1 to 10 of 36 entries
