FFCP PHASE1:Hg19::chr14:21271019..21271030,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=6035 | |EntrezGene=6035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=10044 | |HGNC=10044 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P07998 | |UniProt=P07998 | ||
|association_with_transcript=-5bp_to_,5bp_to_ENST00000340900,NM_002933,NM_198234,NM_198235,uc001vyg.2,uc001vyh.2,uc001vyi.2_5end | |association_with_transcript=-5bp_to_,5bp_to_ENST00000340900,NM_002933,NM_198234,NM_198235,uc001vyg.2,uc001vyh.2,uc001vyi.2_5end | ||
|cluster_id=chr14:21271019..21271030,- | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_3_at_RNASE1_5end | |description=CAGE_peak_3_at_RNASE1_5end | ||
Latest revision as of 00:39, 19 September 2015
| Short description: | p3@RNASE1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_RNASE1_5end |
| Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
| Association with transcript: | -5bp_to_, 5bp_to_ENST00000340900, NM_002933, NM_198234, NM_198235, uc001vyg.2, uc001vyh.2, uc001vyi.2_5end |
| EntrezGene: | RNASE1 |
| HGNC: | 10044 |
| UniProt: | P07998 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@RNASE1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell | 2.36e-26 | 36 |
| meso-epithelial cell | 6.12e-20 | 45 |
| endothelial cell of vascular tree | 1.38e-18 | 24 |
| blood vessel endothelial cell | 9.32e-15 | 18 |
| embryonic blood vessel endothelial progenitor cell | 9.32e-15 | 18 |
| lining cell | 1.38e-11 | 58 |
| barrier cell | 1.38e-11 | 58 |
| endothelial cell of artery | 8.75e-10 | 9 |
| macrophage | 6.32e-08 | 6 |
| vein endothelial cell | 1.74e-07 | 6 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.96e-60 | 114 |
| anatomical conduit | 2.10e-22 | 240 |
| tube | 2.24e-22 | 192 |
| neural tube | 2.71e-21 | 56 |
| neural rod | 2.71e-21 | 56 |
| future spinal cord | 2.71e-21 | 56 |
| neural keel | 2.71e-21 | 56 |
| regional part of nervous system | 1.40e-19 | 53 |
| regional part of brain | 1.40e-19 | 53 |
| regional part of forebrain | 1.04e-17 | 41 |
Showing 1 to 10 of 62 entries
