FFCP PHASE1:Hg19::chr18:21723132..21723143,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26256 | |EntrezGene=26256 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=15569 | |HGNC=15569 | ||
|TSSclassifier=strong | |||
|UniProt=E2ITD8,E2ITE0,E2ITE2 | |UniProt=E2ITD8,E2ITE0,E2ITE2 | ||
|association_with_transcript=53bp_to_HM594164,HM594165,HM594166,HM594168_5end | |association_with_transcript=53bp_to_HM594164,HM594165,HM594166,HM594168_5end | ||
|cluster_id=chr18:21723132..21723143,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_CABYR_5end | |description=CAGE_peak_4_at_CABYR_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;1.21e-40;1!CL:0000159;4.21e-21;2!CL:0000317;6.30e-21;2!CL:1000448;6.30e-21;2!CL:0002308;6.30e-21;2!CL:0002140;6.30e-21;2!CL:0000622;3.35e-09;5!CL:0000154;7.01e-08;6!CL:0002569;7.01e-08;6 | |ontology_enrichment_celltype_v019=CL:0000319;1.21e-40;1!CL:0000159;4.21e-21;2!CL:0000317;6.30e-21;2!CL:1000448;6.30e-21;2!CL:0002308;6.30e-21;2!CL:0002140;6.30e-21;2!CL:0000622;3.35e-09;5!CL:0000154;7.01e-08;6!CL:0002569;7.01e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,9.91e-41,1;CL:0000159,3.81e-21,2;CL:0000317,5.70e-21,2;CL:1000448,5.70e-21,2;CL:0002308,5.70e-21,2;CL:0002140,5.70e-21,2;CL:0000622,3.22e-09,5;CL:0000154,6.78e-08,6;CL:0002569,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.14e-17;10!UBERON:0005564;6.14e-17;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.14e-17;10!UBERON:0005564;6.14e-17;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;1.21e-40;1 | |ontology_enrichment_disease_v019=DOID:3030;1.21e-40;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,9.91e-41,1 | |||
|ontology_enrichment_uberon=UBERON:0000200!8.72e-09!6;UBERON:0003056!2.16e-08!61;UBERON:0000956!2.20e-08!25;UBERON:0000203!2.20e-08!25;UBERON:0001893!2.78e-08!34;UBERON:0003075!6.36e-08!86;UBERON:0007284!6.36e-08!86;UBERON:0001049!1.13e-07!57;UBERON:0005068!1.13e-07!57;UBERON:0006241!1.13e-07!57;UBERON:0007135!1.13e-07!57;UBERON:0002791!1.14e-07!33;UBERON:0002020!2.48e-07!34;UBERON:0003528!2.48e-07!34;UBERON:0002780!2.90e-07!41;UBERON:0001890!2.90e-07!41;UBERON:0006240!2.90e-07!41;UBERON:0002619!3.01e-07!22;UBERON:0002346!3.01e-07!90;UBERON:0004121!5.28e-07!169;UBERON:0003080!5.41e-07!42;UBERON:0001950!6.77e-07!20;UBERON:0001869!9.43e-07!32 | |ontology_enrichment_uberon=UBERON:0000200!8.72e-09!6;UBERON:0003056!2.16e-08!61;UBERON:0000956!2.20e-08!25;UBERON:0000203!2.20e-08!25;UBERON:0001893!2.78e-08!34;UBERON:0003075!6.36e-08!86;UBERON:0007284!6.36e-08!86;UBERON:0001049!1.13e-07!57;UBERON:0005068!1.13e-07!57;UBERON:0006241!1.13e-07!57;UBERON:0007135!1.13e-07!57;UBERON:0002791!1.14e-07!33;UBERON:0002020!2.48e-07!34;UBERON:0003528!2.48e-07!34;UBERON:0002780!2.90e-07!41;UBERON:0001890!2.90e-07!41;UBERON:0006240!2.90e-07!41;UBERON:0002619!3.01e-07!22;UBERON:0002346!3.01e-07!90;UBERON:0004121!5.28e-07!169;UBERON:0003080!5.41e-07!42;UBERON:0001950!6.77e-07!20;UBERON:0001869!9.43e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;6.30e-21;2!UBERON:0007771;6.30e-21;2!UBERON:0003297;6.30e-21;2!UBERON:0001821;6.30e-21;2!UBERON:0003487;6.30e-21;2!UBERON:0001820;6.30e-21;2!UBERON:0000473;6.99e-21;8!UBERON:0003135;1.68e-15;11!UBERON:0000991;1.29e-08;21!UBERON:0003101;2.88e-08;22!UBERON:0000079;2.88e-08;22!UBERON:0003422;7.01e-08;6!UBERON:0003104;6.21e-07;7!UBERON:0009142;6.21e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002419;6.30e-21;2!UBERON:0007771;6.30e-21;2!UBERON:0003297;6.30e-21;2!UBERON:0001821;6.30e-21;2!UBERON:0003487;6.30e-21;2!UBERON:0001820;6.30e-21;2!UBERON:0000473;6.99e-21;8!UBERON:0003135;1.68e-15;11!UBERON:0000991;1.29e-08;21!UBERON:0003101;2.88e-08;22!UBERON:0000079;2.88e-08;22!UBERON:0003422;7.01e-08;6!UBERON:0003104;6.21e-07;7!UBERON:0009142;6.21e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.70e-21,2;UBERON:0007771,5.70e-21,2;UBERON:0003297,5.70e-21,2;UBERON:0001821,5.70e-21,2;UBERON:0003487,5.70e-21,2;UBERON:0001820,5.70e-21,2;UBERON:0005089,5.70e-21,2;UBERON:0005088,5.70e-21,2;UBERON:0000473,7.35e-21,8;UBERON:0003135,1.74e-15,11;UBERON:0000991,1.32e-08,21;UBERON:0009196,1.32e-08,21;UBERON:0009117,1.32e-08,21;UBERON:0005564,1.32e-08,21;UBERON:0004176,2.93e-08,22;UBERON:0003101,2.93e-08,22;UBERON:0000079,2.93e-08,22;UBERON:0003422,7.25e-08,6 | |||
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| ||
|short_description=p4@CABYR | |short_description=p4@CABYR | ||
}} | }} |
Latest revision as of 00:46, 19 September 2015
Short description: | p4@CABYR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CABYR_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 53bp_to_HM594164, HM594165, HM594166, HM594168_5end |
EntrezGene: | CABYR |
HGNC: | 15569 |
UniProt: | E2ITD8E2ITE0E2ITE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 9.91e-41 | 1 |
seromucus secreting cell | 3.81e-21 | 2 |
sebum secreting cell | 5.70e-21 | 2 |
epithelial cell of sweat gland | 5.70e-21 | 2 |
epithelial cell of skin gland | 5.70e-21 | 2 |
acinar cell of sebaceous gland | 5.70e-21 | 2 |
acinar cell | 3.22e-09 | 5 |
protein secreting cell | 6.78e-08 | 6 |
mesenchymal stem cell of umbilical cord | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.70e-21 | 2 |
epidermis gland | 5.70e-21 | 2 |
gland of integumental system | 5.70e-21 | 2 |
sebaceous gland | 5.70e-21 | 2 |
skin sebaceous gland | 5.70e-21 | 2 |
sweat gland | 5.70e-21 | 2 |
sweat gland placode | 5.70e-21 | 2 |
sebaceous gland placode | 5.70e-21 | 2 |
testis | 7.35e-21 | 8 |
male reproductive organ | 1.74e-15 | 11 |
gonad | 1.32e-08 | 21 |
indifferent external genitalia | 1.32e-08 | 21 |
indifferent gonad | 1.32e-08 | 21 |
gonad primordium | 1.32e-08 | 21 |
external genitalia | 2.93e-08 | 22 |
male organism | 2.93e-08 | 22 |
male reproductive system | 2.93e-08 | 22 |
mesenchyme of umbilical cord | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 9.91e-41 | 1 |