FFCP PHASE1:Hg19::chr3:55515049..55515072,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:55515049..55515072,-
|short_description=p6@WNT5A
|description=CAGE_peak_6_at_WNT5A_5end
|association_with_transcript=-88bp_to_uc003dhm.2_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7474 | |EntrezGene=7474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12784 | |HGNC=12784 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-88bp_to_uc003dhm.2_5end | |||
|cluster_id=chr3:55515049..55515072,- | |||
|coexpression_cluster_id=C4338 | |||
|description=CAGE_peak_6_at_WNT5A_5end | |||
|id=chr3:55515049..55515072,- | |||
|ontology_enrichment_celltype=CL:0000055!2.03e-23!180;CL:0000057!4.95e-16!75;CL:0002620!9.68e-14!23;CL:0000548!5.03e-12!679;CL:0000004!5.03e-12!679;CL:0000255!5.03e-12!679;CL:0000012!1.13e-11!682;CL:0000144!1.06e-10!625;CL:0002371!1.10e-09!591;CL:0000048!1.32e-09!430;CL:0000723!3.29e-09!436;CL:0000034!2.40e-08!444;CL:0000499!1.47e-07!27;CL:0000003!2.28e-07!722;CL:0000680!5.67e-07!57;CL:0000056!5.67e-07!57;CL:0000355!5.67e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.11e-15;23!CL:0000134;1.28e-11;55!CL:0000723;2.35e-10;61!CL:0000048;3.10e-10;58!CL:0000034;7.28e-08;69!CL:0000138;5.14e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.80e-15,23;CL:0000057,2.68e-11,76;CL:0000048,4.76e-07,427;CL:0000058,4.91e-07,6;CL:0000138,4.91e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.59e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.17e-12;14!DOID:17;1.36e-08;5!DOID:450;1.36e-08;5!DOID:66;1.36e-08;5!DOID:423;1.36e-08;5!DOID:0080000;1.36e-08;5!DOID:11722;1.36e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.15e-12,14;DOID:17,1.32e-08,5;DOID:450,1.32e-08,5;DOID:66,1.32e-08,5;DOID:423,1.32e-08,5;DOID:0080000,1.32e-08,5;DOID:11722,1.32e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!4.06e-10!45;UBERON:0002416!4.06e-10!45;UBERON:0000914!5.52e-10!83;UBERON:0002329!5.52e-10!83;UBERON:0003077!5.52e-10!83;UBERON:0003059!5.52e-10!83;UBERON:0007282!5.52e-10!83;UBERON:0009618!5.52e-10!83;UBERON:0007285!5.52e-10!83;UBERON:0002097!1.95e-09!40;UBERON:0005631!5.28e-09!14;UBERON:0000158!5.28e-09!14;UBERON:0003102!6.59e-09!95;UBERON:0001737!1.20e-08!9;UBERON:0004290!8.81e-08!70;UBERON:0000486!2.65e-07!82;UBERON:0000478!6.10e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.10e-12;9!UBERON:0001557;4.10e-12;9!UBERON:0002097;7.61e-10;41!UBERON:0002199;6.59e-09;46!UBERON:0002416;6.59e-09;46!UBERON:0003102;6.79e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.24e-14,46;UBERON:0002416,2.24e-14,46;UBERON:0002097,5.08e-13,41;UBERON:0001737,3.82e-12,9;UBERON:0005631,3.24e-08,14;UBERON:0000158,3.24e-08,14;UBERON:0003102,3.84e-08,99 | |||
|phase1_expression=1.45342703416445,0.428201047781966,0,0,0,4.36169262050184,0,1.26343974685366,0,0,0,5.67947567538448,6.06664049925443,0.247532705920093,0,0,0,0,0,1.10808952269109,1.22400414746552,1.25381888591235,0,0.684372125364421,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5053543908412,81.2167415230141,10.2841028462185,21.4727205703797,5.83961844363163,1.32348744029695,5.09977614163897,5.44575671297381,0.0654895377488563,0,0,0,1.0447784237956,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0.468642863667593,1.5608003841516,0.570471821544449,2.09228152772521,0.23486899728753,0,0.140450806702248,2.24569588380383,0.122834317311768,0.516628905878827,36.8280885757437,24.7266929278557,1.82032272387605,0,0.505008341862199,0.375355559615893,6.64953877162039,0.877955241761676,9.19463387397059,16.0754723030059,0.226864366320042,10.5839885056429,21.1421814930382,26.7034195461048,9.90300617078528,15.6639844442427,7.47157566132325,8.37525853492154,1.68776332241266,0.194874010322397,11.6119536152293,21.6317261809403,5.81925804547723,7.81021103536552,3.42557133973977,4.0694542154517,0,0.545492241181669,0,0,0,0,0,0,0,32.8544017892614,5.14592750554308,0,5.10804720835177,5.77503585335668,6.03364680203204,5.90046415273356,9.15841913557232,6.17646247301406,6.31850387867978,6.40630671599961,5.25842101824641,5.88664395376038,3.46272441251751,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0,3.08822058537346,0,0,0,0.185176890317059,0,0,1.44331342025273,1.04337364477569,4.22671299248958,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0.144119953416961,0,1.0159663086747,0,0,0,0.616964956219941,0,0,0.112131084345361,0,0.66004457238855,1.42198887333556,0,7.607724773004,23.1366161428837,6.24044621468197,1.80045161983499,0,1.5985330740966,1.00084595560703,0,1.64648067356154,8.14340460734338,0.710783897485092,0.791951872933429,25.9237864271244,16.5591357134056,20.5944361835038,0,0,0,0,0,0,6.80472141337622,4.10952645100767,9.13210912523467,0,0,0,0,3.04913549066956,0,0,0,0,0,0,0,0,0,0.813795071099207,15.8057854763413,44.2503892216961,11.985383542579,23.1940001685572,2.10662269809403,0,2.0694614258501,7.97070718242524,5.7154442247928,3.5622281931914,0,0.343143423810856,0,0,0,0.909382714338778,1.66435439510497,1.5119514666484,0,0.460385919864187,0,0,0,0.160853921143607,0,6.16838775210622,3.37367278094941,5.09188367285617,9.8658341544888,3.95115286763861,0,0,0,0.918515585316854,1.63882051206045,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,1.35473218771926,1.00337954770971,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,6.89118645595407,0,0,4.8335359146061,0.770243085573222,0.614014698904518,3.72158745708233,0.644521469209642,1.30515024522806,1.87498580315422,0.445160178233687,0,0,0,0,0.464845549297286,1.5740617341532,2.0911118104818,0,0.532306030317022,0.869932992075073,1.11194531462352,0.143124886741991,0,0.632758849437452,0.953150969619124,0.511795582622668,0,0,0,0,0,0.471249609382746,1.01091240786658,0,0.421258456238981,0,4.38684281336312,0,2.8664981395677,0.989838023675989,0,0,0.66343897524122,0,0.578775534266688,0,5.2756698010303,0.30982349809975,0.281695602532241,1.14729081763241,0.88424136911809,3.21003946333125,0,0.633322905892992,0.658589785919804,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.71623345421307,4.75143489332222,0.921482106297696,0.994147647766298,0,0.222617410045812,0,0,0,0,0,0,0,2.48831670129446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,32.3595438605483,0,0,0,4.14701507651495,21.8002272296432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,1.12222348352147,0,5.39485945871752,0,0,0.343189995723929,0,0,0,0.407712618220842,0,3.97793048781655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8237578953317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,3.73137007217185,0.934853239388898,1.10961172300523,25.0011966963118,4.77979013329893,15.1267907671411,0.457680136793847,0.151230923763239,0,0.591420599958536,7.48694805669401,28.3375960663071,4.34736279253526,0.829412415681711,2.65841714557995,122.088344463946,7.96365327685258,15.6130136989206,8.13741466409323,15.275287373015,18.3672052542655,0,103.50493106164,0.800055529326307,0.343395705182793,0.673498977531838,0,0,2.57329909649911,0.260994291965212,4.98753036126999,0,0.244736704506468,1.25362188757041,0.617602894321944,1.53498834705095,0,0.1929140382709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| ||
|short_description=p6@WNT5A | |||
}} | }} |
Latest revision as of 02:54, 19 September 2015
Short description: | p6@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WNT5A_5end |
Coexpression cluster: | C4338_mesenchymal_Chondrocyte_Olfactory_Fibroblast_Hair_cholangiocellular_Mesenchymal |
Association with transcript: | -88bp_to_uc003dhm.2_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.80e-15 | 23 |
fibroblast | 2.68e-11 | 76 |
multi fate stem cell | 4.76e-07 | 427 |
chondroblast | 4.91e-07 | 6 |
chondrocyte | 4.91e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
integument | 2.24e-14 | 46 |
integumental system | 2.24e-14 | 46 |
skin of body | 5.08e-13 | 41 |
larynx | 3.82e-12 | 9 |
extraembryonic membrane | 3.24e-08 | 14 |
membranous layer | 3.24e-08 | 14 |
surface structure | 3.84e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.15e-12 | 14 |
musculoskeletal system disease | 1.32e-08 | 5 |
myotonic disease | 1.32e-08 | 5 |
muscle tissue disease | 1.32e-08 | 5 |
myopathy | 1.32e-08 | 5 |
muscular disease | 1.32e-08 | 5 |
myotonic dystrophy | 1.32e-08 | 5 |