FFCP PHASE1:Hg19::chr3:55521323..55521342,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7474 | |EntrezGene=7474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12784 | |HGNC=12784 | ||
|TSSclassifier=strong | |||
|UniProt=P41221 | |UniProt=P41221 | ||
|association_with_transcript=0bp_to_ENST00000264634,NM_003392,uc003dhn.2,uc010hmx.2_5end | |association_with_transcript=0bp_to_ENST00000264634,NM_003392,uc003dhn.2,uc010hmx.2_5end | ||
|cluster_id=chr3:55521323..55521342,- | |||
|coexpression_cluster_id=C1080 | |||
|description=CAGE_peak_5_at_WNT5A_5end | |description=CAGE_peak_5_at_WNT5A_5end | ||
|id=chr3:55521323..55521342,- | |id=chr3:55521323..55521342,- | ||
|ontology_enrichment_celltype=CL:0000055!6.20e-21!180;CL:0000057!4.86e-14!75;CL:0002620!1.28e-08!23 | |ontology_enrichment_celltype=CL:0000055!6.20e-21!180;CL:0000057!4.86e-14!75;CL:0002620!1.28e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.72e-10;23!CL:0000134;8.85e-09;55!CL:0000349;2.11e-07;19!CL:0000048;3.62e-07;58!CL:0000723;5.11e-07;61!CL:0002320;9.61e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.43e-15,76;CL:0002620,3.70e-10,23;CL:0000349,2.98e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;6.86e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.98e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.08e-11!95;UBERON:0000914!3.32e-09!83;UBERON:0002329!3.32e-09!83;UBERON:0003077!3.32e-09!83;UBERON:0003059!3.32e-09!83;UBERON:0007282!3.32e-09!83;UBERON:0009618!3.32e-09!83;UBERON:0007285!3.32e-09!83;UBERON:0002199!1.01e-08!45;UBERON:0002416!1.01e-08!45;UBERON:0004923!1.73e-08!57;UBERON:0000468!1.87e-08!659;UBERON:0000475!2.16e-08!365;UBERON:0002097!2.60e-08!40;UBERON:0000486!4.74e-08!82;UBERON:0000467!2.52e-07!625;UBERON:0000480!2.57e-07!626;UBERON:0004290!3.12e-07!70;UBERON:0005631!4.79e-07!14;UBERON:0000158!4.79e-07!14 | |ontology_enrichment_uberon=UBERON:0003102!2.08e-11!95;UBERON:0000914!3.32e-09!83;UBERON:0002329!3.32e-09!83;UBERON:0003077!3.32e-09!83;UBERON:0003059!3.32e-09!83;UBERON:0007282!3.32e-09!83;UBERON:0009618!3.32e-09!83;UBERON:0007285!3.32e-09!83;UBERON:0002199!1.01e-08!45;UBERON:0002416!1.01e-08!45;UBERON:0004923!1.73e-08!57;UBERON:0000468!1.87e-08!659;UBERON:0000475!2.16e-08!365;UBERON:0002097!2.60e-08!40;UBERON:0000486!4.74e-08!82;UBERON:0000467!2.52e-07!625;UBERON:0000480!2.57e-07!626;UBERON:0004290!3.12e-07!70;UBERON:0005631!4.79e-07!14;UBERON:0000158!4.79e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.21e-08;24!UBERON:0002097;9.96e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.39e-12,99;UBERON:0002199,1.85e-10,46;UBERON:0002416,1.85e-10,46;UBERON:0002097,5.12e-10,41;UBERON:0004923,3.31e-09,66;UBERON:0000486,1.20e-08,83;UBERON:0005631,2.49e-08,14;UBERON:0000158,2.49e-08,14;UBERON:0000478,5.17e-08,24;UBERON:0002329,9.67e-08,71;UBERON:0003059,9.67e-08,71;UBERON:0007282,9.67e-08,71;UBERON:0004290,9.67e-08,71;UBERON:0009618,9.67e-08,71;UBERON:0007524,1.12e-07,73;UBERON:0003077,1.95e-07,72;UBERON:0007285,1.95e-07,72 | |||
|phase1_expression=3.45188920614058,1.92690471501885,1.9733616573436,4.00293193412522,4.91657203870017,4.36169262050184,0,4.42203911398782,0.261185628199839,0.737201809504527,0,9.39297900159741,6.59417445571134,0.74259811776028,1.98838425436749,4.03395087871065,4.21886169616784,5.11217063271161,9.27072317701963,2.70866327768933,3.06001036866379,1.56727360739044,1.14494394852423,1.50561867580173,1.00434111675842,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0,0,1.27952309238679,0,0,0,0,1.11957737119962,0,0,0.145398238779565,1.13362783106643,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0,0,0.564727018627814,1.09162460023138,1.34834090667051,0.306083892370903,1.60464513538047,0.639337125799041,0,0.199463657621632,0,1.7412554317715,17.0215567407342,7.4738669879469,0,0,0,1.81619850790011,4.78760926783834,3.48108626184973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,17.3490793144592,13.0347856765331,10.5737958841401,11.9292892057665,7.29952305453954,1.32348744029695,0.886917589850256,2.45937399940753,0.982343066232845,0.364295288292542,0,3.57002133020152,4.70150290708022,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.506522046658319,3.97227542439656,2.29469296599051,2.12801029319014,0,0,1.2333377420858,0.311211035399766,1.75123873690594,0.653847612453835,2.4217188423189,1.72852777344,0.937285727335186,2.18512053781224,1.1409436430889,1.79338416662161,1.52664848236894,1.45685649931318,1.40450806702248,3.0623125688234,0.737005903870608,4.85631171526098,43.956105719436,42.7771787651903,3.64064544775211,2.15585442544872,1.34668891163253,1.12606667884768,6.92660288710457,9.2185300384976,14.4049264025539,36.507848314303,0.226864366320042,15.2481190335533,20.715066715401,10.172731255659,12.3037349394605,12.0571459208974,11.5938243020533,7.63079110959518,4.55696097051419,1.75386609290158,9.59248342127635,13.8995346949872,3.55621325001386,15.620422070731,4.23158812556089,3.56077243852024,2.12586938479627,2.45471508531751,1.72082757233402,0.121973706129595,0,0.232387885739037,0.621966330092223,0.252320850875628,0.72995471815166,23.4674298494724,7.07565032012174,9.66944449467364,7.89425477654364,7.21879481669586,1.8929088006375,3.87744787179634,1.68707720918437,1.7647035637183,2.83243277320128,2.60997681022206,1.61797569792197,3.33576490713088,1.53898862778556,0.738155454624648,4.20725321410337,2.057870056657,1.47008711385542,0,0.982827216677626,0,0,0.491953754172454,1.02940686179115,0.548751427043128,0,0.402115889646523,0.277765335475589,1.3032332212413,3.11980435583874,1.44331342025273,1.39116485970092,2.11335649624479,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,4.70349958956807,3.1190521393325,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0.380987365753014,0,0,0,0.719792448923265,0,0,0.784917590417525,6.10344096366592,1.0267360014933,4.13669490424889,10.7296933755565,4.22651376278,9.83971031364021,16.6411899058186,0.514414748524284,0,2.66422179016099,2.43062589218851,4.88359444852299,0,3.58309802723109,2.84313558994037,0,9.34462068884717,0.871533458600294,7.29802835629016,0,0,0,2.15662369942424,1.14861935834114,9.98458335285029,5.06734573336527,4.9314317412092,8.77398719875488,0,0,0,0,0,0,1.54657762555539,0.670065061337395,0,0,0,0,0.858840442033979,1.00034104211935,0.542530047399471,7.90289273817067,7.13715955188647,7.254311091561,5.15422225967938,0.902838299183157,2.27407504055985,4.1389228517002,3.32112799267718,4.97796755062599,3.30157734978715,0.195801157462741,0.343143423810856,0,0,0,3.94065842880137,11.6504807657348,6.35019615992329,3.2254015016441,2.30192959932094,2.80660094433074,2.56278298511402,4.60536524160033,8.36440389946759,1.48418066444991,6.9394362211195,9.05564799096948,4.92762936082855,10.904343012856,5.57809816607804,0.120859449591622,1.40354529212299,0.828728900423067,2.98517565227978,2.00300284807389,3.67148361886388,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.170093705276516,1.0795795805107,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,1.02580050046556,0.328014645699706,0.325378394664303,2.47298427954533,5.03632056500889,5.77566499444116,4.01985876597321,2.60024098414608,0,4.35018232314549,0.154048617114644,1.07452572308291,2.61889487720608,1.6113036730241,0.580066775656914,2.81247870473133,1.60257664164127,0.661139661443912,0.576570202095319,0.382838137483752,1.0115778085555,0.464845549297286,26.7590494806044,2.0911118104818,0,2.66153015158511,5.21959795245044,6.85699610684504,1.14499909393593,0,0.632758849437452,3.0500831027812,1.27948895655667,1.71175595213568,3.5002357271853,1.56989728039846,1.97859703341646,3.29444435683266,2.12062324222236,0.808729926293264,0,2.94880919367287,0.975267478179181,1.46228093778771,2.11300293513511,5.45999645631943,4.10075752665767,0,1.65409603063837,0,2.19225442626881,0,0,2.84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|phase1_expression=3.45188920614058,1.92690471501885,1.9733616573436,4.00293193412522,4.91657203870017,4.36169262050184,0,4.42203911398782,0.261185628199839,0.737201809504527,0,9.39297900159741,6.59417445571134,0.74259811776028,1.98838425436749,4.03395087871065,4.21886169616784,5.11217063271161,9.27072317701963,2.70866327768933,3.06001036866379,1.56727360739044,1.14494394852423,1.50561867580173,1.00434111675842,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0,0,1.27952309238679,0,0,0,0,1.11957737119962,0,0,0.145398238779565,1.13362783106643,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0,0,0.564727018627814,1.09162460023138,1.34834090667051,0.306083892370903,1.60464513538047,0.639337125799041,0,0.199463657621632,0,1.7412554317715,17.0215567407342,7.4738669879469,0,0,0,1.81619850790011,4.78760926783834,3.48108626184973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,17.3490793144592,13.0347856765331,10.5737958841401,11.9292892057665,7.29952305453954,1.32348744029695,0.886917589850256,2.45937399940753,0.982343066232845,0.364295288292542,0,3.57002133020152,4.70150290708022,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.506522046658319,3.97227542439656,2.29469296599051,2.12801029319014,0,0,1.2333377420858,0.311211035399766,1.75123873690594,0.653847612453835,2.4217188423189,1.72852777344,0.937285727335186,2.18512053781224,1.1409436430889,1.79338416662161,1.52664848236894,1.45685649931318,1.40450806702248,3.0623125688234,0.737005903870608,4.85631171526098,43.956105719436,42.7771787651903,3.64064544775211,2.15585442544872,1.34668891163253,1.12606667884768,6.92660288710457,9.2185300384976,14.4049264025539,36.507848314303,0.226864366320042,15.2481190335533,20.715066715401,10.172731255659,12.3037349394605,12.0571459208974,11.5938243020533,7.63079110959518,4.55696097051419,1.75386609290158,9.59248342127635,13.8995346949872,3.55621325001386,15.620422070731,4.23158812556089,3.56077243852024,2.12586938479627,2.45471508531751,1.72082757233402,0.121973706129595,0,0.232387885739037,0.621966330092223,0.252320850875628,0.72995471815166,23.4674298494724,7.07565032012174,9.66944449467364,7.89425477654364,7.21879481669586,1.8929088006375,3.87744787179634,1.68707720918437,1.7647035637183,2.83243277320128,2.60997681022206,1.61797569792197,3.33576490713088,1.53898862778556,0.738155454624648,4.20725321410337,2.057870056657,1.47008711385542,0,0.982827216677626,0,0,0.491953754172454,1.02940686179115,0.548751427043128,0,0.402115889646523,0.277765335475589,1.3032332212413,3.11980435583874,1.44331342025273,1.39116485970092,2.11335649624479,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,4.70349958956807,3.1190521393325,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0.380987365753014,0,0,0,0.719792448923265,0,0,0.784917590417525,6.10344096366592,1.0267360014933,4.13669490424889,10.7296933755565,4.22651376278,9.83971031364021,16.6411899058186,0.514414748524284,0,2.66422179016099,2.43062589218851,4.88359444852299,0,3.58309802723109,2.84313558994037,0,9.34462068884717,0.871533458600294,7.29802835629016,0,0,0,2.15662369942424,1.14861935834114,9.98458335285029,5.06734573336527,4.9314317412092,8.77398719875488,0,0,0,0,0,0,1.54657762555539,0.670065061337395,0,0,0,0,0.858840442033979,1.00034104211935,0.542530047399471,7.90289273817067,7.13715955188647,7.254311091561,5.15422225967938,0.902838299183157,2.27407504055985,4.1389228517002,3.32112799267718,4.97796755062599,3.30157734978715,0.195801157462741,0.343143423810856,0,0,0,3.94065842880137,11.6504807657348,6.35019615992329,3.2254015016441,2.30192959932094,2.80660094433074,2.56278298511402,4.60536524160033,8.36440389946759,1.48418066444991,6.9394362211195,9.05564799096948,4.92762936082855,10.904343012856,5.57809816607804,0.120859449591622,1.40354529212299,0.828728900423067,2.98517565227978,2.00300284807389,3.67148361886388,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.170093705276516,1.0795795805107,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,1.02580050046556,0.328014645699706,0.325378394664303,2.47298427954533,5.03632056500889,5.77566499444116,4.01985876597321,2.60024098414608,0,4.35018232314549,0.154048617114644,1.07452572308291,2.61889487720608,1.6113036730241,0.580066775656914,2.81247870473133,1.60257664164127,0.661139661443912,0.576570202095319,0.382838137483752,1.0115778085555,0.464845549297286,26.7590494806044,2.0911118104818,0,2.66153015158511,5.21959795245044,6.85699610684504,1.14499909393593,0,0.632758849437452,3.0500831027812,1.27948895655667,1.71175595213568,3.5002357271853,1.56989728039846,1.97859703341646,3.29444435683266,2.12062324222236,0.808729926293264,0,2.94880919367287,0.975267478179181,1.46228093778771,2.11300293513511,5.45999645631943,4.10075752665767,0,1.65409603063837,0,2.19225442626881,0,0,2.84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| ||
|short_description=p5@WNT5A | |short_description=p5@WNT5A | ||
}} | }} |
Latest revision as of 03:06, 19 September 2015
Short description: | p5@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WNT5A_5end |
Coexpression cluster: | C1080_Fibroblast_mesenchymal_neuroectodermal_Hair_Mesenchymal_Smooth_alveolar |
Association with transcript: | 0bp_to_ENST00000264634, NM_003392, uc003dhn.2, uc010hmx.2_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | P41221 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.43e-15 | 76 |
skin fibroblast | 3.70e-10 | 23 |
extraembryonic cell | 2.98e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.39e-12 | 99 |
integument | 1.85e-10 | 46 |
integumental system | 1.85e-10 | 46 |
skin of body | 5.12e-10 | 41 |
organ component layer | 3.31e-09 | 66 |
multilaminar epithelium | 1.20e-08 | 83 |
extraembryonic membrane | 2.49e-08 | 14 |
membranous layer | 2.49e-08 | 14 |
extraembryonic structure | 5.17e-08 | 24 |
somite | 9.67e-08 | 71 |
presomitic mesoderm | 9.67e-08 | 71 |
presumptive segmental plate | 9.67e-08 | 71 |
dermomyotome | 9.67e-08 | 71 |
trunk paraxial mesoderm | 9.67e-08 | 71 |
dense mesenchyme tissue | 1.12e-07 | 73 |
paraxial mesoderm | 1.95e-07 | 72 |
presumptive paraxial mesoderm | 1.95e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.98e-07 | 14 |