FFCP PHASE1:Hg19::chr15:75498355..75498379,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56905 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24497 | |||
|TSSclassifier=strong | |||
|UniProt=F8WBD1 | |||
|association_with_transcript=-155bp_to_ENST00000446981_5end | |||
|cluster_id=chr15:75498355..75498379,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_4_at_C15orf39_5end | |||
|id=chr15:75498355..75498379,+ | |||
|ontology_enrichment_celltype=CL:0000860!8.26e-27!45;CL:0002057!3.36e-26!42;CL:0000763!4.89e-26!112;CL:0000049!4.89e-26!112;CL:0000766!1.42e-25!76;CL:0000557!6.83e-21!71;CL:0002009!1.30e-20!65;CL:0000037!1.32e-20!172;CL:0000566!1.32e-20!172;CL:0002194!1.30e-19!63;CL:0000576!1.30e-19!63;CL:0000040!1.30e-19!63;CL:0000559!1.30e-19!63;CL:0000839!1.69e-19!70;CL:0000738!1.74e-19!140;CL:0000988!3.89e-19!182;CL:0002032!8.38e-19!165;CL:0000837!8.38e-19!165;CL:0002031!9.09e-13!124;CL:0002087!1.03e-12!119;CL:0000063!1.08e-07!578;CL:0000134!8.53e-07!358;CL:0002320!9.03e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.81e-37;33!CL:0002057;1.81e-37;33!CL:0000473;8.04e-28;39!CL:0000234;8.04e-28;39!CL:0000576;3.65e-25;48!CL:0000766;8.75e-20;69!CL:0000763;1.02e-14;100!CL:0000094;5.07e-11;8!CL:0002087;2.79e-09;104!CL:0000738;8.81e-08;136!CL:0000081;2.06e-07;11!CL:0002393;2.53e-07;6!CL:0002397;2.53e-07;6!CL:0000988;3.91e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.40e-47,42;CL:0002057,1.40e-47,42;CL:0000473,1.33e-43,48;CL:0000234,1.33e-43,48;CL:0000763,3.00e-42,108;CL:0000049,3.00e-42,108;CL:0000766,2.43e-41,72;CL:0002009,1.14e-36,61;CL:0002194,9.98e-35,59;CL:0000576,9.98e-35,59;CL:0000040,9.98e-35,59;CL:0000559,9.98e-35,59;CL:0000037,2.79e-34,168;CL:0000557,1.84e-33,67;CL:0002032,2.06e-32,161;CL:0000837,2.06e-32,161;CL:0000988,6.48e-32,177;CL:0000839,7.25e-31,66;CL:0000738,2.97e-30,136;CL:0002087,4.39e-24,115;CL:0002031,4.09e-22,120;CL:0000094,3.51e-11,8;CL:0000134,5.14e-11,354;CL:0002320,2.80e-10,361;CL:0000219,3.41e-09,386;CL:0002393,7.44e-08,9;CL:0002397,7.44e-08,9;CL:0000081,1.60e-07,11;CL:0000048,7.81e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.02e-34;42!CL:0000049;8.77e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-21!102;UBERON:0003061!1.49e-21!102;UBERON:0002193!4.65e-19!112;UBERON:0002371!7.38e-18!80;UBERON:0001474!3.22e-17!86;UBERON:0002405!2.22e-14!115;UBERON:0004765!7.01e-12!101;UBERON:0001434!7.01e-12!101;UBERON:0003081!2.36e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.27e-08;15!UBERON:0000179;1.27e-08;15!UBERON:0000463;1.27e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.89e-32,98;UBERON:0003061,1.89e-32,98;UBERON:0002371,4.96e-29,76;UBERON:0002193,1.18e-28,108;UBERON:0001474,1.21e-25,82;UBERON:0004765,7.29e-22,90;UBERON:0002405,1.14e-21,93;UBERON:0001434,4.84e-18,100;UBERON:0003081,8.58e-16,203;UBERON:0002384,2.71e-09,371;UBERON:0000178,2.39e-08,15;UBERON:0000179,2.39e-08,15;UBERON:0000463,2.39e-08,15;UBERON:0002204,3.07e-08,167 | |||
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| |||
|short_description=p4@C15orf39 | |||
}} |
Latest revision as of 03:28, 19 September 2015
Short description: | p4@C15orf39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C15orf39_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -155bp_to_ENST00000446981_5end |
EntrezGene: | C15orf39 |
HGNC: | 24497 |
UniProt: | F8WBD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.40e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.40e-47 | 42 |
defensive cell | 1.33e-43 | 48 |
phagocyte | 1.33e-43 | 48 |
myeloid cell | 3.00e-42 | 108 |
common myeloid progenitor | 3.00e-42 | 108 |
myeloid leukocyte | 2.43e-41 | 72 |
macrophage dendritic cell progenitor | 1.14e-36 | 61 |
monopoietic cell | 9.98e-35 | 59 |
monocyte | 9.98e-35 | 59 |
monoblast | 9.98e-35 | 59 |
promonocyte | 9.98e-35 | 59 |
hematopoietic stem cell | 2.79e-34 | 168 |
granulocyte monocyte progenitor cell | 1.84e-33 | 67 |
hematopoietic oligopotent progenitor cell | 2.06e-32 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-32 | 161 |
hematopoietic cell | 6.48e-32 | 177 |
myeloid lineage restricted progenitor cell | 7.25e-31 | 66 |
leukocyte | 2.97e-30 | 136 |
nongranular leukocyte | 4.39e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 4.09e-22 | 120 |
granulocyte | 3.51e-11 | 8 |
mesenchymal cell | 5.14e-11 | 354 |
connective tissue cell | 2.80e-10 | 361 |
motile cell | 3.41e-09 | 386 |
intermediate monocyte | 7.44e-08 | 9 |
CD14-positive, CD16-positive monocyte | 7.44e-08 | 9 |
blood cell | 1.60e-07 | 11 |
multi fate stem cell | 7.81e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.89e-32 | 98 |
blood island | 1.89e-32 | 98 |
bone marrow | 4.96e-29 | 76 |
hemolymphoid system | 1.18e-28 | 108 |
bone element | 1.21e-25 | 82 |
skeletal element | 7.29e-22 | 90 |
immune system | 1.14e-21 | 93 |
skeletal system | 4.84e-18 | 100 |
lateral plate mesoderm | 8.58e-16 | 203 |
connective tissue | 2.71e-09 | 371 |
blood | 2.39e-08 | 15 |
haemolymphatic fluid | 2.39e-08 | 15 |
organism substance | 2.39e-08 | 15 |
musculoskeletal system | 3.07e-08 | 167 |