FFCP PHASE1:Hg19::chr1:183604930..183604943,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:183604930..183604943,-
|short_description=p3@ARPC5
|description=CAGE_peak_3_at_ARPC5_5end
|association_with_transcript=-38bp_to_ENST00000294742_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10092 | |EntrezGene=10092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=708 | |HGNC=708 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-38bp_to_ENST00000294742_5end | |||
|cluster_id=chr1:183604930..183604943,- | |||
|description=CAGE_peak_3_at_ARPC5_5end | |||
|id=chr1:183604930..183604943,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.93e-07;33!CL:0002057;9.93e-07;33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.99e-10!511;UBERON:0002050!1.90e-09!605;UBERON:0005423!1.90e-09!605;UBERON:0000923!3.76e-09!604;UBERON:0005291!3.76e-09!604;UBERON:0006598!3.76e-09!604;UBERON:0002532!3.76e-09!604;UBERON:0000468!5.09e-09!659;UBERON:0000922!1.24e-08!612;UBERON:0000467!1.81e-07!625;UBERON:0001737!2.55e-07!9;UBERON:0000480!2.66e-07!626;UBERON:0000073!6.51e-07!94;UBERON:0001016!6.51e-07!94;UBERON:0005743!6.68e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.23e-07;9!UBERON:0001557;2.23e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,3.09e-13,564;UBERON:0000923,3.37e-12,560;UBERON:0010316,3.37e-12,560;UBERON:0005291,3.37e-12,560;UBERON:0006598,3.37e-12,560;UBERON:0010317,3.37e-12,560;UBERON:0002532,3.37e-12,560;UBERON:0005423,6.35e-11,581;UBERON:0000922,9.28e-10,592;UBERON:0001737,2.54e-07,9 | |||
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| ||
|short_description=p3@ARPC5 | |||
}} | }} |
Latest revision as of 03:52, 19 September 2015
Short description: | p3@ARPC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARPC5_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENST00000294742_5end |
EntrezGene: | ARPC5 |
HGNC: | 708 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic structure | 3.09e-13 | 564 |
germ layer | 3.37e-12 | 560 |
germ layer / neural crest | 3.37e-12 | 560 |
embryonic tissue | 3.37e-12 | 560 |
presumptive structure | 3.37e-12 | 560 |
germ layer / neural crest derived structure | 3.37e-12 | 560 |
epiblast (generic) | 3.37e-12 | 560 |
developing anatomical structure | 6.35e-11 | 581 |
embryo | 9.28e-10 | 592 |
larynx | 2.54e-07 | 9 |