FFCP PHASE1:Hg19::chr19:49232649..49232659,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:49232649..49232659,-
|short_description=p6@RASIP1
|description=CAGE_peak_6_at_RASIP1_5end
|association_with_transcript=-296bp_to_BC021860_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54922 | |EntrezGene=54922 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24716 | |HGNC=24716 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L251 | |UniProt=Q7L251 | ||
|association_with_transcript=-296bp_to_BC021860_5end | |||
|cluster_id=chr19:49232649..49232659,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_6_at_RASIP1_5end | |||
|id=chr19:49232649..49232659,- | |||
|ontology_enrichment_celltype=CL:0000148!2.74e-09!10;CL:0000541!2.74e-09!10;CL:0000147!5.42e-08!14;CL:0002567!1.41e-07!3;CL:0002150!2.55e-07!3;CL:0000861!2.55e-07!3;CL:0002077!7.68e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.12e-27;3!CL:0000148;1.01e-14;10!CL:0000147;1.45e-10;14!CL:0000710;1.97e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.02e-27,3;CL:0000148,9.74e-15,10;CL:0000541,9.74e-15,10;CL:0000147,1.41e-10,14;CL:0000066,2.59e-09,253;CL:0000710,1.94e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.47e-23;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;7.54e-10;1!DOID:3165;7.54e-10;1!DOID:0060121;7.54e-10;1!DOID:2438;7.54e-10;1!DOID:4418;7.54e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.28e-13,106;DOID:0060085,7.55e-10,1;DOID:3165,7.55e-10,1;DOID:0060121,7.55e-10,1;DOID:2438,7.55e-10,1;DOID:4418,7.55e-10,1;DOID:0050687,1.79e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.53e-19!9;UBERON:0001557!3.58e-09!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.30e-76;9!UBERON:0001557;2.30e-76;9!UBERON:0000072;1.22e-16;37!UBERON:0000065;5.51e-14;44!UBERON:0001004;2.01e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.40e-77,9;UBERON:0001557,8.38e-36,19;UBERON:0008947,2.70e-17,38;UBERON:0003258,2.70e-17,38;UBERON:0000072,9.65e-14,47;UBERON:0000065,8.54e-12,54;UBERON:0001004,2.93e-08,74;UBERON:0001041,7.83e-07,87 | |||
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| ||
|short_description=p6@RASIP1 | |||
}} | }} |
Latest revision as of 03:55, 19 September 2015
Short description: | p6@RASIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RASIP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -296bp_to_BC021860_5end |
EntrezGene: | RASIP1 |
HGNC: | 24716 |
UniProt: | Q7L251 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.02e-27 | 3 |
melanocyte | 9.74e-15 | 10 |
melanoblast | 9.74e-15 | 10 |
pigment cell | 1.41e-10 | 14 |
epithelial cell | 2.59e-09 | 253 |
neurecto-epithelial cell | 1.94e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.40e-77 | 9 |
upper respiratory tract | 8.38e-36 | 19 |
respiratory primordium | 2.70e-17 | 38 |
endoderm of foregut | 2.70e-17 | 38 |
segment of respiratory tract | 9.65e-14 | 47 |
respiratory tract | 8.54e-12 | 54 |
respiratory system | 2.93e-08 | 74 |
foregut | 7.83e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.28e-13 | 106 |
organ system benign neoplasm | 7.55e-10 | 1 |
skin benign neoplasm | 7.55e-10 | 1 |
integumentary system benign neoplasm | 7.55e-10 | 1 |
dermis tumor | 7.55e-10 | 1 |
cutaneous fibrous histiocytoma | 7.55e-10 | 1 |
cell type cancer | 1.79e-09 | 143 |