FFCP PHASE1:Hg19::chr22:19950060..19950096,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:19950060..19950096,+ to FFCP PHASE1:Hg19::chr22:19950060..19950096,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1312 | |EntrezGene=1312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |HGNC=2228 | ||
|TSSclassifier=strong | |||
|UniProt=P21964 | |UniProt=P21964 | ||
|association_with_transcript=0bp_to_ENST00000449653,NM_007310_5end | |||
|cluster_id=chr22:19950060..19950096,+ | |||
|coexpression_cluster_id=C2638 | |||
|description=CAGE_peak_3_at_COMT_5end | |||
|id=chr22:19950060..19950096,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.11e-25!254;CL:0000223!6.09e-15!59;CL:0002076!3.91e-13!43;CL:0002321!4.29e-10!248;CL:0000220!1.03e-09!246;CL:0002251!1.37e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.07e-12;42!CL:0002251;1.81e-08;20!CL:0002368;5.33e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.97e-25,253;CL:0000223,2.76e-17,58;CL:0002076,1.72e-15,42;CL:0002251,1.42e-08,20;CL:0002321,4.89e-07,250;CL:0002368,5.16e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;3.77e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!2.64e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.81e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.70e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000481!3.54e-21!347;UBERON:0000475!1.15e-20!365;UBERON:0000468!1.87e-20!659;UBERON:0004119!2.92e-19!169;UBERON:0000925!2.92e-19!169;UBERON:0006595!2.92e-19!169;UBERON:0004111!4.87e-19!241;UBERON:0000922!2.93e-16!612;UBERON:0000467!5.46e-16!625;UBERON:0000477!7.22e-16!286;UBERON:0000480!1.13e-15!626;UBERON:0001007!3.05e-15!155;UBERON:0001555!3.05e-15!155;UBERON:0007026!3.05e-15!155;UBERON:0000483!5.16e-15!309;UBERON:0000119!1.89e-14!312;UBERON:0002050!4.17e-14!605;UBERON:0005423!4.17e-14!605;UBERON:0000923!8.43e-14!604;UBERON:0005291!8.43e-14!604;UBERON:0006598!8.43e-14!604;UBERON:0002532!8.43e-14!604;UBERON:0000064!1.09e-12!219;UBERON:0000466!1.60e-12!126;UBERON:0003104!4.48e-12!238;UBERON:0009142!4.48e-12!238;UBERON:0002100!9.20e-12!216;UBERON:0000062!1.10e-11!511;UBERON:0004921!1.32e-11!129;UBERON:0004185!1.32e-11!129;UBERON:0000077!1.67e-11!130;UBERON:0000025!4.04e-11!194;UBERON:0009569!1.37e-10!113;UBERON:0005177!1.58e-10!107;UBERON:0000464!1.10e-09!104;UBERON:0005911!3.65e-09!82;UBERON:0001004!4.01e-09!72;UBERON:0000033!3.48e-08!123;UBERON:0000161!3.61e-08!35;UBERON:0005256!4.10e-08!143;UBERON:0000166!4.78e-08!21;UBERON:0004121!5.04e-08!169;UBERON:0000153!6.49e-08!129;UBERON:0007811!6.49e-08!129;UBERON:0000924!7.22e-08!173;UBERON:0006601!7.22e-08!173;UBERON:0007023!8.43e-08!115;UBERON:0000165!1.28e-07!28;UBERON:0000930!1.28e-07!28;UBERON:0000915!1.47e-07!52;UBERON:0001041!1.50e-07!98;UBERON:0005178!1.61e-07!34;UBERON:0002224!1.61e-07!34;UBERON:0000058!1.87e-07!26;UBERON:0002365!1.89e-07!31;UBERON:0002330!1.89e-07!31;UBERON:0001444!2.45e-07!48;UBERON:0005631!3.16e-07!14;UBERON:0000158!3.16e-07!14;UBERON:0001008!6.84e-07!45;UBERON:0005181!7.55e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;8.03e-09;31!UBERON:0002330;8.03e-09;31!UBERON:0004921;1.86e-08;33!UBERON:0000165;7.24e-08;28!UBERON:0000161;1.09e-07;19!UBERON:0000166;1.09e-07;19!UBERON:0001555;2.24e-07;54!UBERON:0005178;3.13e-07;34!UBERON:0002224;3.13e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.14e-21,160;UBERON:0000925,1.14e-21,160;UBERON:0006595,1.14e-21,160;UBERON:0004111,6.21e-18,240;UBERON:0001007,1.18e-17,145;UBERON:0001555,1.18e-17,145;UBERON:0007026,1.18e-17,145;UBERON:0011216,4.91e-14,223;UBERON:0004921,5.07e-14,118;UBERON:0000922,1.04e-13,592;UBERON:0000483,2.54e-13,306;UBERON:0000119,1.12e-12,309;UBERON:0005423,2.11e-12,581;UBERON:0005177,2.36e-11,101;UBERON:0009569,2.51e-11,112;UBERON:0005911,2.78e-10,82;UBERON:0000025,6.78e-10,192;UBERON:0001041,1.04e-09,87;UBERON:0002050,1.27e-09,564;UBERON:0000033,1.85e-09,56;UBERON:0001004,1.86e-09,74;UBERON:0001008,1.95e-09,48;UBERON:0006554,4.08e-09,47;UBERON:0000166,6.14e-09,22;UBERON:0000153,6.86e-09,62;UBERON:0007811,6.86e-09,62;UBERON:0007023,7.03e-09,114;UBERON:0002365,7.77e-09,31;UBERON:0002330,7.77e-09,31;UBERON:0000923,1.07e-08,560;UBERON:0010316,1.07e-08,560;UBERON:0005291,1.07e-08,560;UBERON:0006598,1.07e-08,560;UBERON:0010317,1.07e-08,560;UBERON:0002532,1.07e-08,560;UBERON:0000161,1.07e-08,36;UBERON:0002100,1.86e-08,199;UBERON:0004121,2.36e-08,171;UBERON:0000924,2.36e-08,171;UBERON:0006601,2.36e-08,171;UBERON:0000165,5.61e-08,29;UBERON:0000930,5.61e-08,29;UBERON:0005631,6.63e-08,14;UBERON:0000158,6.63e-08,14;UBERON:0001444,7.48e-08,49;UBERON:0005178,7.64e-08,34;UBERON:0002224,7.64e-08,34;UBERON:0000915,8.84e-08,52;UBERON:0005181,2.55e-07,35 | |||
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| ||
|short_description=p3@COMT | |||
}} | }} |
Latest revision as of 04:05, 19 September 2015
Short description: | p3@COMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COMT_5end |
Coexpression cluster: | C2638_breast_bronchogenic_Amniotic_liver_endometrioid_Hepatocyte_serous |
Association with transcript: | 0bp_to_ENST00000449653, NM_007310_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | P21964 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.97e-25 | 253 |
endodermal cell | 2.76e-17 | 58 |
endo-epithelial cell | 1.72e-15 | 42 |
epithelial cell of alimentary canal | 1.42e-08 | 20 |
embryonic cell | 4.89e-07 | 250 |
respiratory epithelial cell | 5.16e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.70e-08 | 14 |