FFCP PHASE1:Hg19::chr18:3219959..3219972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8736 | |EntrezGene=8736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7613 | |HGNC=7613 | ||
|TSSclassifier=strong | |||
|UniProt=P52179,A8MX12 | |UniProt=P52179,A8MX12 | ||
|association_with_transcript=133bp_to_ENST00000261606,ENST00000356443,ENST00000400569,NM_003803,NM_019856,uc002klp.2,uc002klq.2_5end | |||
|cluster_id=chr18:3219959..3219972,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_MYOM1_5end | |||
|id=chr18:3219959..3219972,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;6.91e-08;65!UBERON:0005062;2.14e-07;4!UBERON:0007284;2.14e-07;4!UBERON:0003104;2.47e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.02e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-49!115;UBERON:0001049!8.74e-07!57;UBERON:0005068!8.74e-07!57;UBERON:0006241!8.74e-07!57;UBERON:0007135!8.74e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;7.75e-10;3!UBERON:0003978;9.37e-10;3!UBERON:0000946;9.37e-10;3!UBERON:0007100;2.18e-08;25!UBERON:0000922;4.03e-08;49!UBERON:0005090;2.65e-07;2!UBERON:0001630;2.65e-07;2!UBERON:0000341;5.23e-07;2!UBERON:0002081;6.22e-07;2!UBERON:0002133;6.50e-07;2!UBERON:0007023;6.59e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.38e-24,114;UBERON:0004151,7.76e-10,3;UBERON:0003978,9.24e-10,3;UBERON:0009751,9.24e-10,3;UBERON:0000946,9.24e-10,3;UBERON:0002523,9.24e-10,3;UBERON:0005983,9.24e-10,3;UBERON:0002165,9.24e-10,3;UBERON:0002062,9.24e-10,3;UBERON:0007280,9.24e-10,3;UBERON:0003103,3.00e-08,68;UBERON:0007100,1.25e-07,27;UBERON:0005090,2.65e-07,2;UBERON:0001630,2.65e-07,2;UBERON:0000341,5.23e-07,2;UBERON:0002081,6.23e-07,2;UBERON:0010227,6.23e-07,2;UBERON:0002133,6.41e-07,2 | |||
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| ||
|short_description=p3@MYOM1 | |||
}} | }} |
Latest revision as of 07:27, 19 September 2015
Short description: | p3@MYOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYOM1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 133bp_to_ENST00000261606, ENST00000356443, ENST00000400569, NM_003803, NM_019856, uc002klp.2, uc002klq.2_5end |
EntrezGene: | MYOM1 |
HGNC: | 7613 |
UniProt: | P52179A8MX12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.38e-24 | 114 |
cardiac chamber | 7.76e-10 | 3 |
valve | 9.24e-10 | 3 |
cardiac mesenchyme | 9.24e-10 | 3 |
cardial valve | 9.24e-10 | 3 |
tunica intima | 9.24e-10 | 3 |
heart layer | 9.24e-10 | 3 |
endocardium | 9.24e-10 | 3 |
endocardial cushion | 9.24e-10 | 3 |
presumptive endocardium | 9.24e-10 | 3 |
compound organ | 3.00e-08 | 68 |
primary circulatory organ | 1.25e-07 | 27 |
muscle structure | 2.65e-07 | 2 |
muscle organ | 2.65e-07 | 2 |
throat | 5.23e-07 | 2 |
cardiac atrium | 6.23e-07 | 2 |
future cardiac atrium | 6.23e-07 | 2 |
atrioventricular valve | 6.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.02e-07 | 2 |