FFCP PHASE1:Hg19::chr12:56121498..56121521,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=967 | |EntrezGene=967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1692 | |HGNC=1692 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZE2 | |UniProt=F8VZE2 | ||
|association_with_transcript=77bp_to_ENST00000550776_5end | |association_with_transcript=77bp_to_ENST00000550776_5end | ||
|cluster_id=chr12:56121498..56121521,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_25_at_CD63_5end | |description=CAGE_peak_25_at_CD63_5end | ||
|id=chr12:56121498..56121521,- | |id=chr12:56121498..56121521,- | ||
|ontology_enrichment_celltype=CL:0000055!1.11e-18!180;CL:0000680!8.93e-15!57;CL:0000056!8.93e-15!57;CL:0000355!8.93e-15!57;CL:0000187!1.70e-12!54;CL:0000192!1.93e-12!42;CL:0000514!1.93e-12!42;CL:0000183!2.49e-12!59;CL:0000359!7.26e-12!32;CL:0000393!4.78e-11!60;CL:0000211!4.78e-11!60;CL:0000222!8.05e-09!119;CL:0000048!5.57e-08!430;CL:0000723!9.02e-08!436;CL:0002539!1.28e-07!10;CL:0000034!4.05e-07!444;CL:0002371!7.47e-07!591;CL:0000220!8.44e-07!246 | |ontology_enrichment_celltype=CL:0000055!1.11e-18!180;CL:0000680!8.93e-15!57;CL:0000056!8.93e-15!57;CL:0000355!8.93e-15!57;CL:0000187!1.70e-12!54;CL:0000192!1.93e-12!42;CL:0000514!1.93e-12!42;CL:0000183!2.49e-12!59;CL:0000359!7.26e-12!32;CL:0000393!4.78e-11!60;CL:0000211!4.78e-11!60;CL:0000222!8.05e-09!119;CL:0000048!5.57e-08!430;CL:0000723!9.02e-08!436;CL:0002539!1.28e-07!10;CL:0000034!4.05e-07!444;CL:0002371!7.47e-07!591;CL:0000220!8.44e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.67e-24;10!CL:0000147;4.34e-17;14!CL:0002567;1.97e-16;3!CL:0000710;1.13e-11;20!CL:0000359;4.29e-09;32!CL:0000075;2.14e-08;27!CL:0002540;4.16e-08;6!CL:0002539;5.29e-08;10!CL:0002592;1.64e-07;3!CL:0000192;2.44e-07;43!CL:0002521;3.03e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.14e-24,10;CL:0000541,3.14e-24,10;CL:0000147,4.86e-17,14;CL:0002567,1.87e-16,3;CL:0000710,1.22e-11,20;CL:0000359,1.10e-08,32;CL:0000075,2.26e-08,27;CL:0002540,3.97e-08,6;CL:0002539,4.77e-08,10;CL:0000333,6.08e-08,41;CL:0000192,1.04e-07,43;CL:0000514,1.04e-07,43;CL:0002592,1.39e-07,3;CL:0002521,3.04e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;2.44e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.78e-16;3!DOID:127;1.78e-16;3!DOID:0060072;1.77e-12;4!DOID:1909;1.08e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.61e-16,3;DOID:127,1.61e-16,3;DOID:0060072,1.64e-12,4;DOID:1909,1.08e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004573!3.45e-14!33;UBERON:0004571!3.45e-14!33;UBERON:0001134!6.95e-14!61;UBERON:0002036!6.95e-14!61;UBERON:0003082!6.95e-14!61;UBERON:0002385!7.12e-14!63;UBERON:0001015!7.12e-14!63;UBERON:0000383!7.12e-14!63;UBERON:0004290!1.03e-13!70;UBERON:0000914!7.30e-13!83;UBERON:0002329!7.30e-13!83;UBERON:0003077!7.30e-13!83;UBERON:0003059!7.30e-13!83;UBERON:0007282!7.30e-13!83;UBERON:0009618!7.30e-13!83;UBERON:0007285!7.30e-13!83;UBERON:0000486!1.99e-12!82;UBERON:0001637!8.08e-12!42;UBERON:0003509!8.08e-12!42;UBERON:0004572!8.08e-12!42;UBERON:0000947!9.55e-09!21;UBERON:0010191!9.55e-09!21;UBERON:0002204!1.05e-08!167;UBERON:0005256!4.53e-08!143;UBERON:0004237!1.28e-07!10;UBERON:0004695!1.28e-07!10;UBERON:0002111!1.28e-07!10;UBERON:0004178!1.28e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;5.29e-08;10!UBERON:0004695;5.29e-08;10!UBERON:0002111;5.29e-08;10!UBERON:0004178;5.29e-08;10!UBERON:0003498;1.64e-07;3!UBERON:0005985;1.64e-07;3!UBERON:0001621;1.64e-07;3!UBERON:0002190;3.03e-07;3!UBERON:0002371;9.21e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003498,1.58e-09,5;UBERON:0005985,1.58e-09,5;UBERON:0004237,4.77e-08,10;UBERON:0004695,4.77e-08,10;UBERON:0002111,4.77e-08,10;UBERON:0004178,4.77e-08,10;UBERON:0007503,7.59e-08,78;UBERON:0001621,1.39e-07,3;UBERON:0002329,1.87e-07,71;UBERON:0003059,1.87e-07,71;UBERON:0007282,1.87e-07,71;UBERON:0004290,1.87e-07,71;UBERON:0009618,1.87e-07,71;UBERON:0003077,2.55e-07,72;UBERON:0007285,2.55e-07,72;UBERON:0002190,3.04e-07,3;UBERON:0007524,3.45e-07,73 | |||
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| ||
|short_description=p25@CD63 | |short_description=p25@CD63 | ||
}} | }} |
Latest revision as of 08:12, 19 September 2015
Short description: | p25@CD63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_CD63_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 77bp_to_ENST00000550776_5end |
EntrezGene: | CD63 |
HGNC: | 1692 |
UniProt: | F8VZE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.14e-24 | 10 |
melanoblast | 3.14e-24 | 10 |
pigment cell | 4.86e-17 | 14 |
light melanocyte | 1.87e-16 | 3 |
neurecto-epithelial cell | 1.22e-11 | 20 |
vascular associated smooth muscle cell | 1.10e-08 | 32 |
columnar/cuboidal epithelial cell | 2.26e-08 | 27 |
mesenchymal stem cell of the bone marrow | 3.97e-08 | 6 |
aortic smooth muscle cell | 4.77e-08 | 10 |
migratory neural crest cell | 6.08e-08 | 41 |
smooth muscle cell | 1.04e-07 | 43 |
smooth muscle myoblast | 1.04e-07 | 43 |
smooth muscle cell of the coronary artery | 1.39e-07 | 3 |
subcutaneous fat cell | 3.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart blood vessel | 1.58e-09 | 5 |
coronary vessel | 1.58e-09 | 5 |
blood vessel smooth muscle | 4.77e-08 | 10 |
arterial system smooth muscle | 4.77e-08 | 10 |
artery smooth muscle tissue | 4.77e-08 | 10 |
aorta smooth muscle tissue | 4.77e-08 | 10 |
epithelial vesicle | 7.59e-08 | 78 |
coronary artery | 1.39e-07 | 3 |
somite | 1.87e-07 | 71 |
presomitic mesoderm | 1.87e-07 | 71 |
presumptive segmental plate | 1.87e-07 | 71 |
dermomyotome | 1.87e-07 | 71 |
trunk paraxial mesoderm | 1.87e-07 | 71 |
paraxial mesoderm | 2.55e-07 | 72 |
presumptive paraxial mesoderm | 2.55e-07 | 72 |
subcutaneous adipose tissue | 3.04e-07 | 3 |
dense mesenchyme tissue | 3.45e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.61e-16 | 3 |
leiomyoma | 1.61e-16 | 3 |
benign neoplasm | 1.64e-12 | 4 |
melanoma | 1.08e-11 | 2 |