FFCP PHASE1:Hg19::chr8:90996837..90996906,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4683 | |EntrezGene=4683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7652 | |HGNC=7652 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3R2,E5RGU1,E2QRP0,O60934 | |UniProt=F5H3R2,E5RGU1,E2QRP0,O60934 | ||
|association_with_transcript=0bp_to_ENST00000452387,ENST00000494804,ENST00000519426,ENST00000523444,NM_002485,uc003yei.1,uc003yej.1,uc011lgb.1_5end | |association_with_transcript=0bp_to_ENST00000452387,ENST00000494804,ENST00000519426,ENST00000523444,NM_002485,uc003yei.1,uc003yej.1,uc011lgb.1_5end | ||
|cluster_id=chr8:90996837..90996906,- | |||
|description=CAGE_peak_1_at_NBN_5end | |description=CAGE_peak_1_at_NBN_5end | ||
|id=chr8:90996837..90996906,- | |id=chr8:90996837..90996906,- | ||
|ontology_enrichment_celltype=CL:0000037!6.03e-20!172;CL:0000566!6.03e-20!172;CL:0002032!2.41e-18!165;CL:0000837!2.41e-18!165;CL:0000988!5.79e-18!182;CL:0000763!5.29e-14!112;CL:0000049!5.29e-14!112;CL:0000738!7.06e-11!140;CL:0002087!1.98e-08!119;CL:0002031!3.32e-08!124;CL:0000945!2.77e-07!24;CL:0000826!2.77e-07!24 | |ontology_enrichment_celltype=CL:0000037!6.03e-20!172;CL:0000566!6.03e-20!172;CL:0002032!2.41e-18!165;CL:0000837!2.41e-18!165;CL:0000988!5.79e-18!182;CL:0000763!5.29e-14!112;CL:0000049!5.29e-14!112;CL:0000738!7.06e-11!140;CL:0002087!1.98e-08!119;CL:0002031!3.32e-08!124;CL:0000945!2.77e-07!24;CL:0000826!2.77e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.27e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.89e-20,168;CL:0000988,2.84e-18,177;CL:0002032,3.53e-18,161;CL:0000837,3.53e-18,161;CL:0000763,6.74e-14,108;CL:0000049,6.74e-14,108;CL:0000738,1.04e-10,136;CL:0002087,2.85e-08,115;CL:0002031,4.82e-08,120;CL:0000945,2.77e-07,24;CL:0000826,2.77e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!9.01e-16!51;DOID:0060083!9.01e-16!51;DOID:8692!8.21e-14!31;DOID:1240!1.40e-13!39;DOID:162!2.50e-13!235;DOID:14566!3.76e-12!239;DOID:0050686!7.60e-08!137;DOID:305!8.57e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.56e-13;31!DOID:1240;4.39e-11;39!DOID:2531;3.38e-09;51!DOID:0060083;3.38e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.01e-16,51;DOID:0060083,9.01e-16,51;DOID:8692,8.21e-14,31;DOID:1240,1.40e-13,39;DOID:162,2.50e-13,235;DOID:14566,3.76e-12,239;DOID:0050686,7.60e-08,137;DOID:305,8.57e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@NBN | |short_description=p1@NBN | ||
}} | }} |
Latest revision as of 10:17, 19 September 2015
Short description: | p1@NBN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NBN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000452387, ENST00000494804, ENST00000519426, ENST00000523444, NM_002485, uc003yei.1, uc003yej.1, uc011lgb.1_5end |
EntrezGene: | NBN |
HGNC: | 7652 |
UniProt: | F5H3R2E5RGU1E2QRP0O60934 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.89e-20 | 168 |
hematopoietic cell | 2.84e-18 | 177 |
hematopoietic oligopotent progenitor cell | 3.53e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.53e-18 | 161 |
myeloid cell | 6.74e-14 | 108 |
common myeloid progenitor | 6.74e-14 | 108 |
leukocyte | 1.04e-10 | 136 |
nongranular leukocyte | 2.85e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 4.82e-08 | 120 |
lymphocyte of B lineage | 2.77e-07 | 24 |
pro-B cell | 2.77e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.01e-16 | 51 |
immune system cancer | 9.01e-16 | 51 |
myeloid leukemia | 8.21e-14 | 31 |
leukemia | 1.40e-13 | 39 |
cancer | 2.50e-13 | 235 |
disease of cellular proliferation | 3.76e-12 | 239 |
organ system cancer | 7.60e-08 | 137 |
carcinoma | 8.57e-07 | 106 |