FFCP PHASE1:Hg19::chr17:29579156..29579161,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:29579156..29579161,+
|short_description=p4@NF1
|description=CAGE_peak_4_at_NF1_5end
|association_with_transcript=-399bp_to_AK024873_5end
|EntrezGene=4763...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4763 | |EntrezGene=4763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7765 | |HGNC=7765 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-399bp_to_AK024873_5end | |||
|cluster_id=chr17:29579156..29579161,+ | |||
|description=CAGE_peak_4_at_NF1_5end | |||
|id=chr17:29579156..29579161,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.26e-12!239;DOID:162!1.66e-12!235;DOID:0050687!3.64e-11!143;DOID:305!1.22e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.68e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.46e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;8.06e-11;2!UBERON:0002133;8.06e-11;2!UBERON:0003978;1.76e-07;3!UBERON:0004151;1.76e-07;3!UBERON:0000946;1.76e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,5.39e-11,2;UBERON:0010227,5.39e-11,2;UBERON:0002133,1.35e-10,2;UBERON:0004151,1.35e-07,3;UBERON:0003978,2.47e-07,3;UBERON:0009751,2.47e-07,3;UBERON:0000946,2.47e-07,3;UBERON:0002523,2.47e-07,3;UBERON:0005983,2.47e-07,3;UBERON:0002165,2.47e-07,3;UBERON:0002062,2.47e-07,3;UBERON:0007280,2.47e-07,3 | |||
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|short_description=p4@NF1 | |||
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Latest revision as of 10:55, 19 September 2015
Short description: | p4@NF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -399bp_to_AK024873_5end |
EntrezGene: | NF1 |
HGNC: | 7765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 5.39e-11 | 2 |
future cardiac atrium | 5.39e-11 | 2 |
atrioventricular valve | 1.35e-10 | 2 |
cardiac chamber | 1.35e-07 | 3 |
valve | 2.47e-07 | 3 |
cardiac mesenchyme | 2.47e-07 | 3 |
cardial valve | 2.47e-07 | 3 |
tunica intima | 2.47e-07 | 3 |
heart layer | 2.47e-07 | 3 |
endocardium | 2.47e-07 | 3 |
endocardial cushion | 2.47e-07 | 3 |
presumptive endocardium | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.46e-09 | 14 |