FFCP PHASE1:Hg19::chr22:24891293..24891310,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51733 | |EntrezGene=51733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16297 | |HGNC=16297 | ||
|TSSclassifier=strong | |||
|UniProt=B3KNC1,Q9UBR1 | |UniProt=B3KNC1,Q9UBR1 | ||
|association_with_transcript=42bp_to_NM_016327_5end | |association_with_transcript=42bp_to_NM_016327_5end | ||
|cluster_id=chr22:24891293..24891310,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_UPB1_5end | |description=CAGE_peak_1_at_UPB1_5end | ||
|id=chr22:24891293..24891310,+ | |id=chr22:24891293..24891310,+ | ||
|ontology_enrichment_celltype=CL:0000039!6.10e-08!7;CL:0000586!6.10e-08!7;CL:0002563!4.76e-07!4 | |ontology_enrichment_celltype=CL:0000039!6.10e-08!7;CL:0000586!6.10e-08!7;CL:0002563!4.76e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;4.26e-14;4!CL:0000182;9.61e-11;12!CL:0002253;8.89e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.12e-14,4;CL:0000182,9.61e-11,12;CL:0000223,5.87e-08,58;CL:0002253,8.60e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.20e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.01e-11!8;UBERON:0005057!1.55e-10!26;UBERON:0003929!1.90e-09!54;UBERON:0003135!1.47e-08!11;UBERON:0002107!5.02e-08!19;UBERON:0006925!5.02e-08!19;UBERON:0008836!5.02e-08!19;UBERON:0002368!1.27e-07!35;UBERON:0005172!1.74e-07!55;UBERON:0005173!1.74e-07!55;UBERON:0001242!4.76e-07!4;UBERON:0001262!4.76e-07!4;UBERON:0004786!4.76e-07!4;UBERON:0004808!4.76e-07!4;UBERON:0001277!4.76e-07!4;UBERON:0007190!6.57e-07!1;UBERON:0008835!6.85e-07!22;UBERON:0003894!6.85e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.21e-17;19!UBERON:0006925;1.21e-17;19!UBERON:0001242;4.26e-14;4!UBERON:0001262;4.26e-14;4!UBERON:0004786;4.26e-14;4!UBERON:0004808;4.26e-14;4!UBERON:0001277;4.26e-14;4!UBERON:0002423;2.07e-13;25!UBERON:0002365;8.42e-11;31!UBERON:0002330;8.42e-11;31!UBERON:0002368;2.21e-09;33!UBERON:0005172;4.86e-09;52!UBERON:0005173;4.86e-09;52!UBERON:0000485;1.88e-08;7!UBERON:0003929;1.88e-08;7!UBERON:0001007;1.04e-07;81!UBERON:0003350;1.68e-07;8!UBERON:0000160;4.11e-07;17!UBERON:0000949;6.45e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.21e-17,19;UBERON:0006925,1.21e-17,19;UBERON:0008836,1.21e-17,19;UBERON:0008835,3.07e-15,22;UBERON:0003894,3.07e-15,22;UBERON:0003929,5.28e-15,54;UBERON:0009854,1.41e-14,23;UBERON:0001242,4.12e-14,4;UBERON:0001262,4.12e-14,4;UBERON:0004786,4.12e-14,4;UBERON:0004808,4.12e-14,4;UBERON:0001277,4.12e-14,4;UBERON:0007499,2.07e-13,25;UBERON:0009497,2.07e-13,25;UBERON:0000015,2.07e-13,25;UBERON:0002423,2.07e-13,25;UBERON:0006235,2.07e-13,25;UBERON:0004161,2.07e-13,25;UBERON:0009856,6.78e-13,26;UBERON:0005172,1.49e-11,54;UBERON:0005173,1.49e-11,54;UBERON:0002365,8.25e-11,31;UBERON:0002330,8.25e-11,31;UBERON:0002417,2.42e-10,60;UBERON:0000916,2.42e-10,60;UBERON:0005911,1.28e-09,82;UBERON:0002368,1.44e-09,35;UBERON:0004921,4.70e-08,118;UBERON:0002530,7.52e-08,59;UBERON:0003350,1.65e-07,8;UBERON:0000949,2.01e-07,45;UBERON:0000160,4.11e-07,17;UBERON:0000485,9.10e-07,9 | |||
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|short_description=p1@UPB1 | |short_description=p1@UPB1 | ||
}} | }} |
Latest revision as of 10:57, 19 September 2015
Short description: | p1@UPB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UPB1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 42bp_to_NM_016327_5end |
EntrezGene: | UPB1 |
HGNC: | 16297 |
UniProt: | B3KNC1Q9UBR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.12e-14 | 4 |
hepatocyte | 9.61e-11 | 12 |
endodermal cell | 5.87e-08 | 58 |
epithelial cell of large intestine | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.21e-17 | 19 |
digestive gland | 1.21e-17 | 19 |
liver bud | 1.21e-17 | 19 |
hepatic diverticulum | 3.07e-15 | 22 |
liver primordium | 3.07e-15 | 22 |
gut epithelium | 5.28e-15 | 54 |
digestive tract diverticulum | 1.41e-14 | 23 |
intestinal mucosa | 4.12e-14 | 4 |
wall of intestine | 4.12e-14 | 4 |
gastrointestinal system mucosa | 4.12e-14 | 4 |
gastrointestinal system epithelium | 4.12e-14 | 4 |
intestinal epithelium | 4.12e-14 | 4 |
epithelial sac | 2.07e-13 | 25 |
epithelium of foregut-midgut junction | 2.07e-13 | 25 |
anatomical boundary | 2.07e-13 | 25 |
hepatobiliary system | 2.07e-13 | 25 |
foregut-midgut junction | 2.07e-13 | 25 |
septum transversum | 2.07e-13 | 25 |
sac | 6.78e-13 | 26 |
abdomen element | 1.49e-11 | 54 |
abdominal segment element | 1.49e-11 | 54 |
exocrine gland | 8.25e-11 | 31 |
exocrine system | 8.25e-11 | 31 |
abdominal segment of trunk | 2.42e-10 | 60 |
abdomen | 2.42e-10 | 60 |
endo-epithelium | 1.28e-09 | 82 |
endocrine gland | 1.44e-09 | 35 |
subdivision of digestive tract | 4.70e-08 | 118 |
gland | 7.52e-08 | 59 |
epithelium of mucosa | 1.65e-07 | 8 |
endocrine system | 2.01e-07 | 45 |
intestine | 4.11e-07 | 17 |
simple columnar epithelium | 9.10e-07 | 9 |