FFCP PHASE1:Hg19::chrX:133507431..133507456,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84295 | |EntrezGene=84295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18145 | |HGNC=18145 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000370800_5end | |association_with_transcript=28bp_to_ENST00000370800_5end | ||
|cluster_id=chrX:133507431..133507456,+ | |||
|description=CAGE_peak_3_at_PHF6_5end | |description=CAGE_peak_3_at_PHF6_5end | ||
|id=chrX:133507431..133507456,+ | |id=chrX:133507431..133507456,+ | ||
|ontology_enrichment_celltype=CL:0000542!8.64e-18!53;CL:0000051!8.64e-18!53;CL:0000838!3.16e-17!52;CL:0000037!2.02e-12!172;CL:0000566!2.02e-12!172;CL:0000988!1.62e-11!182;CL:0000945!3.01e-11!24;CL:0000826!3.01e-11!24;CL:0002032!1.09e-10!165;CL:0000837!1.09e-10!165;CL:0000738!6.27e-09!140;CL:0002087!1.20e-08!119;CL:0002031!3.80e-08!124;CL:0000236!4.09e-08!14;CL:0000084!4.42e-07!25;CL:0000827!4.42e-07!25 | |ontology_enrichment_celltype=CL:0000542!8.64e-18!53;CL:0000051!8.64e-18!53;CL:0000838!3.16e-17!52;CL:0000037!2.02e-12!172;CL:0000566!2.02e-12!172;CL:0000988!1.62e-11!182;CL:0000945!3.01e-11!24;CL:0000826!3.01e-11!24;CL:0002032!1.09e-10!165;CL:0000837!1.09e-10!165;CL:0000738!6.27e-09!140;CL:0002087!1.20e-08!119;CL:0002031!3.80e-08!124;CL:0000236!4.09e-08!14;CL:0000084!4.42e-07!25;CL:0000827!4.42e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.33e-14;24!CL:0000542;4.66e-13;53!CL:0000236;1.15e-09;13!CL:0000084;5.36e-08;25!CL:0000791;8.07e-07;18!CL:0000789;8.07e-07;18!CL:0002419;8.07e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.86e-22,53;CL:0000051,6.86e-22,53;CL:0000838,4.24e-21,52;CL:0000945,1.06e-14,24;CL:0000826,1.06e-14,24;CL:0000236,3.97e-11,14;CL:0000988,6.29e-10,177;CL:0000037,9.54e-10,168;CL:0000084,3.86e-08,25;CL:0000827,3.86e-08,25;CL:0002032,4.49e-08,161;CL:0000837,4.49e-08,161;CL:0000791,5.76e-07,18;CL:0000789,5.76e-07,18;CL:0002420,5.76e-07,18;CL:0002419,5.76e-07,18;CL:0000790,5.76e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;4.66e-13;53!CL:0000790;8.07e-07;18 | |||
|ontology_enrichment_disease=DOID:162!1.35e-15!235;DOID:14566!3.75e-14!239;DOID:0050687!4.33e-10!143;DOID:0050686!2.78e-09!137;DOID:2531!1.59e-08!51;DOID:0060083!1.59e-08!51;DOID:305!4.88e-08!106 | |ontology_enrichment_disease=DOID:162!1.35e-15!235;DOID:14566!3.75e-14!239;DOID:0050687!4.33e-10!143;DOID:0050686!2.78e-09!137;DOID:2531!1.59e-08!51;DOID:0060083!1.59e-08!51;DOID:305!4.88e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:2531;8.11e-08;51!DOID:0060083;8.11e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.71e-18,235;DOID:14566,7.53e-17,239;DOID:0050686,1.81e-12,137;DOID:2531,9.07e-12,51;DOID:0060083,9.07e-12,51;DOID:0050687,6.41e-09,143;DOID:1240,2.10e-08,39;DOID:305,2.68e-07,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@PHF6 | |short_description=p3@PHF6 | ||
}} | }} |
Latest revision as of 12:38, 19 September 2015
Short description: | p3@PHF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000370800_5end |
EntrezGene: | PHF6 |
HGNC: | 18145 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.86e-22 | 53 |
common lymphoid progenitor | 6.86e-22 | 53 |
lymphoid lineage restricted progenitor cell | 4.24e-21 | 52 |
lymphocyte of B lineage | 1.06e-14 | 24 |
pro-B cell | 1.06e-14 | 24 |
B cell | 3.97e-11 | 14 |
hematopoietic cell | 6.29e-10 | 177 |
hematopoietic stem cell | 9.54e-10 | 168 |
T cell | 3.86e-08 | 25 |
pro-T cell | 3.86e-08 | 25 |
hematopoietic oligopotent progenitor cell | 4.49e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.49e-08 | 161 |
mature alpha-beta T cell | 5.76e-07 | 18 |
alpha-beta T cell | 5.76e-07 | 18 |
immature T cell | 5.76e-07 | 18 |
mature T cell | 5.76e-07 | 18 |
immature alpha-beta T cell | 5.76e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.71e-18 | 235 |
disease of cellular proliferation | 7.53e-17 | 239 |
organ system cancer | 1.81e-12 | 137 |
hematologic cancer | 9.07e-12 | 51 |
immune system cancer | 9.07e-12 | 51 |
cell type cancer | 6.41e-09 | 143 |
leukemia | 2.10e-08 | 39 |
carcinoma | 2.68e-07 | 106 |