FFCP PHASE1:Hg19::chr11:65819813..65819855,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:65819813..65819855,+ to FFCP PHASE1:Hg19::chr11:65819813..65819855,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10992 | |EntrezGene=10992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10769 | |HGNC=10769 | ||
|TSSclassifier=strong | |||
|UniProt=Q13435,E9PJT3,E9PJ04 | |UniProt=Q13435,E9PJT3,E9PJ04 | ||
|association_with_transcript=0bp_to_ENST00000355456,ENST00000524627,ENST00000531041,ENST00000533595,NM_006842,uc001ogx.1,uc001ogy.1_5end | |||
|cluster_id=chr11:65819813..65819855,+ | |||
|description=CAGE_peak_1_at_SF3B2_5end | |||
|id=chr11:65819813..65819855,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.45e-14!679;CL:0000004!1.45e-14!679;CL:0000255!1.45e-14!679;CL:0000012!8.90e-14!682;CL:0000055!7.86e-12!180;CL:0000066!7.59e-09!254;CL:0000003!9.92e-09!722;CL:0000144!1.50e-08!625;CL:0002371!7.63e-08!591;CL:1000449!1.94e-07!16;CL:0000076!3.20e-07!62;CL:0002321!6.74e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.64e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.17e-09,253;CL:1000449,1.69e-07,15;CL:0002321,4.05e-07,250;CL:0000076,5.26e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!8.19e-08!312;UBERON:0004211!1.94e-07!16;UBERON:0001285!1.94e-07!16;UBERON:0007684!1.94e-07!16;UBERON:0003220!1.94e-07!16;UBERON:0004208!1.94e-07!16;UBERON:0000483!3.77e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.64e-07;15!UBERON:0004819;1.64e-07;15!UBERON:0001285;1.64e-07;15!UBERON:0007684;1.64e-07;15!UBERON:0006554;9.62e-07;30!UBERON:0001008;9.62e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.69e-07,15;UBERON:0009773,1.69e-07,15;UBERON:0001231,1.69e-07,15;UBERON:0001285,1.69e-07,15;UBERON:0007684,1.69e-07,15;UBERON:0004208,1.69e-07,15;UBERON:0000119,4.40e-07,309 | |||
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923500353494,135.279903751964 | ||
|short_description=p1@SF3B2 | |||
}} | }} |
Latest revision as of 12:56, 19 September 2015
Short description: | p1@SF3B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SF3B2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355456, ENST00000524627, ENST00000531041, ENST00000533595, NM_006842, uc001ogx.1, uc001ogy.1_5end |
EntrezGene: | SF3B2 |
HGNC: | 10769 |
UniProt: | Q13435E9PJT3E9PJ04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.17e-09 | 253 |
epithelial cell of nephron | 1.69e-07 | 15 |
embryonic cell | 4.05e-07 | 250 |
squamous epithelial cell | 5.26e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.69e-07 | 15 |
renal tubule | 1.69e-07 | 15 |
nephron tubule | 1.69e-07 | 15 |
nephron | 1.69e-07 | 15 |
uriniferous tubule | 1.69e-07 | 15 |
nephrogenic mesenchyme | 1.69e-07 | 15 |
cell layer | 4.40e-07 | 309 |