FFCP PHASE1:Hg19::chr22:26986045..26986106,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8459 | |EntrezGene=8459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12021 | |HGNC=12021 | ||
|TSSclassifier=strong | |||
|UniProt=B1AHJ8,B1AHJ6,B1AHK0,B7Z976,O60704 | |UniProt=B1AHJ8,B1AHJ6,B1AHK0,B7Z976,O60704 | ||
|association_with_transcript=0bp_to_ENST00000440953,ENST00000442495,ENST00000450022,ENST00000528868,NM_003595,uc003acx.2,uc011akf.1_5end | |association_with_transcript=0bp_to_ENST00000440953,ENST00000442495,ENST00000450022,ENST00000528868,NM_003595,uc003acx.2,uc011akf.1_5end | ||
|cluster_id=chr22:26986045..26986106,- | |||
|description=CAGE_peak_1_at_TPST2_5end | |description=CAGE_peak_1_at_TPST2_5end | ||
|id=chr22:26986045..26986106,- | |id=chr22:26986045..26986106,- | ||
|ontology_enrichment_celltype=CL:0000134!7.28e-18!358;CL:0002320!7.81e-18!365;CL:0000034!1.05e-15!444;CL:0000219!4.88e-15!390;CL:0000048!5.79e-14!430;CL:0000723!1.26e-13!436;CL:0002371!3.97e-13!591;CL:0000144!6.99e-11!625;CL:0000766!9.24e-09!76;CL:0000763!1.25e-08!112;CL:0000049!1.25e-08!112;CL:0000037!1.55e-08!172;CL:0000566!1.55e-08!172;CL:0000988!3.17e-08!182;CL:0000115!4.79e-08!35;CL:0002032!1.06e-07!165;CL:0000837!1.06e-07!165;CL:0000839!2.71e-07!70;CL:0000738!7.55e-07!140 | |ontology_enrichment_celltype=CL:0000134!7.28e-18!358;CL:0002320!7.81e-18!365;CL:0000034!1.05e-15!444;CL:0000219!4.88e-15!390;CL:0000048!5.79e-14!430;CL:0000723!1.26e-13!436;CL:0002371!3.97e-13!591;CL:0000144!6.99e-11!625;CL:0000766!9.24e-09!76;CL:0000763!1.25e-08!112;CL:0000049!1.25e-08!112;CL:0000037!1.55e-08!172;CL:0000566!1.55e-08!172;CL:0000988!3.17e-08!182;CL:0000115!4.79e-08!35;CL:0002032!1.06e-07!165;CL:0000837!1.06e-07!165;CL:0000839!2.71e-07!70;CL:0000738!7.55e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.21e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000134,7.30e-19,354;CL:0002320,8.00e-19,361;CL:0000034,2.79e-16,441;CL:0000219,6.52e-16,386;CL:0000048,1.65e-14,427;CL:0000723,3.65e-14,433;CL:0000766,2.83e-10,72;CL:0000763,8.43e-10,108;CL:0000049,8.43e-10,108;CL:0000037,1.92e-09,168;CL:0000988,7.37e-09,177;CL:0000839,1.08e-08,66;CL:0002032,1.45e-08,161;CL:0000837,1.45e-08,161;CL:0000115,2.31e-08,36;CL:0000557,6.25e-08,67;CL:0000738,1.01e-07,136;CL:0002031,5.30e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.47e-17!375;UBERON:0002193!2.76e-12!112;UBERON:0002405!1.92e-10!115;UBERON:0002390!4.62e-10!102;UBERON:0003061!4.62e-10!102;UBERON:0003081!5.31e-10!216;UBERON:0002371!1.38e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.42e-18,371;UBERON:0002193,8.93e-14,108;UBERON:0003081,5.57e-12,203;UBERON:0002390,1.93e-11,98;UBERON:0003061,1.93e-11,98;UBERON:0002405,6.89e-11,93;UBERON:0002371,6.61e-09,76;UBERON:0000926,5.07e-08,315;UBERON:0004120,5.07e-08,315;UBERON:0006603,5.07e-08,315;UBERON:0001474,1.29e-07,82;UBERON:0001434,3.99e-07,100;UBERON:0004765,8.50e-07,90 | |||
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| ||
|short_description=p1@TPST2 | |short_description=p1@TPST2 | ||
}} | }} |
Latest revision as of 13:08, 19 September 2015
Short description: | p1@TPST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPST2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000440953, ENST00000442495, ENST00000450022, ENST00000528868, NM_003595, uc003acx.2, uc011akf.1_5end |
EntrezGene: | TPST2 |
HGNC: | 12021 |
UniProt: | B1AHJ8B1AHJ6B1AHK0B7Z976O60704 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal cell | 7.30e-19 | 354 |
connective tissue cell | 8.00e-19 | 361 |
stem cell | 2.79e-16 | 441 |
motile cell | 6.52e-16 | 386 |
multi fate stem cell | 1.65e-14 | 427 |
somatic stem cell | 3.65e-14 | 433 |
myeloid leukocyte | 2.83e-10 | 72 |
myeloid cell | 8.43e-10 | 108 |
common myeloid progenitor | 8.43e-10 | 108 |
hematopoietic stem cell | 1.92e-09 | 168 |
hematopoietic cell | 7.37e-09 | 177 |
myeloid lineage restricted progenitor cell | 1.08e-08 | 66 |
hematopoietic oligopotent progenitor cell | 1.45e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-08 | 161 |
endothelial cell | 2.31e-08 | 36 |
granulocyte monocyte progenitor cell | 6.25e-08 | 67 |
leukocyte | 1.01e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 5.30e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.42e-18 | 371 |
hemolymphoid system | 8.93e-14 | 108 |
lateral plate mesoderm | 5.57e-12 | 203 |
hematopoietic system | 1.93e-11 | 98 |
blood island | 1.93e-11 | 98 |
immune system | 6.89e-11 | 93 |
bone marrow | 6.61e-09 | 76 |
mesoderm | 5.07e-08 | 315 |
mesoderm-derived structure | 5.07e-08 | 315 |
presumptive mesoderm | 5.07e-08 | 315 |
bone element | 1.29e-07 | 82 |
skeletal system | 3.99e-07 | 100 |
skeletal element | 8.50e-07 | 90 |