FFCP PHASE1:Hg19::chr11:66008716..66008729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55690 | |EntrezGene=55690 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30032 | |HGNC=30032 | ||
|TSSclassifier=strong | |||
|UniProt=E9PSE1 | |UniProt=E9PSE1 | ||
|association_with_transcript=18bp_to_ENST00000531597_5end | |association_with_transcript=18bp_to_ENST00000531597_5end | ||
|cluster_id=chr11:66008716..66008729,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_24_at_PACS1_5end | |description=CAGE_peak_24_at_PACS1_5end | ||
|id=chr11:66008716..66008729,+ | |id=chr11:66008716..66008729,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.54e-20!7;UBERON:0001872!3.54e-16!5;UBERON:0001869!1.79e-15!32;UBERON:0001893!1.56e-14!34;UBERON:0001950!3.60e-14!20;UBERON:0002619!6.67e-13!22;UBERON:0002106!2.83e-12!3;UBERON:0004854!2.83e-12!3;UBERON:0009034!2.83e-12!3;UBERON:0002095!2.83e-12!3;UBERON:0004782!2.83e-12!3;UBERON:0003281!2.83e-12!3;UBERON:0009664!2.83e-12!3;UBERON:0002296!2.83e-12!3;UBERON:0005602!2.83e-12!3;UBERON:0001179!2.83e-12!3;UBERON:0006293!2.83e-12!3;UBERON:0002780!6.01e-12!41;UBERON:0001890!6.01e-12!41;UBERON:0006240!6.01e-12!41;UBERON:0003080!1.20e-11!42;UBERON:0002791!1.63e-11!33;UBERON:0000956!2.30e-11!25;UBERON:0000203!2.30e-11!25;UBERON:0002020!3.64e-11!34;UBERON:0003528!3.64e-11!34;UBERON:0003112!2.84e-10!1;UBERON:0000032!2.84e-10!1;UBERON:0005253!2.84e-10!1;UBERON:0003128!2.84e-10!1;UBERON:0002241!2.84e-10!1;UBERON:0001703!2.84e-10!1;UBERON:0004761!2.84e-10!1;UBERON:0009617!2.84e-10!1;UBERON:0002370!4.45e-10!4;UBERON:0005058!4.45e-10!4;UBERON:0009113!4.45e-10!4;UBERON:0003295!4.45e-10!4;UBERON:0005562!4.45e-10!4;UBERON:0002581!4.85e-10!1;UBERON:0007190!5.79e-10!1;UBERON:0002902!7.55e-10!1;UBERON:0009899!7.55e-10!1;UBERON:0001882!9.82e-10!1;UBERON:0005403!9.82e-10!1;UBERON:0002022!1.17e-09!1;UBERON:0000974!1.17e-08!10;UBERON:0001049!2.24e-08!57;UBERON:0005068!2.24e-08!57;UBERON:0006241!2.24e-08!57;UBERON:0007135!2.24e-08!57;UBERON:0002616!4.60e-08!59;UBERON:0003056!9.02e-08!61;UBERON:0000153!1.65e-07!129;UBERON:0007811!1.65e-07!129;UBERON:0007023!2.63e-07!115;UBERON:0003351!5.42e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.61e-131;2!UBERON:0005058;4.61e-131;2!UBERON:0009113;4.61e-131;2!UBERON:0004177;2.19e-53;5!UBERON:0005057;2.19e-53;5!UBERON:0000077;6.25e-11;27!UBERON:0002405;6.25e-11;27!UBERON:0002368;2.43e-07;33!UBERON:0002390;2.44e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.40e-66,4;UBERON:0005058,2.40e-66,4;UBERON:0009113,2.40e-66,4;UBERON:0003295,2.40e-66,4;UBERON:0005562,2.40e-66,4;UBERON:0003351,9.76e-45,6;UBERON:0004177,1.49e-38,7;UBERON:0005057,1.49e-38,7;UBERON:0000974,2.08e-27,10;UBERON:0003408,2.08e-27,10;UBERON:0001042,2.08e-27,10;UBERON:0009145,2.08e-27,10;UBERON:0006562,4.86e-25,11;UBERON:0009722,4.86e-25,11;UBERON:0007690,4.86e-25,11;UBERON:0008814,8.40e-16,18;UBERON:0001557,4.91e-15,19;UBERON:0004807,1.40e-10,28;UBERON:0000077,2.96e-10,29;UBERON:0002368,1.09e-08,35;UBERON:0000949,5.42e-07,45;UBERON:0000072,9.72e-07,47 | |||
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|short_description=p24@PACS1 | |short_description=p24@PACS1 | ||
}} | }} |
Latest revision as of 13:10, 19 September 2015
Short description: | p24@PACS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_PACS1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 18bp_to_ENST00000531597_5end |
EntrezGene: | PACS1 |
HGNC: | 30032 |
UniProt: | E9PSE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.40e-66 | 4 |
hemolymphoid system gland | 2.40e-66 | 4 |
thymic region | 2.40e-66 | 4 |
pharyngeal gland | 2.40e-66 | 4 |
thymus primordium | 2.40e-66 | 4 |
pharyngeal epithelium | 9.76e-45 | 6 |
hemopoietic organ | 1.49e-38 | 7 |
immune organ | 1.49e-38 | 7 |
neck | 2.08e-27 | 10 |
gland of gut | 2.08e-27 | 10 |
chordate pharynx | 2.08e-27 | 10 |
pharyngeal region of foregut | 2.08e-27 | 10 |
pharynx | 4.86e-25 | 11 |
entire pharyngeal arch endoderm | 4.86e-25 | 11 |
early pharyngeal endoderm | 4.86e-25 | 11 |
pharyngeal arch system | 8.40e-16 | 18 |
upper respiratory tract | 4.91e-15 | 19 |
respiratory system epithelium | 1.40e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 2.96e-10 | 29 |
endocrine gland | 1.09e-08 | 35 |
endocrine system | 5.42e-07 | 45 |
segment of respiratory tract | 9.72e-07 | 47 |