FFCP PHASE1:Hg19::chr5:10258215..10258240,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22948 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1618 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=217bp_to_ENST00000514674_5end | |||
|cluster_id=chr5:10258215..10258240,+ | |||
|description=CAGE_peak_5_at_CCT5_5end | |||
|id=chr5:10258215..10258240,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.24e-09!679;CL:0000004!3.24e-09!679;CL:0000255!3.24e-09!679;CL:0000012!5.22e-09!682;CL:0000066!9.04e-08!254;CL:0000063!6.52e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000077;8.65e-07;19 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.85e-10;29 | |||
|ontology_enrichment_disease=DOID:14566!2.80e-25!239;DOID:162!3.58e-25!235;DOID:0050687!5.08e-15!143;DOID:305!4.32e-14!106;DOID:0050686!5.88e-09!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.20e-17,239;DOID:162,1.91e-17,235;DOID:305,1.56e-10,106;DOID:0050687,2.37e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.85e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.15e-20;9!UBERON:0001557;2.15e-20;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.34e-20,9;UBERON:0001557,1.88e-08,19;UBERON:0008947,7.77e-07,38;UBERON:0003258,7.77e-07,38 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0.527533956456907,0.123766352960047,0.331397375727916,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0.572471974262113,0.821246550437305,0.627713197974014,0.61130724598361,0.410502947249729,0.393553906568396,0,0,0.154816123316076,0.919421224478927,0,0,0.0774672005803016,0.142169232487422,0,0,0.601633342410425,0,0,0.32389366601898,0,1.01778767145695,0.377875943688809,0.727752183563449,1.85943229524548,0.411167888021826,0.619412741790207,0.863077176966451,0.512321413058201,0.709446689665756,0.689491361473237,0.645484683583826,0,1.69418105588344,1.09162460023138,0.674170453335254,0.612167784741805,0.641858054152187,0.639337125799041,0.329851300186716,0.199463657621632,0,0.870627715885752,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,1.21079900526674,0.368277635987565,0.949387162322653,0.211255286311942,0.212604299965044,0.419317291016752,0,0.150176892841506,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0,0,0,0,0.722878304769133,0,0.289693037921647,0,0,0.0945348171640679,0.665188192387692,0.351339142772504,0,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0.238490624305342,0,0,0,0,0.347140501607594,0,0,1.6507082516404,0.626984899610432,0.258416759169329,0,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.267899184852239,0.22452937262617,0.225222960966644,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,0,0.25326102332916,0.397227542439656,0.286836620748814,0.354668382198357,1.12135520028461,0,0,0,0.808264032418128,1.30769522490767,0,0,0,0,0,0.597794722207204,1.40921398372518,0.647491777472526,0.842704840213491,0,0.859840221182376,0.206651562351531,0,0.741800787835671,0,0,0,0.625592599359821,0,0.438977620880838,0.919463387397059,0.45071417671979,0.794025282120147,1.07633781413317,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.292311015483596,0.757301322732344,0.184099797284599,0.323292113637624,0.355009592516614,0.705264687593482,0.169560592310488,0.193260853163297,0.272746120590835,0,0.975789649036763,1.45782745153634,1.16193942869518,0.932949495138334,1.51392510525377,1.45990943630332,0,1.28648187638577,0,0,0,3.31259040111563,4.72037132218685,4.33819853790268,3.41911315470421,5.01122721412534,2.13543557199987,4.31460186112526,3.72820783738158,3.8474715694639,0,0,0,0,0,0.982827216677626,0.590789906681404,0.882926198829301,0.860919069801795,0.343135620597051,0.329250856225877,0,0.502644862058154,0.185176890317059,0.325808305310325,0,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0.570762456703795,0.790204397959275,1.71697232418975,0,0,0.445893486866185,0,0.503946384596579,0.141775097242386,0,0,0.766765358330422,0.492663237895943,0,0,0,0,0.380987365753014,0,0,0,1.64523988325318,0.600686115687835,1.14330573052231,0.224262168690721,0,0.51336800074665,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.99972991182057,1.2162378064119,0.502257091432126,0,0.479249710983165,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0.560425719967636,0,0,0.128343036279748,0.508189248444927,0,1.54657762555539,0.167516265334349,0,0,0,0,0,1.50051156317903,0.271265023699736,0.207970861530807,1.24900292158013,0.315404830067869,0.117141414992713,0,0,1.03473071292505,0,0.737476674166813,0.260650843404249,0,0.343143423810856,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,0,2.46735510084249,0.887808626565635,0.328508624055237,0.519254429183621,1.85936605535935,0.241718899183244,0.601519410909855,0.276242966807689,0.459257792658427,0.364182336013434,0.524497659837696,0,0.308061348417659,0,0,0.316654886678627,0,0.510281115829547,1.72732732881711,0,0,0.501689773854853,0,0,0.447749509444357,0.219259876645935,0,0.256450125116389,0,0.650756789328606,0,0.457847324091717,0.165018999841176,0,0,0,0.096670718292122,1.07834031980251,1.99554777143968,0.689182862422653,0.429680979473094,0.290033387828457,1.10794615640931,0.0890320356467374,0.495854746082934,0.384380134730212,0,0.2023155617111,0.929691098594572,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0.539617372749944,1.37268514868027,0.824686816419805,0,0,0.421258456238981,0,0.974853958525138,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0.563391205064483,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0,0,0.349934720244983,0.288666338176536,0.670302275535787,0,0.0941438007767792,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,0.735120647943095,0.371606350251437,0.28853842595289,0.0711418433484141,0.637705090915289,2.19537308576098,0,0.846694330895531,2.27235358192189,0.280797178113459,0.228234679033192,1.25343916618419,0,1.01575066680962,1.76646882614069,1.61439765752838,1.27753871307098,0.687010689511529,0.307240764308458,0.223676107892416,0.333698283423817,2.73543333562856,0.556812347790485,0,1.6227340708559,0.33307196799782,0,0.18714054040822,0.293016358543788,0.242721043499027,0.111443384277478,0.852408440419239,0.23874448473769,0,0.307160702099232,0.994147647766298,0,0.111308705022906,1.31843099381408,0.211125408127993,0.19924798825107,0,0.251932747854276,0,0.246169610922139,0.311039587661807,0.179736702294654,1.25314822272926,0.511572370226872,0.0986434056369336,0,0,0,0.185536196323703,0,1.04171104434093,0,0.724999575434793,2.38966241399549,2.03402920234213,0.236387681767936,0.344743373241465,0.291604613383254,1.38899995946634,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0,0.32681539055697,0.139423744278603,0,0.683652335082007,0.46112780877612,0.269272933229316,0.434589487688032,0.31900115973192,0.183195186803725,0.533034776018635,3.06579894587209,0.31396051279005,0.166211681900156,0.676786981851542,0.784250137270958,0.335643173951685,0.189753732724185,0,2.3209787098083,0.326465616318295,0.424059214301822,0,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.522109747527277,0.067401132980677,0,0,1.094728735294,0,0,0,0,0.30607276163049,0,0.450970258243478,0.518440956986236,0,0.661983911750998,0.313932918407225,1.19472429772959,0.284609546029793,0.138674673013139,1.56203764501618,0.0979923974143777,0.783532859223623,0.17472666824203,0.51595809741485,0.774050650312681,0.730893170861856,2.21711734043665,0.193978032976839,0,0,1.64450309576101,1.39100228192093,0.0633107959558787,0.586654148204409,0.320635281006135,0,3.39676336289621,0.576361668616424,0.114536596165916,0.686379991447858,0.720273989940749,0.372757606696298,0,0.135904206073614,0.313808538937,0.611989305817931,0.288950589901519,0,0.136905378891993,0,1.28929632425987,1.31443677139657,0,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0.360299883542404,0,0.709048640765013,0.824158583811665,0.539228350833479,0.393709926058995,0.423366660328922,0,0,1.44677833618517,1.10031549277787,2.07720169014593,0.2249738915515,0,0.0607495566580247,1.67717343799633,0.0788057072991982,0.104909176269996,0,1.07572403599707,0.191915197319445,0,0,0.5085370753095,2.17199840701485,0,0.653174720218818,0,0.246277562248017,0,0.453248366080503,0.146552233678082,0,0,0,0.342173675768659,0.704815022316672,0,0,0.414239055347196,0,0,0.974340787047167,1.27668251554036,0,0,0,0,0.157054096250234,0,0.610131324509816,0,0.573409195690071,0.221858103073705,0.0620964029413835,0.691743174681154,0.37494122388632,0.303298235083296,0.285465333544967,1.6468607378872,0.468334905806882,0.724605143054126,0.447764408660622,0.467426619694449,0,0.378806010550178,0.251567901752575,0,0.457680136793847,0.151230923763239,0.621748802331122,0.147855149989634,0.318593534327405,0,0.310525913752519,0,0,1.04349012362347,0.300515217994437,0.380805212168795,1.22061219961398,0.545545977607678,0.322231671127465,0.464033759878494,0.796191777397232,0.800055529326307,0.686791410365586,0.336749488765919,0,0.385239660814607,0.214441591374926,1.04397716786085,1.13352962756136,0.926089897295336,2.20263034055821,1.25362188757041,0.617602894321944,0.438568099157414,1.06013487567529,1.15748422962549,1.35153952522458,1.53744911152768,2.07258205038719,0.607719912354764,0.138258436151731,0,0,0,1.63804924423206,3.68659363130579,0.633936370075881,0.79994958341972,0.426766918776564,0.172214979660816,1.13503190713367,0.184105950251841,0,0,0.255788742607303,0.107824811396682,0.157265941855896,0.218419276384028,0.33946505990805,0.425149840203366,0.743614585554013,0.558644917973244,0.636008701306837,0.315446980005013,0,0,0.3062454773532,0.0642292250964595,0,0,0,0.252071696221718,0,0.161475645631851,0,0.294443155503077,0.353909170043221,2.56800037930351,0.577628330751691,0,0,0.198916222116275,0,0.80682027481408,0,0.261906694481422,3.11166643269184,0.147856086217045,0,0,0.413373593002368,0,0,0,0.992422356778588,0.351742488719241,1.02209942111676,0,0.672567444437648,2.42786241694653,0.227662191351298,0.0887023701626388,1.03710588800201,0.171488009437418,0.0679697329768317,0,0.472775363535873,0.111231401892069,0.078493092850514,0,0,0,0.431855182437243,0,0,0.158013611732727,1.04617282831313,0,0,0.414432328326074,0.3414369541879,0,0,0.236664001461131,0.0852134047591577,0,0.22910686854405,0.93061915699296,0,0.335566295393377,0.098150233615243,0.121917924982269,1.29485767437579,0,0,0,1.16969731731053,0.795803100645473,1.78380136166353,0.5647304101948,0.989464650708862,0.150962843566674,0.154348316215889,0.655678681511872,2.82190377816914,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0.509781344063451,0,0.0644578879735772,0.399764623699716,0.178553938605658,1.76447435857846,0.320965466756673,0,0.458729283404541,0.143339583151451,0.631086248772738,0.0679914901909147,0.436350690340377,1.5870805215462,0,0,0.432626562123789,0.504665699340316,0.546327859818478,1.26698501011437,0.203977659483963,0.534434810531121,0.459474497674225,0.50141507858475,0.0757786982182394,0.803892390468535,0,0.310298987585686,0,0,0.193766729508018,0.0620747142958579,0.560659312903067,0.12729431655633,0.202117188958219,0.435433495793923,0.342233301085281,0,0.215166616178029,0.332660356546013,0.244209805832924,1.06727345877715,0,0.179650404213174,2.34640942403454,0.244482888365733,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p5@CCT5 | |||
}} |
Latest revision as of 13:20, 19 September 2015
Short description: | p5@CCT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCT5_5end |
Coexpression cluster: | NA |
Association with transcript: | 217bp_to_ENST00000514674_5end |
EntrezGene: | CCT5 |
HGNC: | 1618 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 2.34e-20 | 9 |
upper respiratory tract | 1.88e-08 | 19 |
respiratory primordium | 7.77e-07 | 38 |
endoderm of foregut | 7.77e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.20e-17 | 239 |
cancer | 1.91e-17 | 235 |
carcinoma | 1.56e-10 | 106 |
cell type cancer | 2.37e-10 | 143 |