FFCP PHASE1:Hg19::chr3:71294213..71294240,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27086 | |EntrezGene=27086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |HGNC=3823 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H334,Q548T7 | |UniProt=Q9H334,Q548T7 | ||
|association_with_transcript=75bp_to_ENST00000498215,NM_001244814,uc003dol.2_5end | |association_with_transcript=75bp_to_ENST00000498215,NM_001244814,uc003dol.2_5end | ||
|cluster_id=chr3:71294213..71294240,- | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_30_at_FOXP1_5end | |description=CAGE_peak_30_at_FOXP1_5end | ||
|id=chr3:71294213..71294240,- | |id=chr3:71294213..71294240,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.94e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.11e-19!115;UBERON:0000481!2.31e-09!347;UBERON:0007100!7.38e-09!27;UBERON:0000059!5.62e-08!11;UBERON:0001155!6.71e-08!9;UBERON:0000477!7.01e-08!286;UBERON:0002616!3.95e-07!59;UBERON:0002791!9.52e-07!33;UBERON:0000948!9.99e-07!24;UBERON:0005498!9.99e-07!24;UBERON:0004140!9.99e-07!24;UBERON:0009881!9.99e-07!24;UBERON:0004141!9.99e-07!24;UBERON:0003084!9.99e-07!24;UBERON:0007005!9.99e-07!24;UBERON:0004139!9.99e-07!24;UBERON:0004291!9.99e-07!24 | |ontology_enrichment_uberon=UBERON:0007023!4.11e-19!115;UBERON:0000481!2.31e-09!347;UBERON:0007100!7.38e-09!27;UBERON:0000059!5.62e-08!11;UBERON:0001155!6.71e-08!9;UBERON:0000477!7.01e-08!286;UBERON:0002616!3.95e-07!59;UBERON:0002791!9.52e-07!33;UBERON:0000948!9.99e-07!24;UBERON:0005498!9.99e-07!24;UBERON:0004140!9.99e-07!24;UBERON:0009881!9.99e-07!24;UBERON:0004141!9.99e-07!24;UBERON:0003084!9.99e-07!24;UBERON:0007005!9.99e-07!24;UBERON:0004139!9.99e-07!24;UBERON:0004291!9.99e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.14e-19;4!UBERON:0002435;1.14e-19;4!UBERON:0000204;1.14e-19;4!UBERON:0005383;1.91e-15;3!UBERON:0005382;1.91e-15;3!UBERON:0009663;2.68e-11;7!UBERON:0000059;3.55e-11;11!UBERON:0001873;8.94e-11;2!UBERON:0005409;1.16e-09;22!UBERON:0000160;2.16e-09;17!UBERON:0001155;5.22e-09;9!UBERON:0002420;8.33e-09;9!UBERON:0000125;8.33e-09;9!UBERON:0007245;8.33e-09;9!UBERON:0002308;8.33e-09;9!UBERON:0010009;8.33e-09;9!UBERON:0010011;8.33e-09;9!UBERON:0000454;8.33e-09;9!UBERON:0007100;1.15e-08;25!UBERON:0004921;1.14e-07;33!UBERON:0004151;2.87e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.06e-19,4;UBERON:0002435,1.06e-19,4;UBERON:0000204,1.06e-19,4;UBERON:0010082,1.06e-19,4;UBERON:0007023,1.30e-15,114;UBERON:0005383,1.53e-15,3;UBERON:0005382,1.53e-15,3;UBERON:0009663,2.57e-11,7;UBERON:0000059,3.30e-11,11;UBERON:0001873,6.67e-11,2;UBERON:0010122,6.67e-11,2;UBERON:0000160,2.00e-09,17;UBERON:0001155,4.91e-09,9;UBERON:0002420,8.09e-09,9;UBERON:0000125,8.09e-09,9;UBERON:0007245,8.09e-09,9;UBERON:0002308,8.09e-09,9;UBERON:0010009,8.09e-09,9;UBERON:0010011,8.09e-09,9;UBERON:0000454,8.09e-09,9;UBERON:0005409,1.89e-08,25;UBERON:0007100,5.19e-08,27;UBERON:0004151,2.49e-07,3 | |||
|phase1_expression=0,0,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,1.34140171940727,0.255725123687061,0.722878304769133,0,0,0,0,0,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,1.05927344650575,0.860509862246441,1.06400514659507,0.560677600142307,0,0,0,0.134710672069688,0.653847612453835,0.302714855289863,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.901428353439581,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.258543431515556,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0,0,0.391602314925481,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.145016693914229,0,0.534192213880424,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.572499546967965,0.372158369359667,0.632758849437452,0.571890581771475,0.255897791311334,0,0.636406495851874,0,0.539617372749944,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0,0,0.545999645631943,0.424216295861138,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0,0.633322905892992,0.329294892959902,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,12.7518712480685,1.10513566212459,0,0,0,0,0,0,0.511572370226872,10.357557591878,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0.347249989866585,2.65722415744152,2.77371808838438,0,0.110579259931225,0,0,0,0,0.692552326534174,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,3.98104772431402,3.80367527364358,7.33236173920351,0,0,0,0,0,0.234264445725339,0,0,0,0.789168805698781,1.20990716048664,0.91821828489147,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,3.006659511141,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,5.27068975226872,0.717873024576814,0.199679000498991,6.43839072204856,1.33902874465124,5.30749432645137,0.360299883542404,0,0.315132729228895,0.0824158583811665,0,0.295282444544246,0,0,0,0.160753148465019,0,0,0,0,0.303747783290123,0,0,0.104909176269996,0,0,0,2.1440859791201,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.533937062838473,0.78602152549833,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0,0.449803112163605,0.155262956876259,0.414706207840855,0.265841714557995,0.521745061811734,0,0,0,0.181848659202559,0,0.928067519756987,0,0,0,0,3.78554694685953,0,1.28664954824955,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,0,0,0,1.90802610392051,0,0,0,0,1.09189682663981,0,0.478901577171454,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0.589848616738702,0,0,0,0,0,1.27857558193737,0,0,0,0,0,0,0,0.620060389503552,0.0634158101939068,1.64092442705466,0,2.48105589194647,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,3.21821680687107,3.14231179832004,0,4.56579360254748,0,0,0.929195074296532,0,0,0,4.00855682365126,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.874238242015829,0,14.9540476269882,0,0,0,0,0.339854229375634,0,0.128915775947154,0,0,0,0,2.19100916473955,0.458729283404541,0.143339583151451,0,0.135982980381829,0.436350690340377,2.645134202577,0,0.462175628631418,0,0,0,0,0,0,0,0,1.81868875723775,0.803892390468535,0,0,0.213233981900981,0.23806443146374,0,0.31037357147929,0,0.12729431655633,1.0105859447911,0,0,0.0673520530145875,0.573777643141411,0.665320713092027,0,0,0,0.0898252021065869,2.34640942403454,1.1001729976458,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,1.34140171940727,0.255725123687061,0.722878304769133,0,0,0,0,0,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,1.05927344650575,0.860509862246441,1.06400514659507,0.560677600142307,0,0,0,0.134710672069688,0.653847612453835,0.302714855289863,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.901428353439581,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.258543431515556,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0,0,0.391602314925481,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.145016693914229,0,0.534192213880424,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.572499546967965,0.372158369359667,0.632758849437452,0.571890581771475,0.255897791311334,0,0.636406495851874,0,0.539617372749944,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0,0,0.545999645631943,0.424216295861138,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0,0.633322905892992,0.329294892959902,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,12.7518712480685,1.10513566212459,0,0,0,0,0,0,0.511572370226872,10.357557591878,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0.347249989866585,2.65722415744152,2.77371808838438,0,0.110579259931225,0,0,0,0,0.692552326534174,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,3.98104772431402,3.80367527364358,7.33236173920351,0,0,0,0,0,0.234264445725339,0,0,0,0.789168805698781,1.20990716048664,0.91821828489147,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,3.006659511141,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,5.27068975226872,0.717873024576814,0.199679000498991,6.43839072204856,1.33902874465124,5.30749432645137,0.360299883542404,0,0.315132729228895,0.0824158583811665,0,0.295282444544246,0,0,0,0.160753148465019,0,0,0,0,0.303747783290123,0,0,0.104909176269996,0,0,0,2.1440859791201,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.533937062838473,0.78602152549833,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0,0.449803112163605,0.155262956876259,0.414706207840855,0.265841714557995,0.521745061811734,0,0,0,0.181848659202559,0,0.928067519756987,0,0,0,0,3.78554694685953,0,1.28664954824955,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,0,0,0,1.90802610392051,0,0,0,0,1.09189682663981,0,0.478901577171454,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0.589848616738702,0,0,0,0,0,1.27857558193737,0,0,0,0,0,0,0,0.620060389503552,0.0634158101939068,1.64092442705466,0,2.48105589194647,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,3.21821680687107,3.14231179832004,0,4.56579360254748,0,0,0.929195074296532,0,0,0,4.00855682365126,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.874238242015829,0,14.9540476269882,0,0,0,0,0.339854229375634,0,0.128915775947154,0,0,0,0,2.19100916473955,0.458729283404541,0.143339583151451,0,0.135982980381829,0.436350690340377,2.645134202577,0,0.462175628631418,0,0,0,0,0,0,0,0,1.81868875723775,0.803892390468535,0,0,0.213233981900981,0.23806443146374,0,0.31037357147929,0,0.12729431655633,1.0105859447911,0,0,0.0673520530145875,0.573777643141411,0.665320713092027,0,0,0,0.0898252021065869,2.34640942403454,1.1001729976458,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p30@FOXP1 | |short_description=p30@FOXP1 | ||
}} | }} |
Latest revision as of 13:28, 19 September 2015
Short description: | p30@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_FOXP1_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 75bp_to_ENST00000498215, NM_001244814, uc003dol.2_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | Q9H334Q548T7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.06e-19 | 4 |
striatum | 1.06e-19 | 4 |
ventral part of telencephalon | 1.06e-19 | 4 |
future corpus striatum | 1.06e-19 | 4 |
adult organism | 1.30e-15 | 114 |
caudate-putamen | 1.53e-15 | 3 |
dorsal striatum | 1.53e-15 | 3 |
telencephalic nucleus | 2.57e-11 | 7 |
large intestine | 3.30e-11 | 11 |
caudate nucleus | 6.67e-11 | 2 |
future caudate nucleus | 6.67e-11 | 2 |
intestine | 2.00e-09 | 17 |
colon | 4.91e-09 | 9 |
basal ganglion | 8.09e-09 | 9 |
neural nucleus | 8.09e-09 | 9 |
nuclear complex of neuraxis | 8.09e-09 | 9 |
nucleus of brain | 8.09e-09 | 9 |
aggregate regional part of brain | 8.09e-09 | 9 |
collection of basal ganglia | 8.09e-09 | 9 |
cerebral subcortex | 8.09e-09 | 9 |
gastrointestinal system | 1.89e-08 | 25 |
primary circulatory organ | 5.19e-08 | 27 |
cardiac chamber | 2.49e-07 | 3 |