FFCP PHASE1:Hg19::chr1:19811996..19812048,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:19811996..19812048,-
|short_description=p1@CAPZB
|description=CAGE_peak_1_at_CAPZB_5end
|association_with_transcript=0bp_to_ENST00000264203,ENST00000459967...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=832 | |EntrezGene=832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1491 | |HGNC=1491 | ||
|TSSclassifier=strong | |||
|UniProt=B1AK85 | |UniProt=B1AK85 | ||
|association_with_transcript=0bp_to_ENST00000264203,ENST00000459967_5end | |||
|cluster_id=chr1:19811996..19812048,- | |||
|description=CAGE_peak_1_at_CAPZB_5end | |||
|id=chr1:19811996..19812048,- | |||
|ontology_enrichment_celltype=CL:0002371!1.17e-42!591;CL:0000144!1.77e-40!625;CL:0000055!4.61e-29!180;CL:0000548!5.27e-28!679;CL:0000004!5.27e-28!679;CL:0000255!5.27e-28!679;CL:0000012!8.16e-27!682;CL:0000048!9.52e-27!430;CL:0000723!2.62e-26!436;CL:0000034!2.66e-26!444;CL:0000003!3.63e-25!722;CL:0000183!3.22e-22!59;CL:0000680!6.15e-20!57;CL:0000056!6.15e-20!57;CL:0000355!6.15e-20!57;CL:0000187!1.90e-19!54;CL:0000192!7.31e-18!42;CL:0000514!7.31e-18!42;CL:0000393!9.89e-18!60;CL:0000211!9.89e-18!60;CL:0000222!1.04e-17!119;CL:0000057!2.86e-15!75;CL:0000359!4.63e-14!32;CL:0002320!1.23e-13!365;CL:0000134!1.74e-11!358;CL:0002321!3.56e-11!248;CL:0000220!8.13e-11!246;CL:0000219!2.28e-09!390;CL:0000063!1.24e-08!578;CL:1000449!9.79e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.72e-13;32!CL:0000192;4.00e-13;43!CL:0000187;2.82e-11;55!CL:0000393;1.23e-09;61!CL:0000211;1.23e-09;61!CL:0000134;1.96e-07;55!CL:0000057;7.73e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,5.70e-28,427;CL:0000723,1.62e-27,433;CL:0000034,1.68e-27,441;CL:0000680,3.59e-20,58;CL:0000056,3.59e-20,58;CL:0000355,3.59e-20,58;CL:0000187,1.12e-19,55;CL:0000222,2.94e-18,121;CL:0000192,4.47e-18,43;CL:0000514,4.47e-18,43;CL:0000393,5.70e-18,61;CL:0000211,5.70e-18,61;CL:0000057,2.06e-15,76;CL:0002320,2.57e-14,361;CL:0000359,4.63e-14,32;CL:0000134,4.18e-12,354;CL:0002321,1.38e-11,250;CL:0000219,6.72e-10,386 | |||
|ontology_enrichment_development_v019=CL:0000514;4.00e-13;43!CL:0000355;6.83e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.50e-23!83;UBERON:0002329!7.50e-23!83;UBERON:0003077!7.50e-23!83;UBERON:0003059!7.50e-23!83;UBERON:0007282!7.50e-23!83;UBERON:0009618!7.50e-23!83;UBERON:0007285!7.50e-23!83;UBERON:0004290!8.75e-21!70;UBERON:0000486!1.85e-20!82;UBERON:0005256!1.41e-18!143;UBERON:0001134!1.29e-17!61;UBERON:0002036!1.29e-17!61;UBERON:0003082!1.29e-17!61;UBERON:0002385!2.53e-17!63;UBERON:0001015!2.53e-17!63;UBERON:0000383!2.53e-17!63;UBERON:0004535!4.86e-15!110;UBERON:0001009!2.72e-14!113;UBERON:0002049!5.33e-13!79;UBERON:0007798!5.33e-13!79;UBERON:0002384!1.46e-12!375;UBERON:0004872!2.08e-12!84;UBERON:0001637!5.60e-12!42;UBERON:0003509!5.60e-12!42;UBERON:0004572!5.60e-12!42;UBERON:0003914!1.06e-11!118;UBERON:0003081!1.16e-11!216;UBERON:0002204!1.22e-11!167;UBERON:0001981!2.93e-10!60;UBERON:0007500!2.93e-10!60;UBERON:0004537!2.93e-10!60;UBERON:0006965!2.93e-10!60;UBERON:0000055!1.64e-09!69;UBERON:0004573!1.87e-09!33;UBERON:0004571!1.87e-09!33;UBERON:0000490!2.15e-09!138;UBERON:0000926!2.39e-08!448;UBERON:0004120!2.39e-08!448;UBERON:0006603!2.39e-08!448;UBERON:0002100!9.42e-08!216;UBERON:0004211!9.79e-07!16;UBERON:0001285!9.79e-07!16;UBERON:0007684!9.79e-07!16;UBERON:0003220!9.79e-07!16;UBERON:0004208!9.79e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.94e-08;33!UBERON:0004571;1.94e-08;33!UBERON:0001637;3.20e-08;42!UBERON:0003509;3.20e-08;42!UBERON:0004572;3.20e-08;42!UBERON:0003914;2.11e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.06e-24,78;UBERON:0002329,4.98e-21,71;UBERON:0003059,4.98e-21,71;UBERON:0007282,4.98e-21,71;UBERON:0004290,4.98e-21,71;UBERON:0009618,4.98e-21,71;UBERON:0000486,1.04e-20,83;UBERON:0003077,1.57e-20,72;UBERON:0007285,1.57e-20,72;UBERON:0007524,2.58e-20,73;UBERON:0000926,3.69e-18,315;UBERON:0004120,3.69e-18,315;UBERON:0006603,3.69e-18,315;UBERON:0001134,7.41e-18,62;UBERON:0002036,7.41e-18,62;UBERON:0003082,7.41e-18,62;UBERON:0002385,1.45e-17,64;UBERON:0001015,1.45e-17,64;UBERON:0000383,1.45e-17,64;UBERON:0004535,6.89e-15,109;UBERON:0001009,3.85e-14,112;UBERON:0005256,5.13e-14,122;UBERON:0002204,6.43e-14,167;UBERON:0002384,3.33e-13,371;UBERON:0002049,7.42e-13,78;UBERON:0007798,7.42e-13,78;UBERON:0003104,1.60e-12,160;UBERON:0009142,1.60e-12,160;UBERON:0004872,2.90e-12,83;UBERON:0001637,5.60e-12,42;UBERON:0003509,5.60e-12,42;UBERON:0004572,5.60e-12,42;UBERON:0000490,6.95e-12,148;UBERON:0003914,1.73e-11,117;UBERON:0003081,1.51e-10,203;UBERON:0007500,4.02e-10,59;UBERON:0001981,4.02e-10,59;UBERON:0004537,4.02e-10,59;UBERON:0006965,4.02e-10,59;UBERON:0004573,1.87e-09,33;UBERON:0004571,1.87e-09,33;UBERON:0000055,2.25e-09,68;UBERON:0002100,9.75e-07,199 | |||
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| ||
|short_description=p1@CAPZB | |||
}} | }} |
Latest revision as of 13:51, 19 September 2015
Short description: | p1@CAPZB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAPZB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264203, ENST00000459967_5end |
EntrezGene: | CAPZB |
HGNC: | 1491 |
UniProt: | B1AK85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 5.70e-28 | 427 |
somatic stem cell | 1.62e-27 | 433 |
stem cell | 1.68e-27 | 441 |
muscle precursor cell | 3.59e-20 | 58 |
myoblast | 3.59e-20 | 58 |
multi-potent skeletal muscle stem cell | 3.59e-20 | 58 |
muscle cell | 1.12e-19 | 55 |
mesodermal cell | 2.94e-18 | 121 |
smooth muscle cell | 4.47e-18 | 43 |
smooth muscle myoblast | 4.47e-18 | 43 |
electrically responsive cell | 5.70e-18 | 61 |
electrically active cell | 5.70e-18 | 61 |
fibroblast | 2.06e-15 | 76 |
connective tissue cell | 2.57e-14 | 361 |
vascular associated smooth muscle cell | 4.63e-14 | 32 |
mesenchymal cell | 4.18e-12 | 354 |
embryonic cell | 1.38e-11 | 250 |
motile cell | 6.72e-10 | 386 |