FFCP PHASE2:Hg19::chr2:202563414..202563426,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:58538 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:13680 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=58538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=13680 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8WC25,F8WDZ0,C9K002,Q96JB8 | ||
|association_with_transcript=0bp_to_ENST00000315506,ENST00000315549,ENST00000359962,ENST00000374605,ENST00000409474,NM_033066,uc002uyk.3,uc002uyl.3,uc002uym.1,uc002uyn.2,uc010ftk.2_5end | |association_with_transcript=0bp_to_ENST00000315506,ENST00000315549,ENST00000359962,ENST00000374605,ENST00000409474,NM_033066,uc002uyk.3,uc002uyl.3,uc002uym.1,uc002uyn.2,uc010ftk.2_5end | ||
|cluster_id=chr2:202563414..202563426,- | |cluster_id=chr2:202563414..202563426,- | ||
Latest revision as of 13:56, 19 September 2015
| Short description: | p6@MPP4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_MPP4_5end |
| Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
| Association with transcript: | 0bp_to_ENST00000315506, ENST00000315549, ENST00000359962, ENST00000374605, ENST00000409474, NM_033066, uc002uyk.3, uc002uyl.3, uc002uym.1, uc002uyn.2, uc010ftk.2_5end |
| EntrezGene: | MPP4 |
| HGNC: | 13680 |
| UniProt: | F8WC25F8WDZ0C9K002Q96JB8 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p6@MPP4 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| vascular associated smooth muscle cell | 2.69e-15 | 32 |
| smooth muscle cell of the pulmonary artery | 8.64e-12 | 1 |
| smooth muscle cell | 3.21e-11 | 43 |
| smooth muscle myoblast | 3.21e-11 | 43 |
| muscle precursor cell | 1.32e-10 | 58 |
| myoblast | 1.32e-10 | 58 |
| multi-potent skeletal muscle stem cell | 1.32e-10 | 58 |
| aortic smooth muscle cell | 5.28e-10 | 10 |
| mesodermal cell | 7.63e-09 | 121 |
| muscle cell | 1.26e-08 | 55 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| artery | 6.03e-15 | 42 |
| arterial blood vessel | 6.03e-15 | 42 |
| arterial system | 6.03e-15 | 42 |
| vessel | 6.20e-14 | 68 |
| epithelial tube open at both ends | 3.45e-13 | 59 |
| blood vessel | 3.45e-13 | 59 |
| blood vasculature | 3.45e-13 | 59 |
| vascular cord | 3.45e-13 | 59 |
| vasculature | 5.67e-12 | 78 |
| vascular system | 5.67e-12 | 78 |
Showing 1 to 10 of 40 entries
