FFCP PHASE1:Hg19::chr7:7606497..7606595,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:7606497..7606595,+
|short_description=p1@MIOS
|description=CAGE_peak_1_at_MIOS_5end
|association_with_transcript=0bp_to_ENST00000340080,ENST00000405785,ENS...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54468 | |EntrezGene=54468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21905 | |HGNC=21905 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXC5,C9JTV2 | |UniProt=Q9NXC5,C9JTV2 | ||
|association_with_transcript=0bp_to_ENST00000340080,ENST00000405785,ENST00000433635_5end | |||
|cluster_id=chr7:7606497..7606595,+ | |||
|description=CAGE_peak_1_at_MIOS_5end | |||
|id=chr7:7606497..7606595,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.26e-30!119;CL:0002031!2.20e-28!124;CL:0000738!7.63e-28!140;CL:0000037!1.86e-22!172;CL:0000566!1.86e-22!172;CL:0002032!1.77e-20!165;CL:0000837!1.77e-20!165;CL:0002057!3.50e-19!42;CL:0000988!1.87e-17!182;CL:0000860!3.76e-16!45;CL:0002009!3.21e-15!65;CL:0000542!5.55e-15!53;CL:0000051!5.55e-15!53;CL:0000838!1.54e-14!52;CL:0002194!2.35e-14!63;CL:0000576!2.35e-14!63;CL:0000040!2.35e-14!63;CL:0000559!2.35e-14!63;CL:0000557!3.26e-14!71;CL:0000839!3.90e-13!70;CL:0000766!5.80e-12!76;CL:0000945!1.20e-09!24;CL:0000826!1.20e-09!24;CL:0000763!6.73e-08!112;CL:0000049!6.73e-08!112;CL:0000236!9.56e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.51e-14;33!CL:0002057;4.51e-14;33!CL:0000473;3.96e-13;39!CL:0000234;3.96e-13;39!CL:0000576;1.54e-11;48!CL:0002087;7.87e-11;104!CL:0000945;1.77e-09;24!CL:0000542;6.41e-09;53!CL:0000766;2.33e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.05e-33,115;CL:0002031,3.13e-31,120;CL:0000738,1.88e-30,136;CL:0000037,1.86e-24,168;CL:0002032,2.05e-22,161;CL:0000837,2.05e-22,161;CL:0000473,9.79e-21,48;CL:0000234,9.79e-21,48;CL:0000988,1.08e-19,177;CL:0000860,3.50e-19,42;CL:0002057,3.50e-19,42;CL:0002009,4.10e-18,61;CL:0002194,3.40e-17,59;CL:0000576,3.40e-17,59;CL:0000040,3.40e-17,59;CL:0000559,3.40e-17,59;CL:0000557,8.25e-17,67;CL:0000839,1.28e-15,66;CL:0000542,5.55e-15,53;CL:0000051,5.55e-15,53;CL:0000838,1.54e-14,52;CL:0000766,3.56e-14,72;CL:0000945,1.20e-09,24;CL:0000826,1.20e-09,24;CL:0000763,3.28e-09,108;CL:0000049,3.28e-09,108;CL:0000236,9.56e-07,14;CL:0002320,9.70e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.33e-14;42!CL:0000051;6.41e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.66e-17!102;UBERON:0003061!6.66e-17!102;UBERON:0002371!7.31e-17!80;UBERON:0001474!6.18e-16!86;UBERON:0004765!2.24e-15!101;UBERON:0001434!2.24e-15!101;UBERON:0002193!6.62e-13!112;UBERON:0002405!1.94e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;8.49e-07;16!UBERON:0002036;8.49e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.49e-19,76;UBERON:0002390,3.37e-19,98;UBERON:0003061,3.37e-19,98;UBERON:0004765,5.11e-19,90;UBERON:0001474,2.11e-18,82;UBERON:0001434,3.98e-18,100;UBERON:0002405,1.30e-15,93;UBERON:0002193,1.05e-14,108;UBERON:0002204,2.18e-07,167 | |||
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| ||
|short_description=p1@MIOS | |||
}} | }} |
Latest revision as of 14:00, 19 September 2015
Short description: | p1@MIOS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIOS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000340080, ENST00000405785, ENST00000433635_5end |
EntrezGene: | MIOS |
HGNC: | 21905 |
UniProt: | Q9NXC5C9JTV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.05e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 3.13e-31 | 120 |
leukocyte | 1.88e-30 | 136 |
hematopoietic stem cell | 1.86e-24 | 168 |
hematopoietic oligopotent progenitor cell | 2.05e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-22 | 161 |
defensive cell | 9.79e-21 | 48 |
phagocyte | 9.79e-21 | 48 |
hematopoietic cell | 1.08e-19 | 177 |
classical monocyte | 3.50e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.50e-19 | 42 |
macrophage dendritic cell progenitor | 4.10e-18 | 61 |
monopoietic cell | 3.40e-17 | 59 |
monocyte | 3.40e-17 | 59 |
monoblast | 3.40e-17 | 59 |
promonocyte | 3.40e-17 | 59 |
granulocyte monocyte progenitor cell | 8.25e-17 | 67 |
myeloid lineage restricted progenitor cell | 1.28e-15 | 66 |
lymphocyte | 5.55e-15 | 53 |
common lymphoid progenitor | 5.55e-15 | 53 |
lymphoid lineage restricted progenitor cell | 1.54e-14 | 52 |
myeloid leukocyte | 3.56e-14 | 72 |
lymphocyte of B lineage | 1.20e-09 | 24 |
pro-B cell | 1.20e-09 | 24 |
myeloid cell | 3.28e-09 | 108 |
common myeloid progenitor | 3.28e-09 | 108 |
B cell | 9.56e-07 | 14 |
connective tissue cell | 9.70e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.49e-19 | 76 |
hematopoietic system | 3.37e-19 | 98 |
blood island | 3.37e-19 | 98 |
skeletal element | 5.11e-19 | 90 |
bone element | 2.11e-18 | 82 |
skeletal system | 3.98e-18 | 100 |
immune system | 1.30e-15 | 93 |
hemolymphoid system | 1.05e-14 | 108 |
musculoskeletal system | 2.18e-07 | 167 |