FFCP PHASE1:Hg19::chr14:24702023..24702035,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=4738 | |EntrezGene=4738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7732 | |HGNC=7732 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q15843 | |UniProt=Q15843 | ||
|association_with_transcript=-363bp_to_ENST00000250495_5end | |association_with_transcript=-363bp_to_ENST00000250495_5end | ||
|cluster_id=chr14:24702023..24702035,- | |||
|description=CAGE_peak_5_at_NEDD8_5end | |description=CAGE_peak_5_at_NEDD8_5end | ||
|id=chr14:24702023..24702035,- | |id=chr14:24702023..24702035,- | ||
Latest revision as of 14:01, 19 September 2015
| Short description: | p5@NEDD8 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_NEDD8_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -363bp_to_ENST00000250495_5end |
| EntrezGene: | NEDD8 |
| HGNC: | 7732 |
| UniProt: | Q15843 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@NEDD8 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 3.63e-17 | 12 |
| eosinophil | 1.65e-12 | 2 |
| endothelial cell of sinusoid | 2.32e-12 | 2 |
| endothelial cell of hepatic sinusoid | 2.32e-12 | 2 |
| blood cell | 5.64e-09 | 11 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| hepatic sinusoid | 2.32e-12 | 2 |
| abdomen blood vessel | 2.32e-12 | 2 |
| sinusoid | 2.32e-12 | 2 |
| abdominal segment blood vessel | 2.32e-12 | 2 |
| testis | 3.74e-12 | 8 |
| liver | 4.22e-11 | 19 |
| digestive gland | 4.22e-11 | 19 |
| liver bud | 4.22e-11 | 19 |
| hepatic diverticulum | 1.12e-09 | 22 |
| liver primordium | 1.12e-09 | 22 |
Showing 1 to 10 of 27 entries
