FFCP PHASE1:Hg19::chr12:57869624..57869640,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64333 | |EntrezGene=64333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14130 | |HGNC=14130 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-430bp_to_ENST00000550440_5end | |association_with_transcript=-430bp_to_ENST00000550440_5end | ||
|cluster_id=chr12:57869624..57869640,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_13_at_ARHGAP9_5end | |description=CAGE_peak_13_at_ARHGAP9_5end | ||
|id=chr12:57869624..57869640,- | |id=chr12:57869624..57869640,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.27e-34!69;UBERON:0006238!1.27e-34!69;UBERON:0002616!1.17e-33!59;UBERON:0005743!4.43e-33!86;UBERON:0000073!2.09e-32!94;UBERON:0001016!2.09e-32!94;UBERON:0001049!3.22e-31!57;UBERON:0005068!3.22e-31!57;UBERON:0006241!3.22e-31!57;UBERON:0007135!3.22e-31!57;UBERON:0001017!1.31e-28!82;UBERON:0007023!8.19e-27!115;UBERON:0004733!5.90e-25!12;UBERON:0002028!5.90e-25!12;UBERON:0007277!5.90e-25!12;UBERON:0003075!1.13e-24!86;UBERON:0007284!1.13e-24!86;UBERON:0002346!2.08e-23!90;UBERON:0004732!5.64e-23!13;UBERON:0000033!6.18e-22!123;UBERON:0000153!1.01e-20!129;UBERON:0007811!1.01e-20!129;UBERON:0003076!8.35e-20!15;UBERON:0003057!8.35e-20!15;UBERON:0000988!1.66e-19!3;UBERON:0002020!1.91e-19!34;UBERON:0003528!1.91e-19!34;UBERON:0002298!2.31e-19!8;UBERON:0001950!5.20e-18!20;UBERON:0002680!1.34e-17!9;UBERON:0001895!1.34e-17!9;UBERON:0010092!1.34e-17!9;UBERON:0001869!3.41e-17!32;UBERON:0002619!2.40e-16!22;UBERON:0004121!3.25e-16!169;UBERON:0001893!4.10e-16!34;UBERON:0002780!6.04e-16!41;UBERON:0001890!6.04e-16!41;UBERON:0006240!6.04e-16!41;UBERON:0000924!9.75e-16!173;UBERON:0006601!9.75e-16!173;UBERON:0003080!1.58e-15!42;UBERON:0003056!1.88e-14!61;UBERON:0000956!2.51e-14!25;UBERON:0000203!2.51e-14!25;UBERON:0002791!2.02e-13!33;UBERON:0002148!3.07e-13!2;UBERON:0009662!3.07e-13!2;UBERON:0001872!4.33e-12!5;UBERON:0001896!3.54e-09!3;UBERON:0005290!3.54e-09!3;UBERON:0010096!3.54e-09!3;UBERON:0006331!4.01e-09!3;UBERON:0002902!7.26e-08!1;UBERON:0009899!7.26e-08!1;UBERON:0007190!1.01e-07!1;UBERON:0002581!1.80e-07!1;UBERON:0001882!2.98e-07!1;UBERON:0005403!2.98e-07!1;UBERON:0002022!3.17e-07!1;UBERON:0000025!9.88e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000988;1.12e-17;3!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0002298;1.57e-09;6!UBERON:0002680;8.85e-07;9!UBERON:0001895;8.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000988,1.12e-17,3;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0002298,1.57e-09,6;UBERON:0002680,8.85e-07,9;UBERON:0001895,8.85e-07,9;UBERON:0010092,8.85e-07,9 | |||
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|short_description=p13@ARHGAP9 | |short_description=p13@ARHGAP9 | ||
}} | }} |
Latest revision as of 14:27, 19 September 2015
Short description: | p13@ARHGAP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ARHGAP9_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -430bp_to_ENST00000550440_5end |
EntrezGene: | ARHGAP9 |
HGNC: | 14130 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
pons | 1.12e-17 | 3 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
brainstem | 1.57e-09 | 6 |
regional part of metencephalon | 8.85e-07 | 9 |
metencephalon | 8.85e-07 | 9 |
future metencephalon | 8.85e-07 | 9 |