FFCP PHASE1:Hg19::chr12:57873631..57873672,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:57873631..57873672,-
|short_description=p4@ARHGAP9
|description=CAGE_peak_4_at_ARHGAP9_5end
|association_with_transcript=0bp_to_ENST00000356411,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64333 | |EntrezGene=64333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14130 | |HGNC=14130 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRR9,E9PD79,F8VSD0 | |UniProt=Q9BRR9,E9PD79,F8VSD0 | ||
|association_with_transcript=0bp_to_ENST00000356411,ENST00000393791,ENST00000423291,ENST00000552249,NM_032496,uc001soc.2,uc010sro.1_5end | |||
|cluster_id=chr12:57873631..57873672,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_4_at_ARHGAP9_5end | |||
|id=chr12:57873631..57873672,- | |||
|ontology_enrichment_celltype=CL:0000738!3.17e-66!140;CL:0000037!2.17e-60!172;CL:0000566!2.17e-60!172;CL:0000988!8.71e-55!182;CL:0002032!3.96e-54!165;CL:0000837!3.96e-54!165;CL:0002031!4.32e-53!124;CL:0002087!5.07e-52!119;CL:0000542!3.84e-34!53;CL:0000051!3.84e-34!53;CL:0000838!1.53e-33!52;CL:0000766!3.46e-24!76;CL:0002057!3.95e-24!42;CL:0000860!1.23e-21!45;CL:0000763!1.67e-21!112;CL:0000049!1.67e-21!112;CL:0000557!7.61e-21!71;CL:0000791!8.35e-20!18;CL:0000789!8.35e-20!18;CL:0002420!8.35e-20!18;CL:0002419!8.35e-20!18;CL:0000790!8.35e-20!18;CL:0000839!4.42e-19!70;CL:0002009!4.07e-17!65;CL:0002194!3.53e-16!63;CL:0000576!3.53e-16!63;CL:0000040!3.53e-16!63;CL:0000559!3.53e-16!63;CL:0000945!4.49e-16!24;CL:0000826!4.49e-16!24;CL:0000084!2.99e-15!25;CL:0000827!2.99e-15!25;CL:0000625!3.14e-12!11;CL:0000236!1.01e-11!14;CL:0000134!2.08e-11!358;CL:0002320!1.39e-10!365;CL:0000624!1.20e-08!6;CL:0000219!8.41e-08!390;CL:0000094!5.08e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.96e-29;18!CL:0000789;6.96e-29;18!CL:0002419;6.96e-29;18!CL:0000542;5.54e-23;53!CL:0000084;3.51e-21;25!CL:0000625;1.82e-17;11!CL:0000945;1.54e-16;24!CL:0000236;5.19e-16;13!CL:0002087;4.56e-15;104!CL:0000624;3.87e-12;6!CL:0000094;5.50e-10;8!CL:0000738;2.33e-09;136!CL:0000860;5.03e-09;33!CL:0002057;5.03e-09;33!CL:0000988;1.53e-08;177!CL:0000766;1.90e-07;69!CL:0000576;4.23e-07;48!CL:0000081;6.79e-07;11!CL:0000898;8.10e-07;3!CL:0000623;9.37e-07;3!CL:0000473;9.79e-07;39!CL:0000234;9.79e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.56e-53,136;CL:0000037,2.63e-47,168;CL:0002087,1.18e-44,115;CL:0000988,1.14e-43,177;CL:0002031,2.53e-41,120;CL:0000838,2.78e-41,52;CL:0002032,3.37e-41,161;CL:0000837,3.37e-41,161;CL:0000542,2.99e-40,53;CL:0000051,2.99e-40,53;CL:0000791,7.98e-29,18;CL:0000789,7.98e-29,18;CL:0002420,7.98e-29,18;CL:0002419,7.98e-29,18;CL:0000790,7.98e-29,18;CL:0000084,3.62e-21,25;CL:0000827,3.62e-21,25;CL:0000625,1.73e-17,11;CL:0000236,5.31e-17,14;CL:0000945,1.89e-16,24;CL:0000826,1.89e-16,24;CL:0000766,1.59e-14,72;CL:0000624,3.85e-12,6;CL:0000134,1.60e-10,354;CL:0000763,2.62e-10,108;CL:0000049,2.62e-10,108;CL:0000860,4.38e-10,42;CL:0002057,4.38e-10,42;CL:0000094,5.52e-10,8;CL:0002320,6.30e-10,361;CL:0000557,2.21e-09,67;CL:0000839,1.01e-08,66;CL:0000473,3.56e-08,48;CL:0000234,3.56e-08,48;CL:0000219,7.12e-08,386;CL:0002194,8.54e-08,59;CL:0000576,8.54e-08,59;CL:0000040,8.54e-08,59;CL:0000559,8.54e-08,59;CL:0002009,2.31e-07,61;CL:0000081,6.81e-07,11;CL:0000898,8.11e-07,3;CL:0000623,9.22e-07,3;CL:0000825,9.22e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.96e-29;18!CL:0000051;5.54e-23;53!CL:0002057;1.79e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.33e-27!102;UBERON:0003061!1.33e-27!102;UBERON:0002193!2.22e-25!112;UBERON:0002371!8.00e-18!80;UBERON:0001474!1.75e-15!86;UBERON:0002405!4.15e-14!115;UBERON:0004765!1.49e-11!101;UBERON:0001434!1.49e-11!101;UBERON:0002384!8.26e-10!375;UBERON:0007023!4.80e-09!115;UBERON:0000178!1.97e-07!15;UBERON:0000179!1.97e-07!15;UBERON:0000463!1.97e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.15e-11;15!UBERON:0000179;4.15e-11;15!UBERON:0000463;4.15e-11;15!UBERON:0002390;1.23e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.59e-19,98;UBERON:0003061,1.59e-19,98;UBERON:0002193,1.05e-18,108;UBERON:0002405,1.93e-11,93;UBERON:0000178,3.82e-11,15;UBERON:0000179,3.82e-11,15;UBERON:0000463,3.82e-11,15;UBERON:0002384,4.01e-09,371;UBERON:0002371,2.59e-08,76;UBERON:0004177,1.82e-07,7;UBERON:0005057,1.82e-07,7;UBERON:0001474,3.20e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,1.47781061009902,1.10195093839151,12.9810211360138,31.0901812458742,8.3600706590681,0,0,0,1.23947520928483,0.568676929949686,5.5784083473621,4.9859586767869,10.6288557159175,11.718587018656,0.447830948479849,1.94336199611388,1.28787783817093,0.290796477559129,0.755751887377619,1.21292030593908,0.697287110717054,1.23350366406548,1.54853185447552,1.43846196161075,1.7931249457037,2.12834006899727,2.06847408441971,2.5819387343353,4.06279459783025,1.50593871634084,0.545812300115692,0.674170453335254,0.306083892370903,0.962787081228281,4.47535988059329,0.989553900560148,0.398927315243264,0.852449501065388,1.7412554317715,0.56738522469114,0,3.01498398308092,3.12889751052121,4.56096573880745,1.81619850790011,2.20966581592539,0.949387162322653,0.211255286311942,0.425208599930087,0,0.673971786878971,0.300353785683013,1.92870704036496,0,0.19891667719909,0.365328307529268,5.27988733383968,6.00752472388345,3.55803701545422,1.28019066769952,2.80277190925209,5.74752439954483,5.94940385506376,6.67837628174755,15.9379631350646,14.6809297342735,10.3213771593812,6.60856642895129,17.3757654524276,2.37045676297569,47.0136350572061,49.1263453436456,43.998720785895,11.8702411727381,37.8069829294965,34.0882420129008,35.068811113424,27.5183828506379,34.4688911745559,29.9070757687889,44.4118336574626,26.3868118634891,29.3934125485325,9.53739846701322,13.5411508715066,7.24507714337631,34.8473423430842,27.5567052932404,19.8617495229456,10.6510782135712,43.687136270619,37.111764112124,36.4348356508084,6.68987370080603,5.20866763085135,5.70271226669025,3.61380285786655,3.71161172347813,11.2437653897111,8.05042656949657,4.92676798152628,32.4586856591819,30.4881823193198,36.2061009706997,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.851363990735132,0,0,0,0,0,2.14641561874808,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29755719297581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89728533054321,0.616339038092582,0.829312462163088,1.00883967391873,1.76739406796932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,32.9041369537218,35.7941774266799,39.1446260653233,0,0,0,0,0,5.24304916763028,0,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68425709716127,20.7085632785872,10.3525731069341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,4.58782324285425,3.41788312304498,6.67048971281809,3.29089818468955,3.8908398671563,4.86028293514303,5.55187623405989,0,0,0,0.743212700502875,0,0.853702120180969,1.59426272728822,2.19537308576098,2.10655907145603,5.08016598537319,0,1.68478306868075,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,1.19548792950642,10.4987887901836,0,0,1.6001024709939,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0,0,0,2.37191225980366,0,0,0.394584402849391,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0.77380195455795,0.121499113316049,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,1.06787412567695,0,1.65695622138878,2.97699613087171,0,3.16660755790329,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,1.26757386311357,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.218559560503957,0,0,0,0,0.594092800654172,0,0,6.86082601252931,3.41626806259959,0,0,0,0,0,1.83491713361816,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,1.29177819672012,1.36564371450887,0,0.0636471582781649,0.202117188958219,1.741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| ||
|short_description=p4@ARHGAP9 | |||
}} | }} |
Latest revision as of 14:43, 19 September 2015
Short description: | p4@ARHGAP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGAP9_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 0bp_to_ENST00000356411, ENST00000393791, ENST00000423291, ENST00000552249, NM_032496, uc001soc.2, uc010sro.1_5end |
EntrezGene: | ARHGAP9 |
HGNC: | 14130 |
UniProt: | Q9BRR9E9PD79F8VSD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.59e-19 | 98 |
blood island | 1.59e-19 | 98 |
hemolymphoid system | 1.05e-18 | 108 |
immune system | 1.93e-11 | 93 |
blood | 3.82e-11 | 15 |
haemolymphatic fluid | 3.82e-11 | 15 |
organism substance | 3.82e-11 | 15 |
connective tissue | 4.01e-09 | 371 |
bone marrow | 2.59e-08 | 76 |
hemopoietic organ | 1.82e-07 | 7 |
immune organ | 1.82e-07 | 7 |
bone element | 3.20e-07 | 82 |